RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 PLEKHH1Q9ULM0 1364 aa23.27■■□□□ 1.32
PTPN6-204ENST00000456013 WDR43Q15061 677 aaKnown RBP eCLIP23.27■■□□□ 1.32
PTPN6-204ENST00000456013 TRAPPC8Q9Y2L5 1435 aa23.26■■□□□ 1.31
PTPN6-204ENST00000456013 MYOM1P52179 1685 aa23.26■■□□□ 1.31
PTPN6-204ENST00000456013 ASXL1Q8IXJ9 1541 aa23.26■■□□□ 1.31
PTPN6-204ENST00000456013 ZNF521Q96K83 1311 aa23.26■■□□□ 1.31
PTPN6-204ENST00000456013 DUSP27Q5VZP5 1158 aa23.26■■□□□ 1.31
PTPN6-204ENST00000456013 PIK3C2GO75747 1445 aa23.25■■□□□ 1.31
PTPN6-204ENST00000456013 PTPRTO14522 1441 aa23.24■■□□□ 1.31
PTPN6-204ENST00000456013 KDM2BQ8NHM5 1336 aa23.24■■□□□ 1.31
PTPN6-204ENST00000456013 C20orf194Q5TEA3 1177 aa23.24■■□□□ 1.31
PTPN6-204ENST00000456013 CLTCL1P53675 1640 aa23.24■■□□□ 1.31
PTPN6-204ENST00000456013 DEPDC5O75140 1603 aa23.23■■□□□ 1.31
PTPN6-204ENST00000456013 RTEL1-TNFRSF6BF6WH68 1400 aa23.23■■□□□ 1.31
PTPN6-204ENST00000456013 KIAA1210Q9ULL0 1709 aa23.23■■□□□ 1.31
PTPN6-204ENST00000456013 NPC1L1Q9UHC9 1359 aa23.23■■□□□ 1.31
PTPN6-204ENST00000456013 GOLGA2Q08379 1002 aa23.21■■□□□ 1.31
PTPN6-204ENST00000456013 TET3O43151 1660 aa23.21■■□□□ 1.31
PTPN6-204ENST00000456013 USP35Q9P2H5 1018 aa23.2■■□□□ 1.3
PTPN6-204ENST00000456013 ZFYVE16Q7Z3T8 1539 aa23.2■■□□□ 1.3
PTPN6-204ENST00000456013 KDM5AP29375 1690 aaKnown RBP23.19■■□□□ 1.3
PTPN6-204ENST00000456013 UHRF1BP1LA0JNW5 1464 aa23.19■■□□□ 1.3
PTPN6-204ENST00000456013 CENPQQ7L2Z9 268 aaPredicted RBP23.19■■□□□ 1.3
PTPN6-204ENST00000456013 DDRGK1Q96HY6 314 aa23.19■■□□□ 1.3
PTPN6-204ENST00000456013 SKAP1Q86WV1 359 aa23.18■■□□□ 1.3
PTPN6-204ENST00000456013 SPAG9O60271 1321 aaKnown RBP23.18■■□□□ 1.3
PTPN6-204ENST00000456013 ARAP3Q8WWN8 1544 aa23.18■■□□□ 1.3
PTPN6-204ENST00000456013 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.18■■□□□ 1.3
PTPN6-204ENST00000456013 EIF3AQ14152 1382 aaKnown RBP23.17■■□□□ 1.3
PTPN6-204ENST00000456013 NEURL4Q96JN8 1562 aa23.17■■□□□ 1.3
PTPN6-204ENST00000456013 PPM1GO15355 546 aaPredicted RBP23.16■■□□□ 1.3
PTPN6-204ENST00000456013 SLFN5Q08AF3 891 aa23.16■■□□□ 1.3
PTPN6-204ENST00000456013 LAS1LQ9Y4W2 734 aaKnown RBP23.15■■□□□ 1.3
PTPN6-204ENST00000456013 TRMT2AQ8IZ69 625 aaKnown RBP23.14■■□□□ 1.3
PTPN6-204ENST00000456013 VWDEQ8N2E2 1590 aa23.14■■□□□ 1.29
PTPN6-204ENST00000456013 NEFMP07197 916 aa23.13■■□□□ 1.29
PTPN6-204ENST00000456013 AFAP1Q8N556 730 aa23.1■■□□□ 1.29
PTPN6-204ENST00000456013 SLC24A1O60721 1099 aa23.09■■□□□ 1.29
PTPN6-204ENST00000456013 MAP3K4Q9Y6R4 1608 aa23.09■■□□□ 1.29
PTPN6-204ENST00000456013 KANK1Q14678 1352 aa23.09■■□□□ 1.29
PTPN6-204ENST00000456013 INO80Q9ULG1 1556 aaPredicted RBP23.09■■□□□ 1.29
PTPN6-204ENST00000456013 NKTRP30414 1462 aaKnown RBP23.08■■□□□ 1.29
PTPN6-204ENST00000456013 MYOM2P54296 1465 aa23.07■■□□□ 1.28
PTPN6-204ENST00000456013 FAM161AQ3B820 660 aa23.07■■□□□ 1.28
PTPN6-204ENST00000456013 ERVK-7P63135 1459 aa23.07■■□□□ 1.28
PTPN6-204ENST00000456013 ABCA6Q8N139 1617 aa23.07■■□□□ 1.28
PTPN6-204ENST00000456013 ATP7AQ04656 1500 aa23.07■■□□□ 1.28
PTPN6-204ENST00000456013 CCDC146Q8IYE0 955 aa23.06■■□□□ 1.28
PTPN6-204ENST00000456013 KIF1BO60333 1816 aa23.05■■□□□ 1.28
PTPN6-204ENST00000456013 IFT172Q9UG01 1749 aa23.05■■□□□ 1.28
PTPN6-204ENST00000456013 APAF1O14727 1248 aa23.04■■□□□ 1.28
PTPN6-204ENST00000456013 C8orf34Q49A92 452 aa23.04■■□□□ 1.28
PTPN6-204ENST00000456013 NGEFQ8N5V2 710 aa23.04■■□□□ 1.28
PTPN6-204ENST00000456013 SPINK5Q9NQ38 1064 aaPredicted RBP23.03■■□□□ 1.28
PTPN6-204ENST00000456013 ABCA9Q8IUA7 1624 aa23.03■■□□□ 1.28
PTPN6-204ENST00000456013 E9PSI1 815 aa23.03■■□□□ 1.28
PTPN6-204ENST00000456013 MYO3AQ8NEV4 1616 aa23.02■■□□□ 1.28
PTPN6-204ENST00000456013 MROH1Q8NDA8 1641 aa23.01■■□□□ 1.27
PTPN6-204ENST00000456013 CFAP70Q5T0N1 1121 aa23■■□□□ 1.27
PTPN6-204ENST00000456013 CARD14Q9BXL6 1004 aa22.98■■□□□ 1.27
PTPN6-204ENST00000456013 VIRMAQ69YN4 1812 aaKnown RBP22.98■■□□□ 1.27
PTPN6-204ENST00000456013 KIF3BO15066 747 aa22.98■■□□□ 1.27
PTPN6-204ENST00000456013 UGGT1Q9NYU2 1555 aa22.98■■□□□ 1.27
PTPN6-204ENST00000456013 FANCAO15360 1455 aa22.97■■□□□ 1.27
PTPN6-204ENST00000456013 SBNO2Q9Y2G9 1366 aa22.97■■□□□ 1.27
PTPN6-204ENST00000456013 ADGRF5Q8IZF2 1346 aa22.97■■□□□ 1.27
PTPN6-204ENST00000456013 BCAR3O75815 825 aa22.97■■□□□ 1.27
PTPN6-204ENST00000456013 MROH2AA6NES4 1674 aa22.96■■□□□ 1.27
PTPN6-204ENST00000456013 POLR3AO14802 1390 aaPredicted RBP22.96■■□□□ 1.27
PTPN6-204ENST00000456013 NRXN1Q9ULB1 1477 aa22.96■■□□□ 1.27
PTPN6-204ENST00000456013 EFCAB6Q5THR3 1501 aa22.95■■□□□ 1.27
PTPN6-204ENST00000456013 DAXXQ9UER7 740 aaPredicted RBP22.95■■□□□ 1.26
PTPN6-204ENST00000456013 NINLQ9Y2I6 1382 aa22.94■■□□□ 1.26
PTPN6-204ENST00000456013 RGS3P49796 1198 aa22.93■■□□□ 1.26
PTPN6-204ENST00000456013 PDE3AQ14432 1141 aa22.93■■□□□ 1.26
PTPN6-204ENST00000456013 NFKBIBQ15653 356 aa22.92■■□□□ 1.26
PTPN6-204ENST00000456013 DMRT2Q9Y5R5 561 aa22.92■■□□□ 1.26
PTPN6-204ENST00000456013 SETBP1Q9Y6X0 1596 aa22.92■■□□□ 1.26
PTPN6-204ENST00000456013 SLC4A3P48751 1232 aa22.92■■□□□ 1.26
PTPN6-204ENST00000456013 SHPRHQ149N8 1683 aa22.92■■□□□ 1.26
PTPN6-204ENST00000456013 CGNL1Q0VF96 1302 aa22.92■■□□□ 1.26
PTPN6-204ENST00000456013 ADGRL1O94910 1474 aa22.91■■□□□ 1.26
PTPN6-204ENST00000456013 PPRC1Q5VV67 1664 aaKnown RBP22.9■■□□□ 1.26
PTPN6-204ENST00000456013 ZC3H13Q5T200 1668 aaKnown RBP22.89■■□□□ 1.25
PTPN6-204ENST00000456013 WWC1Q8IX03 1113 aa22.89■■□□□ 1.25
PTPN6-204ENST00000456013 LMTK2Q8IWU2 1503 aa22.88■■□□□ 1.25
PTPN6-204ENST00000456013 CENPJQ9HC77 1338 aaPredicted RBP22.88■■□□□ 1.25
PTPN6-204ENST00000456013 IGHDP01880 384 aa22.87■■□□□ 1.25
PTPN6-204ENST00000456013 ADGRB3O60242 1522 aa22.86■■□□□ 1.25
PTPN6-204ENST00000456013 KIDINS220Q9ULH0 1771 aa22.86■■□□□ 1.25
PTPN6-204ENST00000456013 GSE1Q14687 1217 aa22.85■■□□□ 1.25
PTPN6-204ENST00000456013 QRICH2Q9H0J4 1663 aa22.84■■□□□ 1.25
PTPN6-204ENST00000456013 CLUAP1Q96AJ1 413 aa22.84■■□□□ 1.25
PTPN6-204ENST00000456013 NSD3Q9BZ95 1437 aa22.84■■□□□ 1.25
PTPN6-204ENST00000456013 PPLO60437 1756 aa22.84■■□□□ 1.25
PTPN6-204ENST00000456013 NOS1P29475 1434 aa22.84■■□□□ 1.25
PTPN6-204ENST00000456013 IL27Q8NEV9 243 aa22.83■■□□□ 1.25
PTPN6-204ENST00000456013 USP32Q8NFA0 1604 aa22.83■■□□□ 1.25
PTPN6-204ENST00000456013 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
PTPN6-204ENST00000456013 IQSEC2Q5JU85 1478 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms