RNA–Protein interactions for RNA: ENST00000450894.7

ITGB4-203, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-203ENST00000450894 CEP89Q96ST8 783 aa17.14■□□□□ 0.33
ITGB4-203ENST00000450894 PATL2C9JE40 543 aaKnown RBP17.13■□□□□ 0.33
ITGB4-203ENST00000450894 LMOD2Q6P5Q4 547 aa17.13■□□□□ 0.33
ITGB4-203ENST00000450894 DZIP1LQ8IYY4 767 aaKnown RBP17.13■□□□□ 0.33
ITGB4-203ENST00000450894 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
ITGB4-203ENST00000450894 FAM184AQ8NB25 1140 aa17.12■□□□□ 0.33
ITGB4-203ENST00000450894 FOXD4L6Q3SYB3 417 aaPredicted RBP17.12■□□□□ 0.33
ITGB4-203ENST00000450894 FOXD4L3Q6VB84 417 aaPredicted RBP17.12■□□□□ 0.33
ITGB4-203ENST00000450894 TAF3Q5VWG9 929 aa17.11■□□□□ 0.33
ITGB4-203ENST00000450894 IFT57Q9NWB7 429 aa17.11■□□□□ 0.33
ITGB4-203ENST00000450894 MNS1Q8NEH6 495 aa17.11■□□□□ 0.33
ITGB4-203ENST00000450894 SOX12O15370 315 aa17.11■□□□□ 0.33
ITGB4-203ENST00000450894 PAK3O75914 559 aaPredicted RBP17.11■□□□□ 0.33
ITGB4-203ENST00000450894 WASHC2AQ641Q2 1341 aa17.1■□□□□ 0.33
ITGB4-203ENST00000450894 WASHC2CQ9Y4E1 1318 aa17.1■□□□□ 0.33
ITGB4-203ENST00000450894 AK7Q96M32 723 aa17.1■□□□□ 0.33
ITGB4-203ENST00000450894 STAC3Q96MF2 364 aa17.1■□□□□ 0.33
ITGB4-203ENST00000450894 FGD6Q6ZV73 1430 aa17.1■□□□□ 0.33
ITGB4-203ENST00000450894 RUFY2Q8WXA3 655 aa17.1■□□□□ 0.33
ITGB4-203ENST00000450894 PES1O00541 588 aaKnown RBP17.1■□□□□ 0.33
ITGB4-203ENST00000450894 GORABQ5T7V8 394 aa17.09■□□□□ 0.33
ITGB4-203ENST00000450894 API5Q9BZZ5 524 aaKnown RBP17.09■□□□□ 0.33
ITGB4-203ENST00000450894 PDE4CQ08493 712 aa17.09■□□□□ 0.33
ITGB4-203ENST00000450894 FRAT2O75474 233 aaPredicted RBP17.09■□□□□ 0.33
ITGB4-203ENST00000450894 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
ITGB4-203ENST00000450894 SLC4A10Q6U841 1118 aa17.09■□□□□ 0.33
ITGB4-203ENST00000450894 MCTP1Q6DN14 999 aa17.09■□□□□ 0.33
ITGB4-203ENST00000450894 DHX8Q14562 1220 aaKnown RBP17.08■□□□□ 0.33
ITGB4-203ENST00000450894 HSP90B2PQ58FF3 399 aa17.08■□□□□ 0.33
ITGB4-203ENST00000450894 RILPL2Q969X0 211 aa17.07■□□□□ 0.32
ITGB4-203ENST00000450894 CIZ1Q9ULV3 898 aaPredicted RBP17.07■□□□□ 0.32
ITGB4-203ENST00000450894 RUSC2Q8N2Y8 1516 aa17.07■□□□□ 0.32
ITGB4-203ENST00000450894 LRRC9Q6ZRR7 1453 aa17.06■□□□□ 0.32
ITGB4-203ENST00000450894 CDC45O75419 566 aa17.06■□□□□ 0.32
ITGB4-203ENST00000450894 IPO7O95373 1038 aaKnown RBP17.06■□□□□ 0.32
ITGB4-203ENST00000450894 RUFY1Q96T51 708 aa17.06■□□□□ 0.32
ITGB4-203ENST00000450894 MCM2P49736 904 aa17.06■□□□□ 0.32
ITGB4-203ENST00000450894 MYOM3Q5VTT5 1437 aa17.06■□□□□ 0.32
ITGB4-203ENST00000450894 CDR1P51861 262 aa17.06■□□□□ 0.32
ITGB4-203ENST00000450894 PDE3AQ14432 1141 aa17.05■□□□□ 0.32
ITGB4-203ENST00000450894 STK26Q9P289 416 aa17.05■□□□□ 0.32
ITGB4-203ENST00000450894 ERICH3Q5RHP9 1530 aa17.05■□□□□ 0.32
ITGB4-203ENST00000450894 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
ITGB4-203ENST00000450894 SASS6Q6UVJ0 657 aa17.05■□□□□ 0.32
ITGB4-203ENST00000450894 GRPEL1Q9HAV7 217 aa17.05■□□□□ 0.32
ITGB4-203ENST00000450894 APAF1O14727 1248 aa17.05■□□□□ 0.32
ITGB4-203ENST00000450894 SMARCA4P51532 1647 aa17.04■□□□□ 0.32
ITGB4-203ENST00000450894 CCP110O43303 1012 aa17.04■□□□□ 0.32
ITGB4-203ENST00000450894 RRP12Q5JTH9 1297 aaKnown RBP17.04■□□□□ 0.32
ITGB4-203ENST00000450894 EFCAB2Q5VUJ9 269 aa17.03■□□□□ 0.32
ITGB4-203ENST00000450894 TSPY26PQ9H489 355 aa17.03■□□□□ 0.32
ITGB4-203ENST00000450894 BICD2Q8TD16 824 aa17.03■□□□□ 0.32
ITGB4-203ENST00000450894 CWC22Q9HCG8 908 aaKnown RBP17.03■□□□□ 0.32
ITGB4-203ENST00000450894 ZKSCAN1P17029 563 aaPredicted RBP17.03■□□□□ 0.32
ITGB4-203ENST00000450894 RDXP35241 583 aaKnown RBP17.03■□□□□ 0.32
ITGB4-203ENST00000450894 RBM10P98175 930 aaKnown RBP17.02■□□□□ 0.32
ITGB4-203ENST00000450894 ANKRD20A12PQ8NF67 263 aa17.02■□□□□ 0.32
ITGB4-203ENST00000450894 UBE2Q2Q8WVN8 375 aa17.02■□□□□ 0.32
ITGB4-203ENST00000450894 ERCC6Q03468 1493 aa17.02■□□□□ 0.32
ITGB4-203ENST00000450894 RABEP1Q15276 862 aa17.02■□□□□ 0.31
ITGB4-203ENST00000450894 ESPNB1AK53 854 aa17.02■□□□□ 0.31
ITGB4-203ENST00000450894 HOOK1Q9UJC3 728 aaKnown RBP17.02■□□□□ 0.31
ITGB4-203ENST00000450894 ERCC4Q92889 916 aaPredicted RBP17.01■□□□□ 0.31
ITGB4-203ENST00000450894 CAVIN1Q6NZI2 390 aaKnown RBP17■□□□□ 0.31
ITGB4-203ENST00000450894 H0YHG0 523 aa17■□□□□ 0.31
ITGB4-203ENST00000450894 BCL2L13Q9BXK5 485 aa17■□□□□ 0.31
ITGB4-203ENST00000450894 CHMP3Q9Y3E7 222 aa17■□□□□ 0.31
ITGB4-203ENST00000450894 NAT10Q9H0A0 1025 aaKnown RBP17■□□□□ 0.31
ITGB4-203ENST00000450894 SMC3Q9UQE7 1217 aa16.99■□□□□ 0.31
ITGB4-203ENST00000450894 FYCO1Q9BQS8 1478 aa16.99■□□□□ 0.31
ITGB4-203ENST00000450894 MSH5O43196 834 aa16.99■□□□□ 0.31
ITGB4-203ENST00000450894 RNF20Q5VTR2 975 aa16.99■□□□□ 0.31
ITGB4-203ENST00000450894 RRP7AQ9Y3A4 280 aaKnown RBP16.98■□□□□ 0.31
ITGB4-203ENST00000450894 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.98■□□□□ 0.31
ITGB4-203ENST00000450894 TAF7LQ5H9L4 462 aa16.98■□□□□ 0.31
ITGB4-203ENST00000450894 LEKR1Q6ZMV7 388 aa16.98■□□□□ 0.31
ITGB4-203ENST00000450894 PDCL2Q8N4E4 241 aa16.98■□□□□ 0.31
ITGB4-203ENST00000450894 SCAPERQ9BY12 1400 aa16.97■□□□□ 0.31
ITGB4-203ENST00000450894 LRRFIP1Q32MZ4 808 aaKnown RBP16.97■□□□□ 0.31
ITGB4-203ENST00000450894 CCDC191Q8NCU4 936 aa16.97■□□□□ 0.31
ITGB4-203ENST00000450894 AKNAQ7Z591 1439 aa16.97■□□□□ 0.31
ITGB4-203ENST00000450894 ANO2Q9NQ90 1003 aa16.96■□□□□ 0.31
ITGB4-203ENST00000450894 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.31
ITGB4-203ENST00000450894 PCMTD1Q96MG8 357 aaPredicted RBP16.96■□□□□ 0.31
ITGB4-203ENST00000450894 DCTN1Q14203 1278 aa16.96■□□□□ 0.31
ITGB4-203ENST00000450894 EVC2Q86UK5 1308 aa16.96■□□□□ 0.31
ITGB4-203ENST00000450894 TOMM22Q9NS69 142 aa16.96■□□□□ 0.31
ITGB4-203ENST00000450894 MCM4P33991 863 aa16.95■□□□□ 0.3
ITGB4-203ENST00000450894 GGT6Q6P531 493 aa16.95■□□□□ 0.3
ITGB4-203ENST00000450894 ZSCAN30Q86W11 494 aa16.95■□□□□ 0.3
ITGB4-203ENST00000450894 CT47B1P0C2W7 299 aaPredicted RBP16.95■□□□□ 0.3
ITGB4-203ENST00000450894 PLEKHH2Q8IVE3 1493 aa16.95■□□□□ 0.3
ITGB4-203ENST00000450894 CASKIN1Q8WXD9 1431 aa16.94■□□□□ 0.3
ITGB4-203ENST00000450894 UQCRHLA0A096LP55 91 aa16.94■□□□□ 0.3
ITGB4-203ENST00000450894 UQCRHP07919 91 aa16.94■□□□□ 0.3
ITGB4-203ENST00000450894 CCDC73Q6ZRK6 1079 aa16.94■□□□□ 0.3
ITGB4-203ENST00000450894 CPLX2Q6PUV4 134 aaKnown RBP16.94■□□□□ 0.3
ITGB4-203ENST00000450894 MARCH6O60337 910 aa16.94■□□□□ 0.3
ITGB4-203ENST00000450894 GCC1Q96CN9 775 aa16.94■□□□□ 0.3
ITGB4-203ENST00000450894 VPS37CA5D8V6 355 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms