RNA–Protein interactions for RNA: ENST00000452375.5

COPS7B-216, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-216ENST00000452375 FAM161AQ3B820 660 aa13.77□□□□□ -0.21
COPS7B-216ENST00000452375 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
COPS7B-216ENST00000452375 DCAF1Q9Y4B6 1507 aa13.77□□□□□ -0.21
COPS7B-216ENST00000452375 GFRA3O60609 400 aa13.76□□□□□ -0.21
COPS7B-216ENST00000452375 NECTIN2Q92692 538 aa13.75□□□□□ -0.21
COPS7B-216ENST00000452375 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.75□□□□□ -0.21
COPS7B-216ENST00000452375 SEMA3EO15041 775 aa13.71□□□□□ -0.21
COPS7B-216ENST00000452375 PCDHB3Q9Y5E6 796 aa13.71□□□□□ -0.21
COPS7B-216ENST00000452375 CUX2O14529 1486 aa13.71□□□□□ -0.21
COPS7B-216ENST00000452375 DNAJB2P25686 324 aa13.7□□□□□ -0.22
COPS7B-216ENST00000452375 RBM46Q8TBY0 533 aaKnown RBP13.7□□□□□ -0.22
COPS7B-216ENST00000452375 ADGRG1Q9Y653 693 aa13.7□□□□□ -0.22
COPS7B-216ENST00000452375 BLOC1S3Q6QNY0 202 aa13.68□□□□□ -0.22
COPS7B-216ENST00000452375 ZPR1O75312 459 aa13.67□□□□□ -0.22
COPS7B-216ENST00000452375 LAPTM4AQ15012 233 aa13.67□□□□□ -0.22
COPS7B-216ENST00000452375 P3H3Q8IVL6 736 aa13.67□□□□□ -0.22
COPS7B-216ENST00000452375 RCCD1A6NED2 376 aa13.66□□□□□ -0.22
COPS7B-216ENST00000452375 GGCXP38435 758 aa13.66□□□□□ -0.22
COPS7B-216ENST00000452375 PRR14Q9BWN1 585 aa13.65□□□□□ -0.22
COPS7B-216ENST00000452375 TMEM134Q9H6X4 195 aa13.65□□□□□ -0.22
COPS7B-216ENST00000452375 TLL1O43897 1013 aa13.64□□□□□ -0.23
COPS7B-216ENST00000452375 V9GY48 417 aaPredicted RBP13.64□□□□□ -0.23
COPS7B-216ENST00000452375 FCHSD2O94868 740 aa13.63□□□□□ -0.23
COPS7B-216ENST00000452375 LCE2BO14633 110 aa13.62□□□□□ -0.23
COPS7B-216ENST00000452375 CFHP08603 1231 aa13.61□□□□□ -0.23
COPS7B-216ENST00000452375 TRAF7Q6Q0C0 670 aa13.6□□□□□ -0.23
COPS7B-216ENST00000452375 NRG2O14511 850 aaPredicted RBP13.59□□□□□ -0.23
COPS7B-216ENST00000452375 KMT5BQ4FZB7 885 aa13.59□□□□□ -0.23
COPS7B-216ENST00000452375 PDZRN3Q9UPQ7 1066 aa13.58□□□□□ -0.24
COPS7B-216ENST00000452375 RBM26Q5T8P6 1007 aaKnown RBP13.57□□□□□ -0.24
COPS7B-216ENST00000452375 ERCC6Q03468 1493 aa13.56□□□□□ -0.24
COPS7B-216ENST00000452375 RNF223E7ERA6 249 aa13.56□□□□□ -0.24
COPS7B-216ENST00000452375 PPEF1O14829 653 aaPredicted RBP13.55□□□□□ -0.24
COPS7B-216ENST00000452375 ACTN4O43707 911 aaKnown RBP13.55□□□□□ -0.24
COPS7B-216ENST00000452375 SLC10A3P09131 477 aa13.55□□□□□ -0.24
COPS7B-216ENST00000452375 TMUB1Q9BVT8 246 aa13.55□□□□□ -0.24
COPS7B-216ENST00000452375 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.53□□□□□ -0.24
COPS7B-216ENST00000452375 S1PR4O95977 384 aa13.53□□□□□ -0.24
COPS7B-216ENST00000452375 PXYLP1Q8TE99 480 aa13.52□□□□□ -0.25
COPS7B-216ENST00000452375 FECHP22830 423 aa13.5□□□□□ -0.25
COPS7B-216ENST00000452375 SLC19A1P41440 591 aa13.5□□□□□ -0.25
COPS7B-216ENST00000452375 OATP04181 439 aa13.49□□□□□ -0.25
COPS7B-216ENST00000452375 PLCB2Q00722 1185 aa13.49□□□□□ -0.25
COPS7B-216ENST00000452375 HIC1Q14526 733 aa13.49□□□□□ -0.25
COPS7B-216ENST00000452375 PUS10Q3MIT2 529 aaKnown RBP13.49□□□□□ -0.25
COPS7B-216ENST00000452375 TESPA1A2RU30 521 aaPredicted RBP13.48□□□□□ -0.25
COPS7B-216ENST00000452375 METTL3Q86U44 580 aaKnown RBP13.48□□□□□ -0.25
COPS7B-216ENST00000452375 EMID1Q96A84 441 aaPredicted RBP13.48□□□□□ -0.25
COPS7B-216ENST00000452375 NLRP7Q8WX94 980 aa13.47□□□□□ -0.25
COPS7B-216ENST00000452375 NR1I2O75469 434 aa13.46□□□□□ -0.25
COPS7B-216ENST00000452375 ADH1BP00325 375 aa13.45□□□□□ -0.26
COPS7B-216ENST00000452375 SMYD5Q6GMV2 418 aa13.45□□□□□ -0.26
COPS7B-216ENST00000452375 RDH13Q8NBN7 331 aa13.44□□□□□ -0.26
COPS7B-216ENST00000452375 GNPATO15228 680 aa13.43□□□□□ -0.26
COPS7B-216ENST00000452375 ANKLE1Q8NAG6 615 aa13.43□□□□□ -0.26
COPS7B-216ENST00000452375 SPRYD7Q5W111 196 aa13.42□□□□□ -0.26
COPS7B-216ENST00000452375 TRIM67Q6ZTA4 783 aa13.42□□□□□ -0.26
COPS7B-216ENST00000452375 SCUBE3Q8IX30 993 aa13.42□□□□□ -0.26
COPS7B-216ENST00000452375 SLC6A16Q9GZN6 736 aa13.42□□□□□ -0.26
COPS7B-216ENST00000452375 HAP1P54257 671 aaPredicted RBP13.41□□□□□ -0.26
COPS7B-216ENST00000452375 RSPH4AQ5TD94 716 aa13.41□□□□□ -0.26
COPS7B-216ENST00000452375 LIAT1Q6ZQX7 453 aa13.41□□□□□ -0.26
COPS7B-216ENST00000452375 NCAPD3P42695 1498 aa13.41□□□□□ -0.26
COPS7B-216ENST00000452375 DDX11L8A8MPP1 907 aa13.4□□□□□ -0.26
COPS7B-216ENST00000452375 NESP48681 1621 aa13.39□□□□□ -0.27
COPS7B-216ENST00000452375 GPR37O15354 613 aa13.39□□□□□ -0.27
COPS7B-216ENST00000452375 ZNF697Q5TEC3 545 aa13.38□□□□□ -0.27
COPS7B-216ENST00000452375 TNFRSF10AO00220 468 aa13.37□□□□□ -0.27
COPS7B-216ENST00000452375 PLA2G2CQ5R387 149 aa13.37□□□□□ -0.27
COPS7B-216ENST00000452375 ZNF598Q86UK7 904 aaKnown RBP13.37□□□□□ -0.27
COPS7B-216ENST00000452375 SPSB2Q99619 263 aa13.37□□□□□ -0.27
COPS7B-216ENST00000452375 ZNF787Q6DD87 383 aa13.36□□□□□ -0.27
COPS7B-216ENST00000452375 DAXXQ9UER7 740 aaPredicted RBP13.35□□□□□ -0.27
COPS7B-216ENST00000452375 FUT2Q10981 343 aa13.34□□□□□ -0.27
COPS7B-216ENST00000452375 PKDCCQ504Y2 493 aa13.34□□□□□ -0.27
COPS7B-216ENST00000452375 GPIHBP1Q8IV16 184 aa13.33□□□□□ -0.28
COPS7B-216ENST00000452375 THOC2Q8NI27 1593 aaKnown RBP13.32□□□□□ -0.28
COPS7B-216ENST00000452375 PHOX2BQ99453 314 aa13.32□□□□□ -0.28
COPS7B-216ENST00000452375 ATAD2BQ9ULI0 1458 aa13.3□□□□□ -0.28
COPS7B-216ENST00000452375 FAM187AA6NFU0 413 aa13.3□□□□□ -0.28
COPS7B-216ENST00000452375 MORN1Q5T089 497 aa13.29□□□□□ -0.28
COPS7B-216ENST00000452375 FOXC1Q12948 553 aa13.28□□□□□ -0.28
COPS7B-216ENST00000452375 PRR20EP86478 221 aa13.27□□□□□ -0.29
COPS7B-216ENST00000452375 PRR20CP86479 221 aa13.27□□□□□ -0.29
COPS7B-216ENST00000452375 PRR20DP86480 221 aa13.27□□□□□ -0.29
COPS7B-216ENST00000452375 PRR20BP86481 221 aa13.27□□□□□ -0.29
COPS7B-216ENST00000452375 PRR20AP86496 221 aa13.27□□□□□ -0.29
COPS7B-216ENST00000452375 MYT1Q01538 1121 aa13.27□□□□□ -0.29
COPS7B-216ENST00000452375 GDF9O60383 454 aa13.26□□□□□ -0.29
COPS7B-216ENST00000452375 ATP6V1AP38606 617 aa13.26□□□□□ -0.29
COPS7B-216ENST00000452375 KDM2AQ9Y2K7 1162 aa13.26□□□□□ -0.29
COPS7B-216ENST00000452375 SLC27A5Q9Y2P5 690 aa13.26□□□□□ -0.29
COPS7B-216ENST00000452375 FCF1Q9Y324 198 aaKnown RBP13.26□□□□□ -0.29
COPS7B-216ENST00000452375 GCGRP47871 477 aa13.25□□□□□ -0.29
COPS7B-216ENST00000452375 SULF1Q8IWU6 871 aa13.25□□□□□ -0.29
COPS7B-216ENST00000452375 PRDM9Q9NQV7 894 aa13.25□□□□□ -0.29
COPS7B-216ENST00000452375 DGAT1O75907 488 aa13.24□□□□□ -0.29
COPS7B-216ENST00000452375 HMGXB3Q12766 1538 aa13.23□□□□□ -0.29
COPS7B-216ENST00000452375 FMNL1O95466 1100 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-216ENST00000452375 THAP11Q96EK4 314 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms