RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 MYO3AQ8NEV4 1616 aa18.34■□□□□ 0.53
LINC00343-203ENST00000454555 ANP32EQ9BTT0 268 aa18.34■□□□□ 0.53
LINC00343-203ENST00000454555 SPATA31E1Q6ZUB1 1445 aa18.34■□□□□ 0.53
LINC00343-203ENST00000454555 UHRF1BP1Q6BDS2 1440 aa18.32■□□□□ 0.52
LINC00343-203ENST00000454555 ERICH6BQ5W0A0 696 aa18.32■□□□□ 0.52
LINC00343-203ENST00000454555 KDM5AP29375 1690 aaKnown RBP18.31■□□□□ 0.52
LINC00343-203ENST00000454555 TMEM131LA2VDJ0 1609 aa18.31■□□□□ 0.52
LINC00343-203ENST00000454555 ADGRB3O60242 1522 aa18.31■□□□□ 0.52
LINC00343-203ENST00000454555 CHGAP10645 457 aaKnown RBP18.31■□□□□ 0.52
LINC00343-203ENST00000454555 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
LINC00343-203ENST00000454555 CEP170BQ9Y4F5 1589 aaPredicted RBP18.31■□□□□ 0.52
LINC00343-203ENST00000454555 KIF1BO60333 1816 aa18.3■□□□□ 0.52
LINC00343-203ENST00000454555 ZNF142P52746 1687 aaPredicted RBP18.29■□□□□ 0.52
LINC00343-203ENST00000454555 THEMISQ8N1K5 641 aaPredicted RBP18.29■□□□□ 0.52
LINC00343-203ENST00000454555 RPGRIP1LQ68CZ1 1315 aa18.28■□□□□ 0.52
LINC00343-203ENST00000454555 UBR1Q8IWV7 1749 aa18.27■□□□□ 0.52
LINC00343-203ENST00000454555 RGL3Q3MIN7 710 aa18.27■□□□□ 0.51
LINC00343-203ENST00000454555 POLR1AO95602 1720 aaPredicted RBP18.26■□□□□ 0.51
LINC00343-203ENST00000454555 EIF4G2P78344 907 aaKnown RBP eCLIP18.26■□□□□ 0.51
LINC00343-203ENST00000454555 ZNF326Q5BKZ1 582 aaKnown RBP18.25■□□□□ 0.51
LINC00343-203ENST00000454555 STAC3Q96MF2 364 aa18.25■□□□□ 0.51
LINC00343-203ENST00000454555 HIRIP3Q9BW71 556 aaPredicted RBP18.25■□□□□ 0.51
LINC00343-203ENST00000454555 TMEM2Q9UHN6 1383 aa18.24■□□□□ 0.51
LINC00343-203ENST00000454555 L3MBTL2Q969R5 705 aa18.24■□□□□ 0.51
LINC00343-203ENST00000454555 SLIT1O75093 1534 aa18.23■□□□□ 0.51
LINC00343-203ENST00000454555 LMTK3Q96Q04 1460 aa18.22■□□□□ 0.51
LINC00343-203ENST00000454555 ARHGAP23Q9P227 1491 aa18.22■□□□□ 0.51
LINC00343-203ENST00000454555 HDGFP51858 240 aaKnown RBP18.22■□□□□ 0.51
LINC00343-203ENST00000454555 BCANQ96GW7 911 aa18.22■□□□□ 0.51
LINC00343-203ENST00000454555 ZFYVE9O95405 1425 aa18.21■□□□□ 0.51
LINC00343-203ENST00000454555 MYO5BQ9ULV0 1848 aa18.21■□□□□ 0.51
LINC00343-203ENST00000454555 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.21■□□□□ 0.51
LINC00343-203ENST00000454555 RIMS2Q9UQ26 1411 aa18.21■□□□□ 0.51
LINC00343-203ENST00000454555 NEXMIFQ5QGS0 1516 aa18.2■□□□□ 0.5
LINC00343-203ENST00000454555 HSPA5P11021 654 aaKnown RBP18.2■□□□□ 0.5
LINC00343-203ENST00000454555 DCAF11Q8TEB1 546 aa18.2■□□□□ 0.5
LINC00343-203ENST00000454555 WASHC2AQ641Q2 1341 aa18.2■□□□□ 0.5
LINC00343-203ENST00000454555 VGFO15240 615 aaPredicted RBP18.19■□□□□ 0.5
LINC00343-203ENST00000454555 MYOM2P54296 1465 aa18.17■□□□□ 0.5
LINC00343-203ENST00000454555 EID1Q9Y6B2 187 aa18.17■□□□□ 0.5
LINC00343-203ENST00000454555 PPLO60437 1756 aa18.17■□□□□ 0.5
LINC00343-203ENST00000454555 TXNDC2Q86VQ3 553 aa18.17■□□□□ 0.5
LINC00343-203ENST00000454555 RBM19Q9Y4C8 960 aaKnown RBP18.17■□□□□ 0.5
LINC00343-203ENST00000454555 IFT172Q9UG01 1749 aa18.16■□□□□ 0.5
LINC00343-203ENST00000454555 LTKP29376 864 aa18.16■□□□□ 0.5
LINC00343-203ENST00000454555 HNRNPUQ00839 825 aaKnown RBP eCLIP18.16■□□□□ 0.5
LINC00343-203ENST00000454555 ANKLE2Q86XL3 938 aa18.16■□□□□ 0.5
LINC00343-203ENST00000454555 KDM2AQ9Y2K7 1162 aa18.15■□□□□ 0.5
LINC00343-203ENST00000454555 HSPA2P54652 639 aa18.14■□□□□ 0.5
LINC00343-203ENST00000454555 NUTM2DQ5VT03 806 aaPredicted RBP18.14■□□□□ 0.5
LINC00343-203ENST00000454555 CCDC7Q96M83 1385 aa18.14■□□□□ 0.5
LINC00343-203ENST00000454555 NRXN1Q9ULB1 1477 aa18.14■□□□□ 0.49
LINC00343-203ENST00000454555 ADGRF5Q8IZF2 1346 aa18.14■□□□□ 0.49
LINC00343-203ENST00000454555 SCAF11Q99590 1463 aaKnown RBP18.14■□□□□ 0.49
LINC00343-203ENST00000454555 PLEKHG1Q9ULL1 1385 aa18.12■□□□□ 0.49
LINC00343-203ENST00000454555 PRAG1Q86YV5 1406 aa18.1■□□□□ 0.49
LINC00343-203ENST00000454555 MED14O60244 1454 aa18.1■□□□□ 0.49
LINC00343-203ENST00000454555 PIK3C2GO75747 1445 aa18.1■□□□□ 0.49
LINC00343-203ENST00000454555 NCKAP5LQ9HCH0 1330 aa18.09■□□□□ 0.49
LINC00343-203ENST00000454555 FANCIQ9NVI1 1328 aa18.09■□□□□ 0.49
LINC00343-203ENST00000454555 ZBED9Q6R2W3 1325 aa18.08■□□□□ 0.49
LINC00343-203ENST00000454555 NBPF8Q3BBV2 869 aa18.08■□□□□ 0.48
LINC00343-203ENST00000454555 PRKRIP1Q9H875 184 aaPredicted RBP18.08■□□□□ 0.48
LINC00343-203ENST00000454555 SETBP1Q9Y6X0 1596 aa18.07■□□□□ 0.48
LINC00343-203ENST00000454555 NPHP4O75161 1426 aaPredicted RBP18.07■□□□□ 0.48
LINC00343-203ENST00000454555 C14orf93Q9H972 538 aaKnown RBP18.07■□□□□ 0.48
LINC00343-203ENST00000454555 PPP4R2Q9NY27 417 aa18.06■□□□□ 0.48
LINC00343-203ENST00000454555 ADAMTS13Q76LX8 1427 aa18.04■□□□□ 0.48
LINC00343-203ENST00000454555 CFAP70Q5T0N1 1121 aa18.04■□□□□ 0.48
LINC00343-203ENST00000454555 TBX22Q9Y458 520 aa18.04■□□□□ 0.48
LINC00343-203ENST00000454555 NRXN3Q9Y4C0 1643 aa18.03■□□□□ 0.48
LINC00343-203ENST00000454555 STRCQ7RTU9 1775 aa18.03■□□□□ 0.48
LINC00343-203ENST00000454555 ALKQ9UM73 1620 aa18.02■□□□□ 0.47
LINC00343-203ENST00000454555 KIAA1210Q9ULL0 1709 aa18.01■□□□□ 0.47
LINC00343-203ENST00000454555 LAMC1P11047 1609 aa18.01■□□□□ 0.47
LINC00343-203ENST00000454555 IQGAP1P46940 1657 aa18.01■□□□□ 0.47
LINC00343-203ENST00000454555 SLC26A8Q96RN1 970 aa18■□□□□ 0.47
LINC00343-203ENST00000454555 DMRT2Q9Y5R5 561 aa18■□□□□ 0.47
LINC00343-203ENST00000454555 DIP2AQ14689 1571 aa18■□□□□ 0.47
LINC00343-203ENST00000454555 RALGAPBQ86X10 1494 aa17.99■□□□□ 0.47
LINC00343-203ENST00000454555 TRPM1Q7Z4N2 1603 aa17.99■□□□□ 0.47
LINC00343-203ENST00000454555 PIAS4Q8N2W9 510 aaPredicted RBP17.99■□□□□ 0.47
LINC00343-203ENST00000454555 NBPF1Q3BBV0 1214 aa17.98■□□□□ 0.47
LINC00343-203ENST00000454555 MRS2Q9HD23 443 aa17.98■□□□□ 0.47
LINC00343-203ENST00000454555 KIF7Q2M1P5 1343 aa17.98■□□□□ 0.47
LINC00343-203ENST00000454555 ROCK2O75116 1388 aaKnown RBP17.98■□□□□ 0.47
LINC00343-203ENST00000454555 GPRASP1Q5JY77 1395 aa17.98■□□□□ 0.47
LINC00343-203ENST00000454555 PIK3R4Q99570 1358 aa17.97■□□□□ 0.47
LINC00343-203ENST00000454555 ADGRB1O14514 1584 aa17.97■□□□□ 0.47
LINC00343-203ENST00000454555 SETD1AO15047 1707 aaKnown RBP17.97■□□□□ 0.47
LINC00343-203ENST00000454555 METP08581 1390 aa17.96■□□□□ 0.47
LINC00343-203ENST00000454555 TMEM132EQ6IEE7 984 aa17.95■□□□□ 0.46
LINC00343-203ENST00000454555 ASXL1Q8IXJ9 1541 aa17.94■□□□□ 0.46
LINC00343-203ENST00000454555 C11orf95C9JLR9 678 aaPredicted RBP17.94■□□□□ 0.46
LINC00343-203ENST00000454555 SMG6Q86US8 1419 aaKnown RBP17.93■□□□□ 0.46
LINC00343-203ENST00000454555 CARD11Q9BXL7 1154 aa17.93■□□□□ 0.46
LINC00343-203ENST00000454555 LRPPRCP42704 1394 aaKnown RBP17.92■□□□□ 0.46
LINC00343-203ENST00000454555 KTN1Q86UP2 1357 aaKnown RBP17.92■□□□□ 0.46
LINC00343-203ENST00000454555 YTHDC2Q9H6S0 1430 aaKnown RBP17.91■□□□□ 0.46
LINC00343-203ENST00000454555 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms