RNA–Protein interactions for RNA: ENST00000451107.3

FGD6-202, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best)

Gene FGD6, Length 2,232 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-202ENST00000451107 KIF13AQ9H1H9 1805 aa29.42■■■□□ 2.3
FGD6-202ENST00000451107 KTN1Q86UP2 1357 aaKnown RBP29.42■■■□□ 2.3
FGD6-202ENST00000451107 DISP3Q9P2K9 1392 aa29.42■■■□□ 2.3
FGD6-202ENST00000451107 EIF3AQ14152 1382 aaKnown RBP29.41■■■□□ 2.3
FGD6-202ENST00000451107 CCDC184Q52MB2 194 aa29.4■■■□□ 2.3
FGD6-202ENST00000451107 PPLO60437 1756 aa29.4■■■□□ 2.3
FGD6-202ENST00000451107 SYNMO15061 1565 aa29.39■■■□□ 2.3
FGD6-202ENST00000451107 RPGRIP1LQ68CZ1 1315 aa29.39■■■□□ 2.3
FGD6-202ENST00000451107 AGLP35573 1532 aa29.39■■■□□ 2.3
FGD6-202ENST00000451107 ADGRF5Q8IZF2 1346 aa29.38■■■□□ 2.29
FGD6-202ENST00000451107 CHGAP10645 457 aaKnown RBP29.36■■■□□ 2.29
FGD6-202ENST00000451107 HNRNPUQ00839 825 aaKnown RBP eCLIP29.34■■■□□ 2.29
FGD6-202ENST00000451107 SETBP1Q9Y6X0 1596 aa29.34■■■□□ 2.29
FGD6-202ENST00000451107 RALBP1Q15311 655 aa29.32■■■□□ 2.28
FGD6-202ENST00000451107 CFAP70Q5T0N1 1121 aa29.32■■■□□ 2.28
FGD6-202ENST00000451107 CDCA8Q53HL2 280 aa29.32■■■□□ 2.28
FGD6-202ENST00000451107 PPP6R1Q9UPN7 881 aa29.31■■■□□ 2.28
FGD6-202ENST00000451107 PREX1Q8TCU6 1659 aa29.31■■■□□ 2.28
FGD6-202ENST00000451107 SLC24A1O60721 1099 aa29.3■■■□□ 2.28
FGD6-202ENST00000451107 PIK3C2GO75747 1445 aa29.3■■■□□ 2.28
FGD6-202ENST00000451107 SLC52A1Q9NWF4 448 aa29.29■■■□□ 2.28
FGD6-202ENST00000451107 ARHGEF40Q8TER5 1519 aa29.27■■■□□ 2.28
FGD6-202ENST00000451107 FAM9BQ8IZU0 186 aa29.27■■■□□ 2.28
FGD6-202ENST00000451107 MYO3AQ8NEV4 1616 aa29.26■■■□□ 2.27
FGD6-202ENST00000451107 PER1O15534 1290 aaPredicted RBP29.25■■■□□ 2.27
FGD6-202ENST00000451107 MYBBP1AQ9BQG0 1328 aaKnown RBP29.25■■■□□ 2.27
FGD6-202ENST00000451107 NEXMIFQ5QGS0 1516 aa29.24■■■□□ 2.27
FGD6-202ENST00000451107 CNGB1Q14028 1251 aaPredicted RBP29.23■■■□□ 2.27
FGD6-202ENST00000451107 PARD3Q8TEW0 1356 aa29.22■■■□□ 2.27
FGD6-202ENST00000451107 C14orf93Q9H972 538 aaKnown RBP29.22■■■□□ 2.27
FGD6-202ENST00000451107 BRD4O60885 1362 aaPredicted RBP29.21■■■□□ 2.27
FGD6-202ENST00000451107 IDI1Q13907 227 aa29.2■■■□□ 2.27
FGD6-202ENST00000451107 PANK3Q9H999 370 aa29.2■■■□□ 2.27
FGD6-202ENST00000451107 KDM5AP29375 1690 aaKnown RBP29.19■■■□□ 2.26
FGD6-202ENST00000451107 VGFO15240 615 aaPredicted RBP29.19■■■□□ 2.26
FGD6-202ENST00000451107 ERVK-7P63135 1459 aa29.19■■■□□ 2.26
FGD6-202ENST00000451107 SBNO2Q9Y2G9 1366 aa29.19■■■□□ 2.26
FGD6-202ENST00000451107 ADGRB1O14514 1584 aa29.18■■■□□ 2.26
FGD6-202ENST00000451107 ZFYVE9O95405 1425 aa29.18■■■□□ 2.26
FGD6-202ENST00000451107 TMC1Q8TDI8 760 aa29.17■■■□□ 2.26
FGD6-202ENST00000451107 TMEM131LA2VDJ0 1609 aa29.17■■■□□ 2.26
FGD6-202ENST00000451107 CLTCQ00610 1675 aaKnown RBP29.16■■■□□ 2.26
FGD6-202ENST00000451107 ZBED9Q6R2W3 1325 aa29.15■■■□□ 2.26
FGD6-202ENST00000451107 SUPT16HQ9Y5B9 1047 aaKnown RBP29.14■■■□□ 2.26
FGD6-202ENST00000451107 MYOM1P52179 1685 aa29.13■■■□□ 2.25
FGD6-202ENST00000451107 PNISRQ8TF01 805 aaKnown RBP29.12■■■□□ 2.25
FGD6-202ENST00000451107 NLRP13Q86W25 1043 aa29.12■■■□□ 2.25
FGD6-202ENST00000451107 MYO5BQ9ULV0 1848 aa29.11■■■□□ 2.25
FGD6-202ENST00000451107 CENPJQ9HC77 1338 aaPredicted RBP29.1■■■□□ 2.25
FGD6-202ENST00000451107 SPATA31D1Q6ZQQ2 1576 aa29.09■■■□□ 2.25
FGD6-202ENST00000451107 FBXO31Q5XUX0 539 aaPredicted RBP29.07■■■□□ 2.24
FGD6-202ENST00000451107 QRICH2Q9H0J4 1663 aa29.06■■■□□ 2.24
FGD6-202ENST00000451107 LRPPRCP42704 1394 aaKnown RBP29.06■■■□□ 2.24
FGD6-202ENST00000451107 KNSTRNQ9Y448 316 aa29.05■■■□□ 2.24
FGD6-202ENST00000451107 NEFLP07196 543 aa29.04■■■□□ 2.24
FGD6-202ENST00000451107 CC2D1BQ5T0F9 858 aaKnown RBP29.04■■■□□ 2.24
FGD6-202ENST00000451107 TRAK1Q9UPV9 953 aa29.04■■■□□ 2.24
FGD6-202ENST00000451107 ASXL1Q8IXJ9 1541 aa29.01■■■□□ 2.24
FGD6-202ENST00000451107 TMEM132EQ6IEE7 984 aa29.01■■■□□ 2.23
FGD6-202ENST00000451107 NPC1L1Q9UHC9 1359 aa29.01■■■□□ 2.23
FGD6-202ENST00000451107 NUTM2DQ5VT03 806 aaPredicted RBP29■■■□□ 2.23
FGD6-202ENST00000451107 ARHGEF28Q8N1W1 1705 aaKnown RBP29■■■□□ 2.23
FGD6-202ENST00000451107 MLECQ14165 292 aa29■■■□□ 2.23
FGD6-202ENST00000451107 AMER1Q5JTC6 1135 aaPredicted RBP28.97■■■□□ 2.23
FGD6-202ENST00000451107 ESF1Q9H501 851 aaKnown RBP28.96■■■□□ 2.23
FGD6-202ENST00000451107 STAG3Q9UJ98 1225 aa28.96■■■□□ 2.23
FGD6-202ENST00000451107 FKBP8Q14318 412 aa28.95■■■□□ 2.22
FGD6-202ENST00000451107 A2ML1A8K2U0 1454 aa28.93■■■□□ 2.22
FGD6-202ENST00000451107 INSRP06213 1382 aa28.93■■■□□ 2.22
FGD6-202ENST00000451107 PUS7Q96PZ0 661 aaKnown RBP28.92■■■□□ 2.22
FGD6-202ENST00000451107 ZMYM3Q14202 1370 aa28.91■■■□□ 2.22
FGD6-202ENST00000451107 ALKQ9UM73 1620 aa28.87■■■□□ 2.21
FGD6-202ENST00000451107 EVC2Q86UK5 1308 aa28.86■■■□□ 2.21
FGD6-202ENST00000451107 SMG6Q86US8 1419 aaKnown RBP28.86■■■□□ 2.21
FGD6-202ENST00000451107 RIMS2Q9UQ26 1411 aa28.85■■■□□ 2.21
FGD6-202ENST00000451107 PPP2R1AP30153 589 aa28.84■■■□□ 2.21
FGD6-202ENST00000451107 TULP4Q9NRJ4 1543 aa28.84■■■□□ 2.21
FGD6-202ENST00000451107 YTHDC2Q9H6S0 1430 aaKnown RBP28.84■■■□□ 2.21
FGD6-202ENST00000451107 PTPRMP28827 1452 aa28.82■■■□□ 2.2
FGD6-202ENST00000451107 CARD14Q9BXL6 1004 aa28.81■■■□□ 2.2
FGD6-202ENST00000451107 BLMP54132 1417 aaPredicted RBP28.8■■■□□ 2.2
FGD6-202ENST00000451107 PELP1Q8IZL8 1130 aaKnown RBP28.79■■■□□ 2.2
FGD6-202ENST00000451107 TNRQ92752 1358 aa28.79■■■□□ 2.2
FGD6-202ENST00000451107 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.78■■■□□ 2.2
FGD6-202ENST00000451107 NUDCQ9Y266 331 aa28.78■■■□□ 2.2
FGD6-202ENST00000451107 STK26Q9P289 416 aa28.77■■■□□ 2.2
FGD6-202ENST00000451107 USP32Q8NFA0 1604 aa28.77■■■□□ 2.2
FGD6-202ENST00000451107 SETD1AO15047 1707 aaKnown RBP28.75■■■□□ 2.19
FGD6-202ENST00000451107 NSD3Q9BZ95 1437 aa28.75■■■□□ 2.19
FGD6-202ENST00000451107 DLC1Q96QB1 1528 aa28.75■■■□□ 2.19
FGD6-202ENST00000451107 NINLQ9Y2I6 1382 aa28.74■■■□□ 2.19
FGD6-202ENST00000451107 SLC12A5Q9H2X9 1139 aa28.73■■■□□ 2.19
FGD6-202ENST00000451107 HDGFP51858 240 aaKnown RBP28.71■■■□□ 2.19
FGD6-202ENST00000451107 ERICH6BQ5W0A0 696 aa28.71■■■□□ 2.19
FGD6-202ENST00000451107 BCANQ96GW7 911 aa28.71■■■□□ 2.19
FGD6-202ENST00000451107 ANKRD36BQ8N2N9 1353 aa28.7■■■□□ 2.19
FGD6-202ENST00000451107 PRAM1Q96QH2 718 aa28.7■■■□□ 2.19
FGD6-202ENST00000451107 POGKQ9P215 609 aa28.7■■■□□ 2.19
FGD6-202ENST00000451107 SENP3Q9H4L4 574 aaPredicted RBP28.69■■■□□ 2.18
FGD6-202ENST00000451107 NRXN3Q9Y4C0 1643 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms