RNA–Protein interactions for RNA: ENST00000451538.1

CUL3-207, Transcript of cullin 3, humanhuman

TSL 5

Gene CUL3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-207ENST00000451538 ADAM33Q9BZ11 813 aa12.97□□□□□ -0.33
CUL3-207ENST00000451538 SKIV2LQ15477 1246 aaKnown RBP12.96□□□□□ -0.33
CUL3-207ENST00000451538 RBM46Q8TBY0 533 aaKnown RBP12.95□□□□□ -0.34
CUL3-207ENST00000451538 ARID3AQ99856 593 aa12.95□□□□□ -0.34
CUL3-207ENST00000451538 BHMG1C9JSJ3 638 aaPredicted RBP12.94□□□□□ -0.34
CUL3-207ENST00000451538 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
CUL3-207ENST00000451538 PTPREP23469 700 aa12.94□□□□□ -0.34
CUL3-207ENST00000451538 ONECUT3O60422 494 aaPredicted RBP12.93□□□□□ -0.34
CUL3-207ENST00000451538 PRSS12P56730 875 aa12.93□□□□□ -0.34
CUL3-207ENST00000451538 IFFO2Q5TF58 517 aa12.93□□□□□ -0.34
CUL3-207ENST00000451538 POLR3EQ9NVU0 708 aa12.93□□□□□ -0.34
CUL3-207ENST00000451538 CDCA7LQ96GN5 454 aa12.92□□□□□ -0.34
CUL3-207ENST00000451538 THSD4Q6ZMP0 1018 aa12.91□□□□□ -0.34
CUL3-207ENST00000451538 TTC13Q8NBP0 860 aa12.91□□□□□ -0.34
CUL3-207ENST00000451538 RGS20O76081 388 aa12.9□□□□□ -0.34
CUL3-207ENST00000451538 ZBED2Q9BTP6 218 aa12.9□□□□□ -0.34
CUL3-207ENST00000451538 ARID3CA6NKF2 412 aa12.89□□□□□ -0.35
CUL3-207ENST00000451538 GOLGA8CPA6NN73 597 aa12.89□□□□□ -0.35
CUL3-207ENST00000451538 MCM6Q14566 821 aa12.89□□□□□ -0.35
CUL3-207ENST00000451538 APBB1O00213 710 aa12.88□□□□□ -0.35
CUL3-207ENST00000451538 MYSM1Q5VVJ2 828 aa12.88□□□□□ -0.35
CUL3-207ENST00000451538 PROCA1Q8NCQ7 364 aaPredicted RBP12.88□□□□□ -0.35
CUL3-207ENST00000451538 CLUAP1Q96AJ1 413 aa12.88□□□□□ -0.35
CUL3-207ENST00000451538 CLK2P49760 499 aaKnown RBP12.87□□□□□ -0.35
CUL3-207ENST00000451538 MRPL50Q8N5N7 158 aaKnown RBP12.87□□□□□ -0.35
CUL3-207ENST00000451538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.86□□□□□ -0.35
CUL3-207ENST00000451538 DIXDC1Q155Q3 683 aa12.86□□□□□ -0.35
CUL3-207ENST00000451538 WNT2BQ93097 391 aa12.86□□□□□ -0.35
CUL3-207ENST00000451538 TBC1D2Q9BYX2 928 aa12.85□□□□□ -0.35
CUL3-207ENST00000451538 C1orf115Q9H7X2 142 aa12.85□□□□□ -0.35
CUL3-207ENST00000451538 A6NJR5 290 aa12.84□□□□□ -0.35
CUL3-207ENST00000451538 NBPF3Q9H094 633 aa12.83□□□□□ -0.36
CUL3-207ENST00000451538 RCCD1A6NED2 376 aa12.82□□□□□ -0.36
CUL3-207ENST00000451538 COL9A1P20849 921 aa12.82□□□□□ -0.36
CUL3-207ENST00000451538 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
CUL3-207ENST00000451538 PPP1R3GB7ZBB8 358 aa12.81□□□□□ -0.36
CUL3-207ENST00000451538 RAD21O60216 631 aa12.81□□□□□ -0.36
CUL3-207ENST00000451538 A0A0G2JS52 829 aa12.8□□□□□ -0.36
CUL3-207ENST00000451538 SULF1Q8IWU6 871 aa12.8□□□□□ -0.36
CUL3-207ENST00000451538 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.8□□□□□ -0.36
CUL3-207ENST00000451538 FAM198AQ9UFP1 575 aa12.8□□□□□ -0.36
CUL3-207ENST00000451538 TRAK2O60296 914 aa12.79□□□□□ -0.36
CUL3-207ENST00000451538 NUDT18Q6ZVK8 323 aa12.78□□□□□ -0.36
CUL3-207ENST00000451538 TSKSQ9UJT2 592 aa12.78□□□□□ -0.36
CUL3-207ENST00000451538 DDX11L8A8MPP1 907 aa12.77□□□□□ -0.37
CUL3-207ENST00000451538 DNAJB2P25686 324 aa12.77□□□□□ -0.37
CUL3-207ENST00000451538 PROSER2Q86WR7 435 aaPredicted RBP12.77□□□□□ -0.37
CUL3-207ENST00000451538 NUTM1Q86Y26 1132 aa12.77□□□□□ -0.37
CUL3-207ENST00000451538 EYA1Q99502 592 aa12.77□□□□□ -0.37
CUL3-207ENST00000451538 PNMA3Q9UL41 463 aa12.77□□□□□ -0.37
CUL3-207ENST00000451538 IRX2Q9BZI1 471 aaPredicted RBP12.76□□□□□ -0.37
CUL3-207ENST00000451538 SPDYE5A6NIY4 337 aa12.75□□□□□ -0.37
CUL3-207ENST00000451538 CD46P15529 392 aa12.75□□□□□ -0.37
CUL3-207ENST00000451538 RFC5P40937 340 aa12.75□□□□□ -0.37
CUL3-207ENST00000451538 RIC3Q7Z5B4 369 aa12.75□□□□□ -0.37
CUL3-207ENST00000451538 PACS2Q86VP3 889 aa12.75□□□□□ -0.37
CUL3-207ENST00000451538 SPIRE2Q8WWL2 714 aa12.75□□□□□ -0.37
CUL3-207ENST00000451538 LIMD1Q9UGP4 676 aa12.75□□□□□ -0.37
CUL3-207ENST00000451538 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
CUL3-207ENST00000451538 TATDN2Q93075 761 aa12.73□□□□□ -0.37
CUL3-207ENST00000451538 POM121Q96HA1 1249 aa12.73□□□□□ -0.37
CUL3-207ENST00000451538 RABGEF1Q9UJ41 708 aa12.73□□□□□ -0.37
CUL3-207ENST00000451538 CSPP1Q1MSJ5 1256 aa12.72□□□□□ -0.37
CUL3-207ENST00000451538 CCDC82Q8N4S0 544 aa12.72□□□□□ -0.37
CUL3-207ENST00000451538 RDH13Q8NBN7 331 aa12.71□□□□□ -0.37
CUL3-207ENST00000451538 BANK1Q8NDB2 785 aa12.71□□□□□ -0.37
CUL3-207ENST00000451538 TMEM259Q4ZIN3 620 aa12.7□□□□□ -0.38
CUL3-207ENST00000451538 ANKK1Q8NFD2 765 aa12.7□□□□□ -0.38
CUL3-207ENST00000451538 TMEM134Q9H6X4 195 aa12.7□□□□□ -0.38
CUL3-207ENST00000451538 C3orf80F5H4A9 247 aa12.68□□□□□ -0.38
CUL3-207ENST00000451538 SMAPO00193 183 aa12.68□□□□□ -0.38
CUL3-207ENST00000451538 PROX2Q3B8N5 592 aa12.68□□□□□ -0.38
CUL3-207ENST00000451538 RSBN1LQ6PCB5 846 aaPredicted RBP12.68□□□□□ -0.38
CUL3-207ENST00000451538 ZNF777Q9ULD5 760 aaPredicted RBP12.68□□□□□ -0.38
CUL3-207ENST00000451538 SPTLC1O15269 473 aa12.67□□□□□ -0.38
CUL3-207ENST00000451538 SNRKQ9NRH2 765 aa12.67□□□□□ -0.38
CUL3-207ENST00000451538 MOXD2PA6NHM9 499 aa12.66□□□□□ -0.38
CUL3-207ENST00000451538 ITGBL1O95965 494 aaPredicted RBP12.66□□□□□ -0.38
CUL3-207ENST00000451538 PPP2R2DQ66LE6 453 aa12.66□□□□□ -0.38
CUL3-207ENST00000451538 TUSC1Q2TAM9 212 aa12.65□□□□□ -0.38
CUL3-207ENST00000451538 LAPTM4BQ86VI4 370 aa12.65□□□□□ -0.38
CUL3-207ENST00000451538 COG6Q9Y2V7 657 aa12.65□□□□□ -0.38
CUL3-207ENST00000451538 CCDC97Q96F63 343 aaPredicted RBP12.64□□□□□ -0.39
CUL3-207ENST00000451538 NUTM2BA6NNL0 878 aaPredicted RBP12.63□□□□□ -0.39
CUL3-207ENST00000451538 NUTM2EB1AL46 878 aaPredicted RBP12.63□□□□□ -0.39
CUL3-207ENST00000451538 NDUFV2P19404 249 aa12.63□□□□□ -0.39
CUL3-207ENST00000451538 RSPH4AQ5TD94 716 aa12.63□□□□□ -0.39
CUL3-207ENST00000451538 NUTM2DQ5VT03 806 aaPredicted RBP12.63□□□□□ -0.39
CUL3-207ENST00000451538 FBXO31Q5XUX0 539 aaPredicted RBP12.63□□□□□ -0.39
CUL3-207ENST00000451538 NUTM2AQ8IVF1 878 aaPredicted RBP12.63□□□□□ -0.39
CUL3-207ENST00000451538 SOWAHBA6NEL2 793 aa12.62□□□□□ -0.39
CUL3-207ENST00000451538 FNBP4Q8N3X1 1017 aaPredicted RBP12.62□□□□□ -0.39
CUL3-207ENST00000451538 KDM4AO75164 1064 aa12.61□□□□□ -0.39
CUL3-207ENST00000451538 AP1G2O75843 785 aa12.61□□□□□ -0.39
CUL3-207ENST00000451538 BCAMP50895 628 aa12.61□□□□□ -0.39
CUL3-207ENST00000451538 NYAP1Q6ZVC0 841 aa12.61□□□□□ -0.39
CUL3-207ENST00000451538 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
CUL3-207ENST00000451538 QPCTQ16769 361 aa12.6□□□□□ -0.39
CUL3-207ENST00000451538 PRM3Q9NNZ6 103 aa12.6□□□□□ -0.39
CUL3-207ENST00000451538 KIAA1468Q9P260 1216 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms