RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 ATP10AO60312 1499 aa14.81□□□□□ -0.04
SYVN1-204ENST00000449943 KIF3BO15066 747 aa14.79□□□□□ -0.04
SYVN1-204ENST00000449943 INSRP06213 1382 aa14.79□□□□□ -0.04
SYVN1-204ENST00000449943 APAF1O14727 1248 aa14.78□□□□□ -0.04
SYVN1-204ENST00000449943 RGS3P49796 1198 aa14.78□□□□□ -0.04
SYVN1-204ENST00000449943 SCAF11Q99590 1463 aaKnown RBP14.78□□□□□ -0.04
SYVN1-204ENST00000449943 SLC4A3P48751 1232 aa14.78□□□□□ -0.04
SYVN1-204ENST00000449943 CFAP70Q5T0N1 1121 aa14.78□□□□□ -0.04
SYVN1-204ENST00000449943 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.78□□□□□ -0.04
SYVN1-204ENST00000449943 RNF17Q9BXT8 1623 aaKnown RBP14.77□□□□□ -0.05
SYVN1-204ENST00000449943 MADDQ8WXG6 1647 aa14.77□□□□□ -0.05
SYVN1-204ENST00000449943 ABCC1P33527 1531 aa14.76□□□□□ -0.05
SYVN1-204ENST00000449943 CENPQQ7L2Z9 268 aaPredicted RBP14.76□□□□□ -0.05
SYVN1-204ENST00000449943 EIF3AQ14152 1382 aaKnown RBP14.75□□□□□ -0.05
SYVN1-204ENST00000449943 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
SYVN1-204ENST00000449943 DAXXQ9UER7 740 aaPredicted RBP14.75□□□□□ -0.05
SYVN1-204ENST00000449943 ASXL1Q8IXJ9 1541 aa14.75□□□□□ -0.05
SYVN1-204ENST00000449943 SLFN5Q08AF3 891 aa14.75□□□□□ -0.05
SYVN1-204ENST00000449943 KANK1Q14678 1352 aa14.75□□□□□ -0.05
SYVN1-204ENST00000449943 TNNT2P45379 298 aaPredicted RBP14.74□□□□□ -0.05
SYVN1-204ENST00000449943 DDRGK1Q96HY6 314 aa14.74□□□□□ -0.05
SYVN1-204ENST00000449943 KDM2BQ8NHM5 1336 aa14.74□□□□□ -0.05
SYVN1-204ENST00000449943 BCAR3O75815 825 aa14.74□□□□□ -0.05
SYVN1-204ENST00000449943 ZCCHC11Q5TAX3 1644 aaKnown RBP14.73□□□□□ -0.05
SYVN1-204ENST00000449943 ZNF521Q96K83 1311 aa14.73□□□□□ -0.05
SYVN1-204ENST00000449943 SHROOM2Q13796 1616 aa14.73□□□□□ -0.05
SYVN1-204ENST00000449943 TRPM2O94759 1503 aa14.72□□□□□ -0.05
SYVN1-204ENST00000449943 ADGRF5Q8IZF2 1346 aa14.72□□□□□ -0.05
SYVN1-204ENST00000449943 NEUROD2Q15784 382 aa14.72□□□□□ -0.05
SYVN1-204ENST00000449943 CLTCL1P53675 1640 aa14.72□□□□□ -0.05
SYVN1-204ENST00000449943 CANXP27824 592 aaKnown RBP14.72□□□□□ -0.05
SYVN1-204ENST00000449943 IQGAP1P46940 1657 aa14.71□□□□□ -0.05
SYVN1-204ENST00000449943 SYNMO15061 1565 aa14.71□□□□□ -0.05
SYVN1-204ENST00000449943 PPM1GO15355 546 aaPredicted RBP14.71□□□□□ -0.05
SYVN1-204ENST00000449943 DMRT2Q9Y5R5 561 aa14.71□□□□□ -0.06
SYVN1-204ENST00000449943 PIK3C2GO75747 1445 aa14.7□□□□□ -0.06
SYVN1-204ENST00000449943 SCAPERQ9BY12 1400 aa14.7□□□□□ -0.06
SYVN1-204ENST00000449943 CARD14Q9BXL6 1004 aa14.7□□□□□ -0.06
SYVN1-204ENST00000449943 UGGT1Q9NYU2 1555 aa14.7□□□□□ -0.06
SYVN1-204ENST00000449943 FAM161AQ3B820 660 aa14.69□□□□□ -0.06
SYVN1-204ENST00000449943 ZFYVE16Q7Z3T8 1539 aa14.69□□□□□ -0.06
SYVN1-204ENST00000449943 PTPRTO14522 1441 aa14.69□□□□□ -0.06
SYVN1-204ENST00000449943 STAC3Q96MF2 364 aa14.68□□□□□ -0.06
SYVN1-204ENST00000449943 RRP7AQ9Y3A4 280 aaKnown RBP14.68□□□□□ -0.06
SYVN1-204ENST00000449943 SPHKAPQ2M3C7 1700 aa14.68□□□□□ -0.06
SYVN1-204ENST00000449943 E9PSI1 815 aa14.67□□□□□ -0.06
SYVN1-204ENST00000449943 TRAK1Q9UPV9 953 aa14.67□□□□□ -0.06
SYVN1-204ENST00000449943 RTEL1-TNFRSF6BF6WH68 1400 aa14.67□□□□□ -0.06
SYVN1-204ENST00000449943 C8orf34Q49A92 452 aa14.67□□□□□ -0.06
SYVN1-204ENST00000449943 FRAT1Q92837 279 aaPredicted RBP14.67□□□□□ -0.06
SYVN1-204ENST00000449943 NKTRP30414 1462 aaKnown RBP14.66□□□□□ -0.06
SYVN1-204ENST00000449943 SENP3Q9H4L4 574 aaPredicted RBP14.66□□□□□ -0.06
SYVN1-204ENST00000449943 CEP152O94986 1710 aa14.66□□□□□ -0.06
SYVN1-204ENST00000449943 USP35Q9P2H5 1018 aa14.65□□□□□ -0.06
SYVN1-204ENST00000449943 MORC1Q86VD1 984 aa14.65□□□□□ -0.06
SYVN1-204ENST00000449943 FANCAO15360 1455 aa14.65□□□□□ -0.06
SYVN1-204ENST00000449943 PANK1Q8TE04 598 aa14.65□□□□□ -0.06
SYVN1-204ENST00000449943 RTN4Q9NQC3 1192 aaKnown RBP14.65□□□□□ -0.06
SYVN1-204ENST00000449943 COG6Q9Y2V7 657 aa14.65□□□□□ -0.06
SYVN1-204ENST00000449943 ERVK-7P63135 1459 aa14.65□□□□□ -0.06
SYVN1-204ENST00000449943 TRMT2AQ8IZ69 625 aaKnown RBP14.64□□□□□ -0.07
SYVN1-204ENST00000449943 KDM5AP29375 1690 aaKnown RBP14.64□□□□□ -0.07
SYVN1-204ENST00000449943 MYOM1P52179 1685 aa14.64□□□□□ -0.07
SYVN1-204ENST00000449943 ATP7AQ04656 1500 aa14.64□□□□□ -0.07
SYVN1-204ENST00000449943 CENPJQ9HC77 1338 aaPredicted RBP14.64□□□□□ -0.07
SYVN1-204ENST00000449943 NPC1L1Q9UHC9 1359 aa14.64□□□□□ -0.07
SYVN1-204ENST00000449943 IL27Q8NEV9 243 aa14.63□□□□□ -0.07
SYVN1-204ENST00000449943 IGHDP01880 384 aa14.63□□□□□ -0.07
SYVN1-204ENST00000449943 SLC12A5Q9H2X9 1139 aa14.63□□□□□ -0.07
SYVN1-204ENST00000449943 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
SYVN1-204ENST00000449943 PLPPR3Q6T4P5 718 aa14.62□□□□□ -0.07
SYVN1-204ENST00000449943 TET3O43151 1660 aa14.62□□□□□ -0.07
SYVN1-204ENST00000449943 ADGRL1O94910 1474 aa14.62□□□□□ -0.07
SYVN1-204ENST00000449943 NFKBIBQ15653 356 aa14.62□□□□□ -0.07
SYVN1-204ENST00000449943 UHRF1BP1LA0JNW5 1464 aa14.62□□□□□ -0.07
SYVN1-204ENST00000449943 NUTM2DQ5VT03 806 aaPredicted RBP14.62□□□□□ -0.07
SYVN1-204ENST00000449943 WWC1Q8IX03 1113 aa14.62□□□□□ -0.07
SYVN1-204ENST00000449943 BCL2L13Q9BXK5 485 aa14.61□□□□□ -0.07
SYVN1-204ENST00000449943 GGT6Q6P531 493 aa14.61□□□□□ -0.07
SYVN1-204ENST00000449943 NSD3Q9BZ95 1437 aa14.61□□□□□ -0.07
SYVN1-204ENST00000449943 CLASP1Q7Z460 1538 aa14.6□□□□□ -0.07
SYVN1-204ENST00000449943 NOS1P29475 1434 aa14.6□□□□□ -0.07
SYVN1-204ENST00000449943 SLC24A1O60721 1099 aa14.6□□□□□ -0.07
SYVN1-204ENST00000449943 ABCA6Q8N139 1617 aa14.6□□□□□ -0.07
SYVN1-204ENST00000449943 CLUAP1Q96AJ1 413 aa14.58□□□□□ -0.08
SYVN1-204ENST00000449943 DEPDC5O75140 1603 aa14.58□□□□□ -0.08
SYVN1-204ENST00000449943 MAP3K4Q9Y6R4 1608 aa14.58□□□□□ -0.08
SYVN1-204ENST00000449943 CGNL1Q0VF96 1302 aa14.58□□□□□ -0.08
SYVN1-204ENST00000449943 TCP11L2Q8N4U5 519 aa14.57□□□□□ -0.08
SYVN1-204ENST00000449943 SAFB2Q14151 953 aaKnown RBP eCLIP14.57□□□□□ -0.08
SYVN1-204ENST00000449943 TNNQ9UQP3 1299 aa14.57□□□□□ -0.08
SYVN1-204ENST00000449943 MYOM2P54296 1465 aa14.56□□□□□ -0.08
SYVN1-204ENST00000449943 MTHFSP49914 203 aa14.56□□□□□ -0.08
SYVN1-204ENST00000449943 PDE3AQ14432 1141 aa14.56□□□□□ -0.08
SYVN1-204ENST00000449943 RUNDC1Q96C34 613 aa14.56□□□□□ -0.08
SYVN1-204ENST00000449943 INO80Q9ULG1 1556 aaPredicted RBP14.55□□□□□ -0.08
SYVN1-204ENST00000449943 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
SYVN1-204ENST00000449943 POLR3AO14802 1390 aaPredicted RBP14.55□□□□□ -0.08
SYVN1-204ENST00000449943 GSE1Q14687 1217 aa14.55□□□□□ -0.08
SYVN1-204ENST00000449943 VWDEQ8N2E2 1590 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms