RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 SAFB2Q14151 953 aaKnown RBP eCLIP18.43■□□□□ 0.54
CLK3-203ENST00000454830 ABCA6Q8N139 1617 aa18.43■□□□□ 0.54
CLK3-203ENST00000454830 VWDEQ8N2E2 1590 aa18.43■□□□□ 0.54
CLK3-203ENST00000454830 PPRC1Q5VV67 1664 aaKnown RBP18.42■□□□□ 0.54
CLK3-203ENST00000454830 IDI1Q13907 227 aa18.41■□□□□ 0.54
CLK3-203ENST00000454830 FBXO31Q5XUX0 539 aaPredicted RBP18.41■□□□□ 0.54
CLK3-203ENST00000454830 SCAF11Q99590 1463 aaKnown RBP18.41■□□□□ 0.54
CLK3-203ENST00000454830 STK26Q9P289 416 aa18.41■□□□□ 0.54
CLK3-203ENST00000454830 COL17A1Q9UMD9 1497 aaPredicted RBP18.41■□□□□ 0.54
CLK3-203ENST00000454830 FRMPD1Q5SYB0 1578 aa18.41■□□□□ 0.54
CLK3-203ENST00000454830 PLPPR3Q6T4P5 718 aa18.4■□□□□ 0.54
CLK3-203ENST00000454830 NLRP13Q86W25 1043 aa18.4■□□□□ 0.54
CLK3-203ENST00000454830 PNISRQ8TF01 805 aaKnown RBP18.39■□□□□ 0.53
CLK3-203ENST00000454830 RNF17Q9BXT8 1623 aaKnown RBP18.39■□□□□ 0.53
CLK3-203ENST00000454830 ZBED9Q6R2W3 1325 aa18.39■□□□□ 0.53
CLK3-203ENST00000454830 MADDQ8WXG6 1647 aa18.38■□□□□ 0.53
CLK3-203ENST00000454830 VGFO15240 615 aaPredicted RBP18.38■□□□□ 0.53
CLK3-203ENST00000454830 KIF1BO60333 1816 aa18.37■□□□□ 0.53
CLK3-203ENST00000454830 PER1O15534 1290 aaPredicted RBP18.37■□□□□ 0.53
CLK3-203ENST00000454830 ABCC3O15438 1527 aa18.37■□□□□ 0.53
CLK3-203ENST00000454830 DIP2CQ9Y2E4 1556 aa18.36■□□□□ 0.53
CLK3-203ENST00000454830 CENPJQ9HC77 1338 aaPredicted RBP18.36■□□□□ 0.53
CLK3-203ENST00000454830 BRD4O60885 1362 aaPredicted RBP18.34■□□□□ 0.53
CLK3-203ENST00000454830 MAP3K4Q9Y6R4 1608 aa18.34■□□□□ 0.53
CLK3-203ENST00000454830 SLC52A1Q9NWF4 448 aa18.33■□□□□ 0.53
CLK3-203ENST00000454830 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.53
CLK3-203ENST00000454830 RPGRIP1LQ68CZ1 1315 aa18.32■□□□□ 0.52
CLK3-203ENST00000454830 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
CLK3-203ENST00000454830 DIP2BQ9P265 1576 aa18.31■□□□□ 0.52
CLK3-203ENST00000454830 SLC24A1O60721 1099 aa18.31■□□□□ 0.52
CLK3-203ENST00000454830 TNNT2P45379 298 aaPredicted RBP18.3■□□□□ 0.52
CLK3-203ENST00000454830 RICTORQ6R327 1708 aa18.3■□□□□ 0.52
CLK3-203ENST00000454830 TRHP20396 242 aaPredicted RBP18.3■□□□□ 0.52
CLK3-203ENST00000454830 LAMC1P11047 1609 aa18.29■□□□□ 0.52
CLK3-203ENST00000454830 WDR43Q15061 677 aaKnown RBP eCLIP18.29■□□□□ 0.52
CLK3-203ENST00000454830 GLI2P10070 1586 aa18.29■□□□□ 0.52
CLK3-203ENST00000454830 PARD3Q8TEW0 1356 aa18.28■□□□□ 0.52
CLK3-203ENST00000454830 MYOM2P54296 1465 aa18.28■□□□□ 0.52
CLK3-203ENST00000454830 MROH2AA6NES4 1674 aa18.28■□□□□ 0.52
CLK3-203ENST00000454830 POGKQ9P215 609 aa18.28■□□□□ 0.52
CLK3-203ENST00000454830 CAMSAP1Q5T5Y3 1602 aa18.26■□□□□ 0.51
CLK3-203ENST00000454830 SLC12A5Q9H2X9 1139 aa18.26■□□□□ 0.51
CLK3-203ENST00000454830 ADGRB3O60242 1522 aa18.25■□□□□ 0.51
CLK3-203ENST00000454830 SRPK2P78362 688 aaKnown RBP18.25■□□□□ 0.51
CLK3-203ENST00000454830 PPP2R1AP30153 589 aa18.24■□□□□ 0.51
CLK3-203ENST00000454830 NUDCQ9Y266 331 aa18.24■□□□□ 0.51
CLK3-203ENST00000454830 MINK1Q8N4C8 1332 aaPredicted RBP18.23■□□□□ 0.51
CLK3-203ENST00000454830 IQGAP1P46940 1657 aa18.23■□□□□ 0.51
CLK3-203ENST00000454830 AMER1Q5JTC6 1135 aaPredicted RBP18.22■□□□□ 0.51
CLK3-203ENST00000454830 CABP2Q9NPB3 220 aa18.22■□□□□ 0.51
CLK3-203ENST00000454830 PIK3C2GO75747 1445 aa18.21■□□□□ 0.51
CLK3-203ENST00000454830 EVC2Q86UK5 1308 aa18.2■□□□□ 0.5
CLK3-203ENST00000454830 ADAMTS8Q9UP79 889 aa18.19■□□□□ 0.5
CLK3-203ENST00000454830 MORC1Q86VD1 984 aa18.19■□□□□ 0.5
CLK3-203ENST00000454830 ARHGAP31Q2M1Z3 1444 aa18.19■□□□□ 0.5
CLK3-203ENST00000454830 SYNMO15061 1565 aa18.18■□□□□ 0.5
CLK3-203ENST00000454830 CARD14Q9BXL6 1004 aa18.18■□□□□ 0.5
CLK3-203ENST00000454830 ERVK-7P63135 1459 aa18.18■□□□□ 0.5
CLK3-203ENST00000454830 SIGLEC1Q9BZZ2 1709 aa18.18■□□□□ 0.5
CLK3-203ENST00000454830 PRAM1Q96QH2 718 aa18.18■□□□□ 0.5
CLK3-203ENST00000454830 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
CLK3-203ENST00000454830 LRPPRCP42704 1394 aaKnown RBP18.16■□□□□ 0.5
CLK3-203ENST00000454830 NEURL4Q96JN8 1562 aa18.15■□□□□ 0.5
CLK3-203ENST00000454830 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
CLK3-203ENST00000454830 KIAA1210Q9ULL0 1709 aa18.14■□□□□ 0.5
CLK3-203ENST00000454830 B4GALNT3Q6L9W6 998 aa18.14■□□□□ 0.5
CLK3-203ENST00000454830 CDCA7LQ96GN5 454 aa18.14■□□□□ 0.5
CLK3-203ENST00000454830 ZMYM4Q5VZL5 1548 aa18.14■□□□□ 0.49
CLK3-203ENST00000454830 NRXN1Q9ULB1 1477 aa18.14■□□□□ 0.49
CLK3-203ENST00000454830 KDM5AP29375 1690 aaKnown RBP18.14■□□□□ 0.49
CLK3-203ENST00000454830 ASXL1Q8IXJ9 1541 aa18.14■□□□□ 0.49
CLK3-203ENST00000454830 PPLO60437 1756 aa18.13■□□□□ 0.49
CLK3-203ENST00000454830 NSD3Q9BZ95 1437 aa18.13■□□□□ 0.49
CLK3-203ENST00000454830 SMG6Q86US8 1419 aaKnown RBP18.12■□□□□ 0.49
CLK3-203ENST00000454830 CEBPAP49715 358 aaPredicted RBP18.11■□□□□ 0.49
CLK3-203ENST00000454830 PPP4R2Q9NY27 417 aa18.11■□□□□ 0.49
CLK3-203ENST00000454830 IFT172Q9UG01 1749 aa18.11■□□□□ 0.49
CLK3-203ENST00000454830 ZMYM3Q14202 1370 aa18.1■□□□□ 0.49
CLK3-203ENST00000454830 ZC3H13Q5T200 1668 aaKnown RBP18.1■□□□□ 0.49
CLK3-203ENST00000454830 NEXMIFQ5QGS0 1516 aa18.1■□□□□ 0.49
CLK3-203ENST00000454830 WAPLQ7Z5K2 1190 aa18.1■□□□□ 0.49
CLK3-203ENST00000454830 PIK3C2BO00750 1634 aa18.09■□□□□ 0.49
CLK3-203ENST00000454830 PREX1Q8TCU6 1659 aa18.09■□□□□ 0.49
CLK3-203ENST00000454830 CGNL1Q0VF96 1302 aa18.09■□□□□ 0.49
CLK3-203ENST00000454830 SBNO2Q9Y2G9 1366 aa18.08■□□□□ 0.49
CLK3-203ENST00000454830 NEUROD2Q15784 382 aa18.08■□□□□ 0.49
CLK3-203ENST00000454830 CLTCQ00610 1675 aaKnown RBP18.08■□□□□ 0.49
CLK3-203ENST00000454830 RCAN3Q9UKA8 241 aa18.08■□□□□ 0.48
CLK3-203ENST00000454830 ADGRB1O14514 1584 aa18.06■□□□□ 0.48
CLK3-203ENST00000454830 SETBP1Q9Y6X0 1596 aa18.06■□□□□ 0.48
CLK3-203ENST00000454830 HDGFP51858 240 aaKnown RBP18.06■□□□□ 0.48
CLK3-203ENST00000454830 TSHZ2Q9NRE2 1034 aa18.06■□□□□ 0.48
CLK3-203ENST00000454830 RIMS2Q9UQ26 1411 aa18.06■□□□□ 0.48
CLK3-203ENST00000454830 MYO5BQ9ULV0 1848 aa18.05■□□□□ 0.48
CLK3-203ENST00000454830 APAF1O14727 1248 aa18.05■□□□□ 0.48
CLK3-203ENST00000454830 PDE3BQ13370 1112 aa18.05■□□□□ 0.48
CLK3-203ENST00000454830 TXNDC2Q86VQ3 553 aa18.05■□□□□ 0.48
CLK3-203ENST00000454830 CCDC136Q96JN2 1154 aa18.05■□□□□ 0.48
CLK3-203ENST00000454830 CDK19Q9BWU1 502 aa18.05■□□□□ 0.48
CLK3-203ENST00000454830 GGNBP2Q9H3C7 697 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms