RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 OFD1O75665 1012 aa13.22□□□□□ -0.29
SCN5A-208ENST00000450102 EFCAB2Q5VUJ9 269 aa13.22□□□□□ -0.29
SCN5A-208ENST00000450102 CCAR1Q8IX12 1150 aaKnown RBP13.22□□□□□ -0.29
SCN5A-208ENST00000450102 FYB1O15117 783 aa13.22□□□□□ -0.29
SCN5A-208ENST00000450102 IPO9Q96P70 1041 aaKnown RBP13.22□□□□□ -0.29
SCN5A-208ENST00000450102 FHAD1B1AJZ9 1412 aa13.21□□□□□ -0.29
SCN5A-208ENST00000450102 RDXP35241 583 aaKnown RBP13.21□□□□□ -0.29
SCN5A-208ENST00000450102 CCDC173Q0VFZ6 552 aa13.21□□□□□ -0.29
SCN5A-208ENST00000450102 NUP155O75694 1391 aa13.21□□□□□ -0.29
SCN5A-208ENST00000450102 IKQ13123 557 aaPredicted RBP13.21□□□□□ -0.29
SCN5A-208ENST00000450102 COG3Q96JB2 828 aa13.21□□□□□ -0.29
SCN5A-208ENST00000450102 FOSBP53539 338 aa13.21□□□□□ -0.3
SCN5A-208ENST00000450102 SAFBQ15424 915 aaKnown RBP eCLIP13.21□□□□□ -0.3
SCN5A-208ENST00000450102 SKOR2Q2VWA4 1001 aaPredicted RBP13.21□□□□□ -0.3
SCN5A-208ENST00000450102 WRNQ14191 1432 aaPredicted RBP eCLIP13.2□□□□□ -0.3
SCN5A-208ENST00000450102 NECTIN2Q92692 538 aa13.2□□□□□ -0.3
SCN5A-208ENST00000450102 TRAK1Q9UPV9 953 aa13.2□□□□□ -0.3
SCN5A-208ENST00000450102 TIMELESSQ9UNS1 1208 aa13.19□□□□□ -0.3
SCN5A-208ENST00000450102 MTMR7Q9Y216 660 aa13.19□□□□□ -0.3
SCN5A-208ENST00000450102 CCDC27Q2M243 656 aa13.19□□□□□ -0.3
SCN5A-208ENST00000450102 CEP164Q9UPV0 1460 aa13.19□□□□□ -0.3
SCN5A-208ENST00000450102 RNF20Q5VTR2 975 aa13.19□□□□□ -0.3
SCN5A-208ENST00000450102 MAP7D2Q96T17 732 aa13.19□□□□□ -0.3
SCN5A-208ENST00000450102 DDX58O95786 925 aaKnown RBP13.18□□□□□ -0.3
SCN5A-208ENST00000450102 RB1CC1Q8TDY2 1594 aa13.18□□□□□ -0.3
SCN5A-208ENST00000450102 ACBD3Q9H3P7 528 aa13.18□□□□□ -0.3
SCN5A-208ENST00000450102 BCL2L13Q9BXK5 485 aa13.18□□□□□ -0.3
SCN5A-208ENST00000450102 G3BP1Q13283 466 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCN5A-208ENST00000450102 SASS6Q6UVJ0 657 aa13.17□□□□□ -0.3
SCN5A-208ENST00000450102 SLC4A3P48751 1232 aa13.17□□□□□ -0.3
SCN5A-208ENST00000450102 MNS1Q8NEH6 495 aa13.16□□□□□ -0.3
SCN5A-208ENST00000450102 BRMS1Q9HCU9 246 aa13.16□□□□□ -0.3
SCN5A-208ENST00000450102 CCDC191Q8NCU4 936 aa13.16□□□□□ -0.3
SCN5A-208ENST00000450102 VPS37CA5D8V6 355 aaPredicted RBP13.16□□□□□ -0.3
SCN5A-208ENST00000450102 DCTN1Q14203 1278 aa13.16□□□□□ -0.3
SCN5A-208ENST00000450102 REC8O95072 547 aa13.15□□□□□ -0.3
SCN5A-208ENST00000450102 CAGE1Q8TC20 777 aa13.15□□□□□ -0.3
SCN5A-208ENST00000450102 SKIDA1Q1XH10 827 aa13.15□□□□□ -0.3
SCN5A-208ENST00000450102 BAZ1BQ9UIG0 1483 aaKnown RBP13.15□□□□□ -0.3
SCN5A-208ENST00000450102 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
SCN5A-208ENST00000450102 SETD5Q9C0A6 1442 aa13.15□□□□□ -0.3
SCN5A-208ENST00000450102 HSP90B2PQ58FF3 399 aa13.14□□□□□ -0.31
SCN5A-208ENST00000450102 MYO6Q9UM54 1294 aa13.14□□□□□ -0.31
SCN5A-208ENST00000450102 CARMIL2Q6F5E8 1435 aa13.14□□□□□ -0.31
SCN5A-208ENST00000450102 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
SCN5A-208ENST00000450102 RALYLQ86SE5 291 aaKnown RBP13.14□□□□□ -0.31
SCN5A-208ENST00000450102 CCDC73Q6ZRK6 1079 aa13.14□□□□□ -0.31
SCN5A-208ENST00000450102 ARGLU1Q9NWB6 273 aaPredicted RBP13.14□□□□□ -0.31
SCN5A-208ENST00000450102 WASHC4Q2M389 1173 aa13.14□□□□□ -0.31
SCN5A-208ENST00000450102 PDILTQ8N807 584 aa13.14□□□□□ -0.31
SCN5A-208ENST00000450102 TNIKQ9UKE5 1360 aa13.13□□□□□ -0.31
SCN5A-208ENST00000450102 NOM1Q5C9Z4 860 aaKnown RBP13.13□□□□□ -0.31
SCN5A-208ENST00000450102 ARHGAP35Q9NRY4 1499 aa13.13□□□□□ -0.31
SCN5A-208ENST00000450102 ANKRD30AQ9BXX3 1397 aa13.13□□□□□ -0.31
SCN5A-208ENST00000450102 PSME1Q06323 249 aa13.13□□□□□ -0.31
SCN5A-208ENST00000450102 OLFM4Q6UX06 510 aa13.13□□□□□ -0.31
SCN5A-208ENST00000450102 PDE3BQ13370 1112 aa13.13□□□□□ -0.31
SCN5A-208ENST00000450102 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
SCN5A-208ENST00000450102 SMC3Q9UQE7 1217 aa13.13□□□□□ -0.31
SCN5A-208ENST00000450102 NEUROD6Q96NK8 337 aa13.13□□□□□ -0.31
SCN5A-208ENST00000450102 XBP1P17861 261 aa13.12□□□□□ -0.31
SCN5A-208ENST00000450102 CCDC180Q9P1Z9 1646 aa13.12□□□□□ -0.31
SCN5A-208ENST00000450102 KDM4AO75164 1064 aa13.12□□□□□ -0.31
SCN5A-208ENST00000450102 NEFHP12036 1026 aa13.12□□□□□ -0.31
SCN5A-208ENST00000450102 TTLL5Q6EMB2 1281 aa13.12□□□□□ -0.31
SCN5A-208ENST00000450102 SYCP1Q15431 976 aa13.12□□□□□ -0.31
SCN5A-208ENST00000450102 ZRSR2Q15696 482 aaKnown RBP13.12□□□□□ -0.31
SCN5A-208ENST00000450102 BCL11BQ9C0K0 894 aaPredicted RBP13.12□□□□□ -0.31
SCN5A-208ENST00000450102 PLIN1O60240 522 aa13.11□□□□□ -0.31
SCN5A-208ENST00000450102 VSIG10Q8N0Z9 540 aa13.11□□□□□ -0.31
SCN5A-208ENST00000450102 IFT57Q9NWB7 429 aa13.11□□□□□ -0.31
SCN5A-208ENST00000450102 PPP1R1BQ9UD71 204 aaPredicted RBP13.11□□□□□ -0.31
SCN5A-208ENST00000450102 CGNL1Q0VF96 1302 aa13.11□□□□□ -0.31
SCN5A-208ENST00000450102 CENPQQ7L2Z9 268 aaPredicted RBP13.1□□□□□ -0.31
SCN5A-208ENST00000450102 H0YHG0 523 aa13.1□□□□□ -0.31
SCN5A-208ENST00000450102 FKBP5Q13451 457 aaPredicted RBP13.1□□□□□ -0.31
SCN5A-208ENST00000450102 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
SCN5A-208ENST00000450102 HNRNPMP52272 730 aaKnown RBP eCLIP13.1□□□□□ -0.31
SCN5A-208ENST00000450102 WASHC2AQ641Q2 1341 aa13.1□□□□□ -0.31
SCN5A-208ENST00000450102 FAM161AQ3B820 660 aa13.1□□□□□ -0.31
SCN5A-208ENST00000450102 CDK5RAP3Q96JB5 506 aa13.1□□□□□ -0.31
SCN5A-208ENST00000450102 ANKRD62A6NC57 917 aa13.1□□□□□ -0.31
SCN5A-208ENST00000450102 CARMIL1Q5VZK9 1371 aa13.09□□□□□ -0.31
SCN5A-208ENST00000450102 PLCD4Q9BRC7 762 aa13.09□□□□□ -0.31
SCN5A-208ENST00000450102 RIC3Q7Z5B4 369 aa13.09□□□□□ -0.31
SCN5A-208ENST00000450102 FAM13BQ9NYF5 915 aa13.09□□□□□ -0.31
SCN5A-208ENST00000450102 PHLDB1Q86UU1 1377 aa13.09□□□□□ -0.31
SCN5A-208ENST00000450102 CCDC97Q96F63 343 aaPredicted RBP13.08□□□□□ -0.32
SCN5A-208ENST00000450102 ERC2O15083 957 aa13.08□□□□□ -0.32
SCN5A-208ENST00000450102 KRT18P05783 430 aaKnown RBP13.08□□□□□ -0.32
SCN5A-208ENST00000450102 AIMP1Q12904 312 aaKnown RBP13.07□□□□□ -0.32
SCN5A-208ENST00000450102 NAT10Q9H0A0 1025 aaKnown RBP13.07□□□□□ -0.32
SCN5A-208ENST00000450102 RAPGEF4Q8WZA2 1011 aa13.07□□□□□ -0.32
SCN5A-208ENST00000450102 ERCC4Q92889 916 aaPredicted RBP13.06□□□□□ -0.32
SCN5A-208ENST00000450102 PDCL3Q9H2J4 239 aa13.06□□□□□ -0.32
SCN5A-208ENST00000450102 COG6Q9Y2V7 657 aa13.06□□□□□ -0.32
SCN5A-208ENST00000450102 EVC2Q86UK5 1308 aa13.06□□□□□ -0.32
SCN5A-208ENST00000450102 HSP90AB4PQ58FF6 505 aa13.06□□□□□ -0.32
SCN5A-208ENST00000450102 MAGEC2Q9UBF1 373 aaPredicted RBP13.06□□□□□ -0.32
SCN5A-208ENST00000450102 E9PSI1 815 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms