RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 TROQ12816 1431 aaPredicted RBP21.9■■□□□ 1.1
TCF3-204ENST00000453954 IQGAP2Q13576 1575 aa21.9■■□□□ 1.1
TCF3-204ENST00000453954 TSR2Q969E8 191 aaKnown RBP21.9■■□□□ 1.1
TCF3-204ENST00000453954 RWDD1Q9H446 243 aaPredicted RBP21.9■■□□□ 1.1
TCF3-204ENST00000453954 RLBP1P12271 317 aa21.9■■□□□ 1.1
TCF3-204ENST00000453954 SMC4Q9NTJ3 1288 aa21.89■■□□□ 1.09
TCF3-204ENST00000453954 TRAK1Q9UPV9 953 aa21.89■■□□□ 1.09
TCF3-204ENST00000453954 C22orf23Q9BZE7 217 aa21.89■■□□□ 1.09
TCF3-204ENST00000453954 SAMD9Q5K651 1589 aa21.88■■□□□ 1.09
TCF3-204ENST00000453954 KDM5CP41229 1560 aa21.88■■□□□ 1.09
TCF3-204ENST00000453954 MCM4P33991 863 aa21.88■■□□□ 1.09
TCF3-204ENST00000453954 ARHGEF11O15085 1522 aa21.87■■□□□ 1.09
TCF3-204ENST00000453954 NUP153P49790 1475 aaKnown RBP21.87■■□□□ 1.09
TCF3-204ENST00000453954 APBB1O00213 710 aa21.87■■□□□ 1.09
TCF3-204ENST00000453954 CFAP70Q5T0N1 1121 aa21.87■■□□□ 1.09
TCF3-204ENST00000453954 TCP11L2Q8N4U5 519 aa21.87■■□□□ 1.09
TCF3-204ENST00000453954 PMFBP1Q8TBY8 1022 aa21.87■■□□□ 1.09
TCF3-204ENST00000453954 GPATCH8Q9UKJ3 1502 aaKnown RBP21.87■■□□□ 1.09
TCF3-204ENST00000453954 LNPKQ9C0E8 428 aa21.86■■□□□ 1.09
TCF3-204ENST00000453954 TARBP1Q13395 1621 aaKnown RBP21.85■■□□□ 1.09
TCF3-204ENST00000453954 AMER1Q5JTC6 1135 aaPredicted RBP21.85■■□□□ 1.09
TCF3-204ENST00000453954 PKNOX2Q96KN3 472 aa21.85■■□□□ 1.09
TCF3-204ENST00000453954 WWC1Q8IX03 1113 aa21.84■■□□□ 1.09
TCF3-204ENST00000453954 ELL2O00472 640 aaPredicted RBP21.84■■□□□ 1.09
TCF3-204ENST00000453954 FOXD4L5Q5VV16 416 aaPredicted RBP21.84■■□□□ 1.09
TCF3-204ENST00000453954 FOXD4L4Q8WXT5 416 aaPredicted RBP21.84■■□□□ 1.09
TCF3-204ENST00000453954 ANP32BQ92688 251 aaKnown RBP21.83■■□□□ 1.09
TCF3-204ENST00000453954 MRC2Q9UBG0 1479 aa21.82■■□□□ 1.08
TCF3-204ENST00000453954 ERCC6Q03468 1493 aa21.81■■□□□ 1.08
TCF3-204ENST00000453954 USP19O94966 1318 aa21.81■■□□□ 1.08
TCF3-204ENST00000453954 SLC12A5Q9H2X9 1139 aa21.8■■□□□ 1.08
TCF3-204ENST00000453954 CHMP5Q9NZZ3 219 aa21.8■■□□□ 1.08
TCF3-204ENST00000453954 DNMT1P26358 1616 aaKnown RBP21.8■■□□□ 1.08
TCF3-204ENST00000453954 WDR62O43379 1518 aa21.79■■□□□ 1.08
TCF3-204ENST00000453954 RBM10P98175 930 aaKnown RBP21.78■■□□□ 1.08
TCF3-204ENST00000453954 KIF14Q15058 1648 aa21.78■■□□□ 1.08
TCF3-204ENST00000453954 PRAG1Q86YV5 1406 aa21.78■■□□□ 1.08
TCF3-204ENST00000453954 MTHFSP49914 203 aa21.77■■□□□ 1.08
TCF3-204ENST00000453954 C1orf115Q9H7X2 142 aa21.77■■□□□ 1.08
TCF3-204ENST00000453954 MBD5Q9P267 1494 aa21.77■■□□□ 1.08
TCF3-204ENST00000453954 PDE3AQ14432 1141 aa21.77■■□□□ 1.08
TCF3-204ENST00000453954 TMEM132EQ6IEE7 984 aa21.77■■□□□ 1.08
TCF3-204ENST00000453954 RARSP54136 660 aaKnown RBP21.77■■□□□ 1.07
TCF3-204ENST00000453954 CFAP53Q96M91 514 aa21.76■■□□□ 1.07
TCF3-204ENST00000453954 TBC1D32Q96NH3 1257 aa21.76■■□□□ 1.07
TCF3-204ENST00000453954 STK26Q9P289 416 aa21.75■■□□□ 1.07
TCF3-204ENST00000453954 GRPEL1Q9HAV7 217 aa21.75■■□□□ 1.07
TCF3-204ENST00000453954 NKTRP30414 1462 aaKnown RBP21.75■■□□□ 1.07
TCF3-204ENST00000453954 FOXD4L6Q3SYB3 417 aaPredicted RBP21.74■■□□□ 1.07
TCF3-204ENST00000453954 FOXD4L3Q6VB84 417 aaPredicted RBP21.74■■□□□ 1.07
TCF3-204ENST00000453954 ZMYND15Q9H091 742 aa21.74■■□□□ 1.07
TCF3-204ENST00000453954 DZIP1LQ8IYY4 767 aaKnown RBP21.74■■□□□ 1.07
TCF3-204ENST00000453954 ZKSCAN2Q63HK3 967 aa21.73■■□□□ 1.07
TCF3-204ENST00000453954 UHRF1BP1Q6BDS2 1440 aa21.73■■□□□ 1.07
TCF3-204ENST00000453954 BLMP54132 1417 aaPredicted RBP21.72■■□□□ 1.07
TCF3-204ENST00000453954 KIF3BO15066 747 aa21.72■■□□□ 1.07
TCF3-204ENST00000453954 ANKRD45Q5TZF3 282 aa21.72■■□□□ 1.07
TCF3-204ENST00000453954 MPNDQ8N594 471 aa21.72■■□□□ 1.07
TCF3-204ENST00000453954 EXOSC9Q06265 439 aaKnown RBP21.72■■□□□ 1.07
TCF3-204ENST00000453954 CARMIL2Q6F5E8 1435 aa21.72■■□□□ 1.07
TCF3-204ENST00000453954 ESPNB1AK53 854 aa21.72■■□□□ 1.07
TCF3-204ENST00000453954 PBRM1Q86U86 1689 aa21.72■■□□□ 1.07
TCF3-204ENST00000453954 AFAP1Q8N556 730 aa21.71■■□□□ 1.07
TCF3-204ENST00000453954 ZMYM4Q5VZL5 1548 aa21.7■■□□□ 1.06
TCF3-204ENST00000453954 MRE11P49959 708 aa21.7■■□□□ 1.06
TCF3-204ENST00000453954 DDX49Q9Y6V7 483 aaKnown RBP21.69■■□□□ 1.06
TCF3-204ENST00000453954 CARD14Q9BXL6 1004 aa21.69■■□□□ 1.06
TCF3-204ENST00000453954 ADAMTS12P58397 1594 aa21.69■■□□□ 1.06
TCF3-204ENST00000453954 RUNDC1Q96C34 613 aa21.69■■□□□ 1.06
TCF3-204ENST00000453954 NOL8Q76FK4 1167 aaKnown RBP21.68■■□□□ 1.06
TCF3-204ENST00000453954 FAM13BQ9NYF5 915 aa21.68■■□□□ 1.06
TCF3-204ENST00000453954 RBM42Q9BTD8 480 aaKnown RBP21.68■■□□□ 1.06
TCF3-204ENST00000453954 GBP4Q96PP9 640 aa21.67■■□□□ 1.06
TCF3-204ENST00000453954 EIF3AQ14152 1382 aaKnown RBP21.67■■□□□ 1.06
TCF3-204ENST00000453954 GOLGA6L22H0YM25 854 aa21.67■■□□□ 1.06
TCF3-204ENST00000453954 MSNP26038 577 aaKnown RBP21.67■■□□□ 1.06
TCF3-204ENST00000453954 MAGI2Q86UL8 1455 aa21.66■■□□□ 1.06
TCF3-204ENST00000453954 PLEKHH2Q8IVE3 1493 aa21.65■■□□□ 1.06
TCF3-204ENST00000453954 DDX11L8A8MPP1 907 aa21.65■■□□□ 1.06
TCF3-204ENST00000453954 ZNF521Q96K83 1311 aa21.64■■□□□ 1.06
TCF3-204ENST00000453954 ANTXR1Q9H6X2 564 aa21.64■■□□□ 1.06
TCF3-204ENST00000453954 COL17A1Q9UMD9 1497 aaPredicted RBP21.64■■□□□ 1.06
TCF3-204ENST00000453954 NOB1Q9ULX3 412 aaKnown RBP21.64■■□□□ 1.05
TCF3-204ENST00000453954 A2MP01023 1474 aa21.64■■□□□ 1.05
TCF3-204ENST00000453954 SLC24A1O60721 1099 aa21.64■■□□□ 1.05
TCF3-204ENST00000453954 MVPQ14764 893 aaKnown RBP21.64■■□□□ 1.05
TCF3-204ENST00000453954 TNPO1Q92973 898 aaKnown RBP21.64■■□□□ 1.05
TCF3-204ENST00000453954 IFT140Q96RY7 1462 aa21.64■■□□□ 1.05
TCF3-204ENST00000453954 GGNBP2Q9H3C7 697 aa21.63■■□□□ 1.05
TCF3-204ENST00000453954 SRPK2P78362 688 aaKnown RBP21.62■■□□□ 1.05
TCF3-204ENST00000453954 GGT6Q6P531 493 aa21.61■■□□□ 1.05
TCF3-204ENST00000453954 DISP1Q96F81 1524 aa21.61■■□□□ 1.05
TCF3-204ENST00000453954 MCTP1Q6DN14 999 aa21.61■■□□□ 1.05
TCF3-204ENST00000453954 TMEM57Q8N5G2 664 aa21.61■■□□□ 1.05
TCF3-204ENST00000453954 R3HCC1Q9Y3T6 440 aaKnown RBP21.6■■□□□ 1.05
TCF3-204ENST00000453954 PLCB2Q00722 1185 aa21.6■■□□□ 1.05
TCF3-204ENST00000453954 SSH1Q8WYL5 1049 aa21.6■■□□□ 1.05
TCF3-204ENST00000453954 KIAA1211Q6ZU35 1233 aa21.59■■□□□ 1.05
TCF3-204ENST00000453954 PTMAP06454 111 aaKnown RBP21.59■■□□□ 1.05
TCF3-204ENST00000453954 SSFA2P28290 1259 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms