RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 BCORL1Q5H9F3 1711 aa14.53□□□□□ -0.08
DDR1-240ENST00000454612 NUTM2FA1L443 756 aa14.53□□□□□ -0.08
DDR1-240ENST00000454612 PDE4AP27815 886 aa14.52□□□□□ -0.09
DDR1-240ENST00000454612 TSPOAP1O95153 1857 aa14.51□□□□□ -0.09
DDR1-240ENST00000454612 ABCA9Q8IUA7 1624 aa14.51□□□□□ -0.09
DDR1-240ENST00000454612 U2AF1L5P0DN76 240 aaPredicted RBP14.51□□□□□ -0.09
DDR1-240ENST00000454612 U2AF1Q01081 240 aaKnown RBP eCLIP14.51□□□□□ -0.09
DDR1-240ENST00000454612 C20orf194Q5TEA3 1177 aa14.51□□□□□ -0.09
DDR1-240ENST00000454612 POGKQ9P215 609 aa14.5□□□□□ -0.09
DDR1-240ENST00000454612 ADGBQ8N7X0 1667 aa14.5□□□□□ -0.09
DDR1-240ENST00000454612 IPO9Q96P70 1041 aaKnown RBP14.49□□□□□ -0.09
DDR1-240ENST00000454612 GOLGA2Q08379 1002 aa14.49□□□□□ -0.09
DDR1-240ENST00000454612 CDCA8Q53HL2 280 aa14.49□□□□□ -0.09
DDR1-240ENST00000454612 TCERG1O14776 1098 aaKnown RBP14.48□□□□□ -0.09
DDR1-240ENST00000454612 SLKQ9H2G2 1235 aaPredicted RBP14.48□□□□□ -0.09
DDR1-240ENST00000454612 COG6Q9Y2V7 657 aa14.48□□□□□ -0.09
DDR1-240ENST00000454612 ARHGEF12Q9NZN5 1544 aa14.48□□□□□ -0.09
DDR1-240ENST00000454612 ABCC1P33527 1531 aa14.48□□□□□ -0.09
DDR1-240ENST00000454612 CROCC2H7BZ55 1655 aa14.48□□□□□ -0.09
DDR1-240ENST00000454612 ESF1Q9H501 851 aaKnown RBP14.47□□□□□ -0.09
DDR1-240ENST00000454612 ZBTB7CA1YPR0 619 aa14.47□□□□□ -0.09
DDR1-240ENST00000454612 ELL2O00472 640 aaPredicted RBP14.47□□□□□ -0.09
DDR1-240ENST00000454612 SHANK2Q9UPX8 1470 aa14.46□□□□□ -0.09
DDR1-240ENST00000454612 ARHGEF5Q12774 1597 aa14.46□□□□□ -0.09
DDR1-240ENST00000454612 KDM5CP41229 1560 aa14.46□□□□□ -0.09
DDR1-240ENST00000454612 ARID4BQ4LE39 1312 aaPredicted RBP14.46□□□□□ -0.1
DDR1-240ENST00000454612 ERICH6BQ5W0A0 696 aa14.45□□□□□ -0.1
DDR1-240ENST00000454612 FTSJ3Q8IY81 847 aaKnown RBP14.45□□□□□ -0.1
DDR1-240ENST00000454612 UHRF1BP1Q6BDS2 1440 aa14.45□□□□□ -0.1
DDR1-240ENST00000454612 BCAR3O75815 825 aa14.45□□□□□ -0.1
DDR1-240ENST00000454612 ZNF518AQ6AHZ1 1483 aa14.45□□□□□ -0.1
DDR1-240ENST00000454612 RALGAPBQ86X10 1494 aa14.45□□□□□ -0.1
DDR1-240ENST00000454612 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.44□□□□□ -0.1
DDR1-240ENST00000454612 IL27Q8NEV9 243 aa14.44□□□□□ -0.1
DDR1-240ENST00000454612 SLC12A5Q9H2X9 1139 aa14.44□□□□□ -0.1
DDR1-240ENST00000454612 PANK1Q8TE04 598 aa14.43□□□□□ -0.1
DDR1-240ENST00000454612 ARAP3Q8WWN8 1544 aa14.43□□□□□ -0.1
DDR1-240ENST00000454612 WASHC2CQ9Y4E1 1318 aa14.43□□□□□ -0.1
DDR1-240ENST00000454612 KANK1Q14678 1352 aa14.43□□□□□ -0.1
DDR1-240ENST00000454612 APBB1O00213 710 aa14.42□□□□□ -0.1
DDR1-240ENST00000454612 HSP90AA1P07900 732 aaKnown RBP14.42□□□□□ -0.1
DDR1-240ENST00000454612 TPRNQ4KMQ1 711 aa14.42□□□□□ -0.1
DDR1-240ENST00000454612 NEO1Q92859 1461 aa14.42□□□□□ -0.1
DDR1-240ENST00000454612 CFAP74Q9C0B2 1584 aa14.42□□□□□ -0.1
DDR1-240ENST00000454612 CFAP53Q96M91 514 aa14.41□□□□□ -0.1
DDR1-240ENST00000454612 DIP2BQ9P265 1576 aa14.41□□□□□ -0.1
DDR1-240ENST00000454612 SMG6Q86US8 1419 aaKnown RBP14.41□□□□□ -0.1
DDR1-240ENST00000454612 PPP2R1AP30153 589 aa14.41□□□□□ -0.1
DDR1-240ENST00000454612 UPF2Q9HAU5 1272 aaKnown RBP14.4□□□□□ -0.1
DDR1-240ENST00000454612 MINK1Q8N4C8 1332 aaPredicted RBP14.4□□□□□ -0.1
DDR1-240ENST00000454612 POGZQ7Z3K3 1410 aa14.4□□□□□ -0.1
DDR1-240ENST00000454612 C14orf37Q86TY3 774 aa14.4□□□□□ -0.1
DDR1-240ENST00000454612 FAM135AQ9P2D6 1515 aa14.4□□□□□ -0.1
DDR1-240ENST00000454612 ATP7AQ04656 1500 aa14.39□□□□□ -0.11
DDR1-240ENST00000454612 POLR1AO95602 1720 aaPredicted RBP14.39□□□□□ -0.11
DDR1-240ENST00000454612 CABP2Q9NPB3 220 aa14.39□□□□□ -0.11
DDR1-240ENST00000454612 VSIG10Q8N0Z9 540 aa14.38□□□□□ -0.11
DDR1-240ENST00000454612 MAPK8IP3Q9UPT6 1336 aa14.38□□□□□ -0.11
DDR1-240ENST00000454612 GGNBP2Q9H3C7 697 aa14.37□□□□□ -0.11
DDR1-240ENST00000454612 PLA2R1Q13018 1463 aa14.37□□□□□ -0.11
DDR1-240ENST00000454612 DUOX2Q9NRD8 1548 aa14.37□□□□□ -0.11
DDR1-240ENST00000454612 PKNOX2Q96KN3 472 aa14.37□□□□□ -0.11
DDR1-240ENST00000454612 KDM5DQ9BY66 1539 aa14.36□□□□□ -0.11
DDR1-240ENST00000454612 RTEL1-TNFRSF6BF6WH68 1400 aa14.36□□□□□ -0.11
DDR1-240ENST00000454612 GZF1Q9H116 711 aaPredicted RBP14.36□□□□□ -0.11
DDR1-240ENST00000454612 PRAG1Q86YV5 1406 aa14.36□□□□□ -0.11
DDR1-240ENST00000454612 DISP3Q9P2K9 1392 aa14.35□□□□□ -0.11
DDR1-240ENST00000454612 NAP1L5Q96NT1 182 aaPredicted RBP14.35□□□□□ -0.11
DDR1-240ENST00000454612 GLI2P10070 1586 aa14.34□□□□□ -0.11
DDR1-240ENST00000454612 FBLN1P23142 703 aa14.34□□□□□ -0.11
DDR1-240ENST00000454612 PDE3BQ13370 1112 aa14.34□□□□□ -0.11
DDR1-240ENST00000454612 ZFYVE16Q7Z3T8 1539 aa14.34□□□□□ -0.11
DDR1-240ENST00000454612 ITPRIPQ8IWB1 547 aa14.34□□□□□ -0.11
DDR1-240ENST00000454612 MTHFSP49914 203 aa14.34□□□□□ -0.11
DDR1-240ENST00000454612 PER1O15534 1290 aaPredicted RBP14.33□□□□□ -0.12
DDR1-240ENST00000454612 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
DDR1-240ENST00000454612 ERBINQ96RT1 1412 aa14.33□□□□□ -0.12
DDR1-240ENST00000454612 MAP3K4Q9Y6R4 1608 aa14.33□□□□□ -0.12
DDR1-240ENST00000454612 A2MP01023 1474 aa14.33□□□□□ -0.12
DDR1-240ENST00000454612 BRD4O60885 1362 aaPredicted RBP14.33□□□□□ -0.12
DDR1-240ENST00000454612 CENPJQ9HC77 1338 aaPredicted RBP14.33□□□□□ -0.12
DDR1-240ENST00000454612 TESK2Q96S53 571 aa14.33□□□□□ -0.12
DDR1-240ENST00000454612 RNF123Q5XPI4 1314 aa14.32□□□□□ -0.12
DDR1-240ENST00000454612 DDRGK1Q96HY6 314 aa14.32□□□□□ -0.12
DDR1-240ENST00000454612 LRPPRCP42704 1394 aaKnown RBP14.32□□□□□ -0.12
DDR1-240ENST00000454612 SMC4Q9NTJ3 1288 aa14.32□□□□□ -0.12
DDR1-240ENST00000454612 MAST1Q9Y2H9 1570 aa14.31□□□□□ -0.12
DDR1-240ENST00000454612 TSR2Q969E8 191 aaKnown RBP14.31□□□□□ -0.12
DDR1-240ENST00000454612 YEATS2Q9ULM3 1422 aa14.31□□□□□ -0.12
DDR1-240ENST00000454612 MFAP1P55081 439 aaKnown RBP14.3□□□□□ -0.12
DDR1-240ENST00000454612 ADGRF5Q8IZF2 1346 aa14.3□□□□□ -0.12
DDR1-240ENST00000454612 HECW2Q9P2P5 1572 aa14.3□□□□□ -0.12
DDR1-240ENST00000454612 PLXNC1O60486 1568 aa14.29□□□□□ -0.12
DDR1-240ENST00000454612 TCP11L2Q8N4U5 519 aa14.29□□□□□ -0.12
DDR1-240ENST00000454612 HMOX1P09601 288 aa14.29□□□□□ -0.12
DDR1-240ENST00000454612 MLH3Q9UHC1 1453 aa14.27□□□□□ -0.12
DDR1-240ENST00000454612 PARD3Q8TEW0 1356 aa14.27□□□□□ -0.12
DDR1-240ENST00000454612 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
DDR1-240ENST00000454612 INO80Q9ULG1 1556 aaPredicted RBP14.26□□□□□ -0.13
DDR1-240ENST00000454612 LMOD2Q6P5Q4 547 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms