RNA–Protein interactions for RNA: ENST00000450179.1

TMEM254-206, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-206ENST00000450179 IRX5P78411 483 aaPredicted RBP9.6□□□□□ -0.87
TMEM254-206ENST00000450179 ZC3H15Q8WU90 426 aaKnown RBP9.6□□□□□ -0.87
TMEM254-206ENST00000450179 GPATCH8Q9UKJ3 1502 aaKnown RBP9.6□□□□□ -0.87
TMEM254-206ENST00000450179 ZNF518AQ6AHZ1 1483 aa9.59□□□□□ -0.87
TMEM254-206ENST00000450179 SAMD9LQ8IVG5 1584 aa9.59□□□□□ -0.87
TMEM254-206ENST00000450179 DCAF8Q5TAQ9 597 aa9.59□□□□□ -0.87
TMEM254-206ENST00000450179 HECW2Q9P2P5 1572 aa9.58□□□□□ -0.88
TMEM254-206ENST00000450179 EHBP1L1Q8N3D4 1523 aa9.58□□□□□ -0.88
TMEM254-206ENST00000450179 ZBTB7CA1YPR0 619 aa9.58□□□□□ -0.88
TMEM254-206ENST00000450179 PCDHB8Q9UN66 801 aa9.58□□□□□ -0.88
TMEM254-206ENST00000450179 PTPRMP28827 1452 aa9.58□□□□□ -0.88
TMEM254-206ENST00000450179 TIAM1Q13009 1591 aa9.58□□□□□ -0.88
TMEM254-206ENST00000450179 DIP2CQ9Y2E4 1556 aa9.58□□□□□ -0.88
TMEM254-206ENST00000450179 TRAPPC8Q9Y2L5 1435 aa9.57□□□□□ -0.88
TMEM254-206ENST00000450179 ABCA6Q8N139 1617 aa9.57□□□□□ -0.88
TMEM254-206ENST00000450179 AFAP1Q8N556 730 aa9.57□□□□□ -0.88
TMEM254-206ENST00000450179 KCNV2Q8TDN2 545 aa9.57□□□□□ -0.88
TMEM254-206ENST00000450179 ATP10AO60312 1499 aa9.57□□□□□ -0.88
TMEM254-206ENST00000450179 MLH3Q9UHC1 1453 aa9.57□□□□□ -0.88
TMEM254-206ENST00000450179 REREQ9P2R6 1566 aa9.57□□□□□ -0.88
TMEM254-206ENST00000450179 KIDINS220Q9ULH0 1771 aa9.57□□□□□ -0.88
TMEM254-206ENST00000450179 VPS8Q8N3P4 1428 aa9.56□□□□□ -0.88
TMEM254-206ENST00000450179 RIMS1Q86UR5 1692 aaKnown RBP9.56□□□□□ -0.88
TMEM254-206ENST00000450179 RIOK3O14730 519 aaKnown RBP9.56□□□□□ -0.88
TMEM254-206ENST00000450179 C9orf84Q5VXU9 1444 aa9.56□□□□□ -0.88
TMEM254-206ENST00000450179 MTUS2Q5JR59 1369 aa9.55□□□□□ -0.88
TMEM254-206ENST00000450179 SLC24A3Q9HC58 644 aa9.55□□□□□ -0.88
TMEM254-206ENST00000450179 SYCP2Q9BX26 1530 aa9.55□□□□□ -0.88
TMEM254-206ENST00000450179 FER1L4A9Z1Z3 1794 aa9.55□□□□□ -0.88
TMEM254-206ENST00000450179 GSE1Q14687 1217 aa9.54□□□□□ -0.88
TMEM254-206ENST00000450179 WDR70Q9NW82 654 aa9.54□□□□□ -0.88
TMEM254-206ENST00000450179 ARID4BQ4LE39 1312 aaPredicted RBP9.54□□□□□ -0.88
TMEM254-206ENST00000450179 SUPT6HQ7KZ85 1726 aaKnown RBP9.53□□□□□ -0.88
TMEM254-206ENST00000450179 OCEL1Q9H607 264 aa9.53□□□□□ -0.88
TMEM254-206ENST00000450179 KIAA1107Q9UPP5 1409 aa9.53□□□□□ -0.88
TMEM254-206ENST00000450179 INO80Q9ULG1 1556 aaPredicted RBP9.53□□□□□ -0.88
TMEM254-206ENST00000450179 NCOA2Q15596 1464 aa9.53□□□□□ -0.88
TMEM254-206ENST00000450179 CCNB3Q8WWL7 1395 aa9.52□□□□□ -0.88
TMEM254-206ENST00000450179 MAP3K1Q13233 1512 aa9.52□□□□□ -0.88
TMEM254-206ENST00000450179 PLEKHH2Q8IVE3 1493 aa9.52□□□□□ -0.89
TMEM254-206ENST00000450179 AGLP35573 1532 aa9.51□□□□□ -0.89
TMEM254-206ENST00000450179 STK25O00506 426 aa9.51□□□□□ -0.89
TMEM254-206ENST00000450179 LRRC9Q6ZRR7 1453 aa9.51□□□□□ -0.89
TMEM254-206ENST00000450179 MBD5Q9P267 1494 aa9.51□□□□□ -0.89
TMEM254-206ENST00000450179 PDIA4P13667 645 aaKnown RBP9.5□□□□□ -0.89
TMEM254-206ENST00000450179 CFDP1Q9UEE9 299 aaPredicted RBP9.5□□□□□ -0.89
TMEM254-206ENST00000450179 ZNF777Q9ULD5 760 aaPredicted RBP9.5□□□□□ -0.89
TMEM254-206ENST00000450179 ATP7AQ04656 1500 aa9.5□□□□□ -0.89
TMEM254-206ENST00000450179 PLXNC1O60486 1568 aa9.5□□□□□ -0.89
TMEM254-206ENST00000450179 LMTK3Q96Q04 1460 aa9.49□□□□□ -0.89
TMEM254-206ENST00000450179 VGFO15240 615 aaPredicted RBP9.49□□□□□ -0.89
TMEM254-206ENST00000450179 HNRNPMP52272 730 aaKnown RBP eCLIP9.49□□□□□ -0.89
TMEM254-206ENST00000450179 MARVELD3Q96A59 401 aa9.49□□□□□ -0.89
TMEM254-206ENST00000450179 ZNF644Q9H582 1327 aaPredicted RBP9.49□□□□□ -0.89
TMEM254-206ENST00000450179 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.48□□□□□ -0.89
TMEM254-206ENST00000450179 MLECQ14165 292 aa9.47□□□□□ -0.89
TMEM254-206ENST00000450179 KANK4Q5T7N3 995 aaPredicted RBP9.47□□□□□ -0.89
TMEM254-206ENST00000450179 ARID3AQ99856 593 aa9.47□□□□□ -0.89
TMEM254-206ENST00000450179 ADGBQ8N7X0 1667 aa9.47□□□□□ -0.89
TMEM254-206ENST00000450179 CAMSAP2Q08AD1 1489 aa9.47□□□□□ -0.89
TMEM254-206ENST00000450179 C3P01024 1663 aa9.46□□□□□ -0.89
TMEM254-206ENST00000450179 C1orf115Q9H7X2 142 aa9.46□□□□□ -0.9
TMEM254-206ENST00000450179 SPAG9O60271 1321 aaKnown RBP9.46□□□□□ -0.9
TMEM254-206ENST00000450179 ARHGEF5Q12774 1597 aa9.46□□□□□ -0.9
TMEM254-206ENST00000450179 ZMYND10O75800 440 aa9.45□□□□□ -0.9
TMEM254-206ENST00000450179 ARHGEF1Q92888 912 aaKnown RBP9.45□□□□□ -0.9
TMEM254-206ENST00000450179 RTEL1-TNFRSF6BF6WH68 1400 aa9.45□□□□□ -0.9
TMEM254-206ENST00000450179 PDCD7Q8N8D1 485 aaKnown RBP9.44□□□□□ -0.9
TMEM254-206ENST00000450179 MYT1LQ9UL68 1186 aa9.44□□□□□ -0.9
TMEM254-206ENST00000450179 A2MP01023 1474 aa9.44□□□□□ -0.9
TMEM254-206ENST00000450179 CCDC141Q6ZP82 1450 aa9.44□□□□□ -0.9
TMEM254-206ENST00000450179 MROH2AA6NES4 1674 aa9.44□□□□□ -0.9
TMEM254-206ENST00000450179 PREX1Q8TCU6 1659 aa9.44□□□□□ -0.9
TMEM254-206ENST00000450179 MYOM3Q5VTT5 1437 aa9.42□□□□□ -0.9
TMEM254-206ENST00000450179 TMEM121BQ9BXQ6 578 aaPredicted RBP9.42□□□□□ -0.9
TMEM254-206ENST00000450179 MAST1Q9Y2H9 1570 aa9.41□□□□□ -0.9
TMEM254-206ENST00000450179 MIA2Q96PC5 1412 aa9.41□□□□□ -0.9
TMEM254-206ENST00000450179 SETD1BQ9UPS6 1966 aaKnown RBP9.41□□□□□ -0.9
TMEM254-206ENST00000450179 TESPA1A2RU30 521 aaPredicted RBP9.41□□□□□ -0.9
TMEM254-206ENST00000450179 SNPHO15079 494 aa9.41□□□□□ -0.9
TMEM254-206ENST00000450179 CEBPAP49715 358 aaPredicted RBP9.41□□□□□ -0.9
TMEM254-206ENST00000450179 MMRN1Q13201 1228 aa9.41□□□□□ -0.9
TMEM254-206ENST00000450179 SPNS2Q8IVW8 549 aa9.41□□□□□ -0.9
TMEM254-206ENST00000450179 CLTCQ00610 1675 aaKnown RBP9.41□□□□□ -0.9
TMEM254-206ENST00000450179 CNTLNQ9NXG0 1405 aa9.4□□□□□ -0.9
TMEM254-206ENST00000450179 GOLGA2Q08379 1002 aa9.4□□□□□ -0.9
TMEM254-206ENST00000450179 C3orf67Q6ZVT6 689 aa9.4□□□□□ -0.9
TMEM254-206ENST00000450179 MKRN3Q13064 507 aaKnown RBP9.39□□□□□ -0.91
TMEM254-206ENST00000450179 RSPH4AQ5TD94 716 aa9.39□□□□□ -0.91
TMEM254-206ENST00000450179 ZNF467Q7Z7K2 595 aaPredicted RBP9.39□□□□□ -0.91
TMEM254-206ENST00000450179 CROCC2H7BZ55 1655 aa9.39□□□□□ -0.91
TMEM254-206ENST00000450179 DHX29Q7Z478 1369 aaKnown RBP9.38□□□□□ -0.91
TMEM254-206ENST00000450179 HSPA2P54652 639 aa9.38□□□□□ -0.91
TMEM254-206ENST00000450179 PTPN23Q9H3S7 1636 aa9.38□□□□□ -0.91
TMEM254-206ENST00000450179 STRCQ7RTU9 1775 aa9.37□□□□□ -0.91
TMEM254-206ENST00000450179 TCOF1Q13428 1488 aaKnown RBP9.37□□□□□ -0.91
TMEM254-206ENST00000450179 BARGINQ6ZT62 677 aa9.37□□□□□ -0.91
TMEM254-206ENST00000450179 NECTIN2Q92692 538 aa9.37□□□□□ -0.91
TMEM254-206ENST00000450179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.37□□□□□ -0.91
TMEM254-206ENST00000450179 ZMYM3Q14202 1370 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms