RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 IDI1Q13907 227 aa13.82□□□□□ -0.2
CHCHD4P3-201ENST00000455954 SLC52A1Q9NWF4 448 aa13.82□□□□□ -0.2
CHCHD4P3-201ENST00000455954 STAG3Q9UJ98 1225 aa13.82□□□□□ -0.2
CHCHD4P3-201ENST00000455954 LTBP4Q8N2S1 1624 aa13.82□□□□□ -0.2
CHCHD4P3-201ENST00000455954 NUP155O75694 1391 aa13.82□□□□□ -0.2
CHCHD4P3-201ENST00000455954 UBR1Q8IWV7 1749 aa13.81□□□□□ -0.2
CHCHD4P3-201ENST00000455954 NEURL4Q96JN8 1562 aa13.81□□□□□ -0.2
CHCHD4P3-201ENST00000455954 ZNF335Q9H4Z2 1342 aaPredicted RBP13.81□□□□□ -0.2
CHCHD4P3-201ENST00000455954 MED14O60244 1454 aa13.8□□□□□ -0.2
CHCHD4P3-201ENST00000455954 NPHP4O75161 1426 aaPredicted RBP13.8□□□□□ -0.2
CHCHD4P3-201ENST00000455954 SYNMO15061 1565 aa13.79□□□□□ -0.2
CHCHD4P3-201ENST00000455954 PIK3C2BO00750 1634 aa13.79□□□□□ -0.2
CHCHD4P3-201ENST00000455954 IQGAP3Q86VI3 1631 aa13.79□□□□□ -0.2
CHCHD4P3-201ENST00000455954 TXNDC2Q86VQ3 553 aa13.78□□□□□ -0.2
CHCHD4P3-201ENST00000455954 EID1Q9Y6B2 187 aa13.78□□□□□ -0.2
CHCHD4P3-201ENST00000455954 ARHGAP23Q9P227 1491 aa13.78□□□□□ -0.2
CHCHD4P3-201ENST00000455954 SLIT1O75093 1534 aa13.78□□□□□ -0.2
CHCHD4P3-201ENST00000455954 KDM5AP29375 1690 aaKnown RBP13.78□□□□□ -0.2
CHCHD4P3-201ENST00000455954 LTKP29376 864 aa13.77□□□□□ -0.21
CHCHD4P3-201ENST00000455954 TMEM2Q9UHN6 1383 aa13.77□□□□□ -0.21
CHCHD4P3-201ENST00000455954 IQSEC2Q5JU85 1478 aa13.76□□□□□ -0.21
CHCHD4P3-201ENST00000455954 SCAF11Q99590 1463 aaKnown RBP13.76□□□□□ -0.21
CHCHD4P3-201ENST00000455954 E9PCH4 1651 aa13.75□□□□□ -0.21
CHCHD4P3-201ENST00000455954 TRIM52Q96A61 297 aa13.75□□□□□ -0.21
CHCHD4P3-201ENST00000455954 IQGAP1P46940 1657 aa13.75□□□□□ -0.21
CHCHD4P3-201ENST00000455954 ADGRB3O60242 1522 aa13.74□□□□□ -0.21
CHCHD4P3-201ENST00000455954 PPP4R2Q9NY27 417 aa13.73□□□□□ -0.21
CHCHD4P3-201ENST00000455954 HDGFP51858 240 aaKnown RBP13.72□□□□□ -0.21
CHCHD4P3-201ENST00000455954 CPS1P31327 1500 aa13.72□□□□□ -0.21
CHCHD4P3-201ENST00000455954 CHGAP10645 457 aaKnown RBP13.7□□□□□ -0.22
CHCHD4P3-201ENST00000455954 HNRNPUQ00839 825 aaKnown RBP eCLIP13.7□□□□□ -0.22
CHCHD4P3-201ENST00000455954 TMEM131LA2VDJ0 1609 aa13.69□□□□□ -0.22
CHCHD4P3-201ENST00000455954 ERICH6Q7L0X2 663 aa13.69□□□□□ -0.22
CHCHD4P3-201ENST00000455954 ZBED9Q6R2W3 1325 aa13.67□□□□□ -0.22
CHCHD4P3-201ENST00000455954 ZFYVE9O95405 1425 aa13.67□□□□□ -0.22
CHCHD4P3-201ENST00000455954 RIMS2Q9UQ26 1411 aa13.67□□□□□ -0.22
CHCHD4P3-201ENST00000455954 MSH5O43196 834 aa13.67□□□□□ -0.22
CHCHD4P3-201ENST00000455954 EIF4G2P78344 907 aaKnown RBP eCLIP13.67□□□□□ -0.22
CHCHD4P3-201ENST00000455954 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.67□□□□□ -0.22
CHCHD4P3-201ENST00000455954 WASHC2AQ641Q2 1341 aa13.66□□□□□ -0.22
CHCHD4P3-201ENST00000455954 UBAP1LF5GYI3 381 aa13.66□□□□□ -0.22
CHCHD4P3-201ENST00000455954 SLC4A1APQ9BWU0 796 aaKnown RBP13.66□□□□□ -0.22
CHCHD4P3-201ENST00000455954 SPHKAPQ2M3C7 1700 aa13.65□□□□□ -0.22
CHCHD4P3-201ENST00000455954 HSPA5P11021 654 aaKnown RBP13.65□□□□□ -0.22
CHCHD4P3-201ENST00000455954 SLC26A8Q96RN1 970 aa13.65□□□□□ -0.22
CHCHD4P3-201ENST00000455954 CCDC7Q96M83 1385 aa13.65□□□□□ -0.22
CHCHD4P3-201ENST00000455954 MYO5BQ9ULV0 1848 aa13.64□□□□□ -0.23
CHCHD4P3-201ENST00000455954 PLEKHG1Q9ULL1 1385 aa13.64□□□□□ -0.23
CHCHD4P3-201ENST00000455954 TOM1O60784 492 aa13.63□□□□□ -0.23
CHCHD4P3-201ENST00000455954 LRRC7Q96NW7 1537 aa13.63□□□□□ -0.23
CHCHD4P3-201ENST00000455954 STRCP1A6NGW2 1772 aa13.63□□□□□ -0.23
CHCHD4P3-201ENST00000455954 KCNA6P17658 529 aa13.62□□□□□ -0.23
CHCHD4P3-201ENST00000455954 HIRIP3Q9BW71 556 aaPredicted RBP13.62□□□□□ -0.23
CHCHD4P3-201ENST00000455954 TRPM2O94759 1503 aa13.62□□□□□ -0.23
CHCHD4P3-201ENST00000455954 ZNF326Q5BKZ1 582 aaKnown RBP13.61□□□□□ -0.23
CHCHD4P3-201ENST00000455954 NUTM2DQ5VT03 806 aaPredicted RBP13.61□□□□□ -0.23
CHCHD4P3-201ENST00000455954 TBX22Q9Y458 520 aa13.61□□□□□ -0.23
CHCHD4P3-201ENST00000455954 SMG6Q86US8 1419 aaKnown RBP13.6□□□□□ -0.23
CHCHD4P3-201ENST00000455954 MPHOSPH9Q99550 1183 aa13.6□□□□□ -0.23
CHCHD4P3-201ENST00000455954 SENP3Q9H4L4 574 aaPredicted RBP13.6□□□□□ -0.23
CHCHD4P3-201ENST00000455954 SPATA31E1Q6ZUB1 1445 aa13.59□□□□□ -0.23
CHCHD4P3-201ENST00000455954 PRKRIP1Q9H875 184 aaPredicted RBP13.59□□□□□ -0.23
CHCHD4P3-201ENST00000455954 CLTCL1P53675 1640 aa13.59□□□□□ -0.23
CHCHD4P3-201ENST00000455954 FOXD1Q16676 465 aa13.57□□□□□ -0.24
CHCHD4P3-201ENST00000455954 PROSER2Q86WR7 435 aaPredicted RBP13.57□□□□□ -0.24
CHCHD4P3-201ENST00000455954 ADAMTS13Q76LX8 1427 aa13.56□□□□□ -0.24
CHCHD4P3-201ENST00000455954 PIP4K2BP78356 416 aa13.56□□□□□ -0.24
CHCHD4P3-201ENST00000455954 RNF123Q5XPI4 1314 aa13.56□□□□□ -0.24
CHCHD4P3-201ENST00000455954 ANKRD30BQ9BXX2 1392 aa13.56□□□□□ -0.24
CHCHD4P3-201ENST00000455954 NKTRP30414 1462 aaKnown RBP13.55□□□□□ -0.24
CHCHD4P3-201ENST00000455954 KIF1BO60333 1816 aa13.55□□□□□ -0.24
CHCHD4P3-201ENST00000455954 NWD1Q149M9 1564 aa13.55□□□□□ -0.24
CHCHD4P3-201ENST00000455954 TMEM94Q12767 1356 aa13.55□□□□□ -0.24
CHCHD4P3-201ENST00000455954 PIK3R4Q99570 1358 aa13.55□□□□□ -0.24
CHCHD4P3-201ENST00000455954 DIP2AQ14689 1571 aa13.54□□□□□ -0.24
CHCHD4P3-201ENST00000455954 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
CHCHD4P3-201ENST00000455954 VGFO15240 615 aaPredicted RBP13.53□□□□□ -0.24
CHCHD4P3-201ENST00000455954 CCDC144AA2RUR9 1427 aa13.53□□□□□ -0.24
CHCHD4P3-201ENST00000455954 NEXMIFQ5QGS0 1516 aa13.53□□□□□ -0.24
CHCHD4P3-201ENST00000455954 ALKQ9UM73 1620 aa13.53□□□□□ -0.24
CHCHD4P3-201ENST00000455954 CHD2O14647 1828 aaKnown RBP13.53□□□□□ -0.24
CHCHD4P3-201ENST00000455954 SETBP1Q9Y6X0 1596 aa13.52□□□□□ -0.25
CHCHD4P3-201ENST00000455954 XIRP1Q702N8 1843 aaKnown RBP13.52□□□□□ -0.25
CHCHD4P3-201ENST00000455954 RBM33Q96EV2 1170 aaKnown RBP13.51□□□□□ -0.25
CHCHD4P3-201ENST00000455954 MRS2Q9HD23 443 aa13.51□□□□□ -0.25
CHCHD4P3-201ENST00000455954 ROCK2O75116 1388 aaKnown RBP13.5□□□□□ -0.25
CHCHD4P3-201ENST00000455954 KTN1Q86UP2 1357 aaKnown RBP13.5□□□□□ -0.25
CHCHD4P3-201ENST00000455954 L3MBTL2Q969R5 705 aa13.5□□□□□ -0.25
CHCHD4P3-201ENST00000455954 AMOTL2Q9Y2J4 779 aa13.5□□□□□ -0.25
CHCHD4P3-201ENST00000455954 NRXN3Q9Y4C0 1643 aa13.5□□□□□ -0.25
CHCHD4P3-201ENST00000455954 NCOA3Q9Y6Q9 1424 aa13.49□□□□□ -0.25
CHCHD4P3-201ENST00000455954 HSPA1LP34931 641 aa13.49□□□□□ -0.25
CHCHD4P3-201ENST00000455954 NOP58Q9Y2X3 529 aaKnown RBP13.49□□□□□ -0.25
CHCHD4P3-201ENST00000455954 MSH6P52701 1360 aa13.48□□□□□ -0.25
CHCHD4P3-201ENST00000455954 PTPRUQ92729 1446 aa13.47□□□□□ -0.25
CHCHD4P3-201ENST00000455954 METP08581 1390 aa13.47□□□□□ -0.25
CHCHD4P3-201ENST00000455954 KIF7Q2M1P5 1343 aa13.47□□□□□ -0.25
CHCHD4P3-201ENST00000455954 RGL3Q3MIN7 710 aa13.47□□□□□ -0.25
CHCHD4P3-201ENST00000455954 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
CHCHD4P3-201ENST00000455954 IRX6P78412 446 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms