RNA–Protein interactions for RNA: ENST00000449193.6

SKIDA1-202, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS P2 TSL 3 BASIC

Gene SKIDA1, Length 6,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-202ENST00000449193 TSR1Q2NL82 804 aaKnown RBP21.78■■□□□ 1.08
SKIDA1-202ENST00000449193 TPM2P07951 284 aa21.78■■□□□ 1.08
SKIDA1-202ENST00000449193 CENPQQ7L2Z9 268 aaPredicted RBP21.78■■□□□ 1.08
SKIDA1-202ENST00000449193 IFIT2P09913 472 aaKnown RBP21.77■■□□□ 1.08
SKIDA1-202ENST00000449193 API5Q9BZZ5 524 aaKnown RBP21.76■■□□□ 1.07
SKIDA1-202ENST00000449193 TRIM29Q14134 588 aa21.76■■□□□ 1.07
SKIDA1-202ENST00000449193 RAPGEF4Q8WZA2 1011 aa21.76■■□□□ 1.07
SKIDA1-202ENST00000449193 USP47Q96K76 1375 aa21.76■■□□□ 1.07
SKIDA1-202ENST00000449193 FOXD4L5Q5VV16 416 aaPredicted RBP21.75■■□□□ 1.07
SKIDA1-202ENST00000449193 FOXD4L4Q8WXT5 416 aaPredicted RBP21.75■■□□□ 1.07
SKIDA1-202ENST00000449193 ZKSCAN1P17029 563 aaPredicted RBP21.75■■□□□ 1.07
SKIDA1-202ENST00000449193 APPP05067 770 aa21.75■■□□□ 1.07
SKIDA1-202ENST00000449193 ROCK1Q13464 1354 aa21.74■■□□□ 1.07
SKIDA1-202ENST00000449193 FBXW7Q969H0 707 aa21.74■■□□□ 1.07
SKIDA1-202ENST00000449193 IPO9Q96P70 1041 aaKnown RBP21.74■■□□□ 1.07
SKIDA1-202ENST00000449193 G3BP1Q13283 466 aaKnown RBP eCLIP21.73■■□□□ 1.07
SKIDA1-202ENST00000449193 DDX11L8A8MPP1 907 aa21.72■■□□□ 1.07
SKIDA1-202ENST00000449193 DDX19BQ9UMR2 479 aa21.72■■□□□ 1.07
SKIDA1-202ENST00000449193 DHX57Q6P158 1386 aaKnown RBP21.72■■□□□ 1.07
SKIDA1-202ENST00000449193 RIPK4P57078 832 aa21.72■■□□□ 1.07
SKIDA1-202ENST00000449193 TPM1P09493 284 aa21.72■■□□□ 1.07
SKIDA1-202ENST00000449193 STAC3Q96MF2 364 aa21.72■■□□□ 1.07
SKIDA1-202ENST00000449193 DHX16O60231 1041 aaKnown RBP21.71■■□□□ 1.07
SKIDA1-202ENST00000449193 TRDNQ13061 729 aa21.71■■□□□ 1.07
SKIDA1-202ENST00000449193 CCDC47Q96A33 483 aaKnown RBP21.71■■□□□ 1.07
SKIDA1-202ENST00000449193 MCTP1Q6DN14 999 aa21.71■■□□□ 1.07
SKIDA1-202ENST00000449193 NECTIN2Q92692 538 aa21.71■■□□□ 1.07
SKIDA1-202ENST00000449193 REC8O95072 547 aa21.71■■□□□ 1.07
SKIDA1-202ENST00000449193 FKBP5Q13451 457 aaPredicted RBP21.71■■□□□ 1.07
SKIDA1-202ENST00000449193 GOLGA6L19H0YKK7 550 aa21.7■■□□□ 1.06
SKIDA1-202ENST00000449193 RBM33Q96EV2 1170 aaKnown RBP21.7■■□□□ 1.06
SKIDA1-202ENST00000449193 APAF1O14727 1248 aa21.7■■□□□ 1.06
SKIDA1-202ENST00000449193 CPLX1O14810 134 aa21.69■■□□□ 1.06
SKIDA1-202ENST00000449193 MYOM3Q5VTT5 1437 aa21.69■■□□□ 1.06
SKIDA1-202ENST00000449193 CWC22Q9HCG8 908 aaKnown RBP21.69■■□□□ 1.06
SKIDA1-202ENST00000449193 RNF20Q5VTR2 975 aa21.68■■□□□ 1.06
SKIDA1-202ENST00000449193 BECN2A8MW95 431 aa21.68■■□□□ 1.06
SKIDA1-202ENST00000449193 MIA2Q96PC5 1412 aa21.68■■□□□ 1.06
SKIDA1-202ENST00000449193 FAM161AQ3B820 660 aa21.67■■□□□ 1.06
SKIDA1-202ENST00000449193 HSP90AB4PQ58FF6 505 aa21.67■■□□□ 1.06
SKIDA1-202ENST00000449193 COG6Q9Y2V7 657 aa21.67■■□□□ 1.06
SKIDA1-202ENST00000449193 TSPYL4Q9UJ04 414 aa21.67■■□□□ 1.06
SKIDA1-202ENST00000449193 GAPVD1Q14C86 1478 aa21.67■■□□□ 1.06
SKIDA1-202ENST00000449193 ERICH2A1L162 156 aa21.67■■□□□ 1.06
SKIDA1-202ENST00000449193 ANO2Q9NQ90 1003 aa21.67■■□□□ 1.06
SKIDA1-202ENST00000449193 KLHL34Q8N239 644 aa21.66■■□□□ 1.06
SKIDA1-202ENST00000449193 NLRP2Q9NX02 1062 aa21.66■■□□□ 1.06
SKIDA1-202ENST00000449193 PRKRIP1Q9H875 184 aaPredicted RBP21.66■■□□□ 1.06
SKIDA1-202ENST00000449193 GNAI1P63096 354 aa21.65■■□□□ 1.06
SKIDA1-202ENST00000449193 DZIP1LQ8IYY4 767 aaKnown RBP21.64■■□□□ 1.05
SKIDA1-202ENST00000449193 RUNDC1Q96C34 613 aa21.64■■□□□ 1.05
SKIDA1-202ENST00000449193 WASHC2AQ641Q2 1341 aa21.64■■□□□ 1.05
SKIDA1-202ENST00000449193 RRP1P56182 461 aaKnown RBP21.64■■□□□ 1.05
SKIDA1-202ENST00000449193 NFXL1Q6ZNB6 911 aa21.63■■□□□ 1.05
SKIDA1-202ENST00000449193 PLIN1O60240 522 aa21.63■■□□□ 1.05
SKIDA1-202ENST00000449193 RIC3Q7Z5B4 369 aa21.63■■□□□ 1.05
SKIDA1-202ENST00000449193 ANKRD20A12PQ8NF67 263 aa21.62■■□□□ 1.05
SKIDA1-202ENST00000449193 PHF23Q9BUL5 403 aaPredicted RBP21.62■■□□□ 1.05
SKIDA1-202ENST00000449193 SKOR2Q2VWA4 1001 aaPredicted RBP21.62■■□□□ 1.05
SKIDA1-202ENST00000449193 CCDC43Q96MW1 224 aaKnown RBP21.62■■□□□ 1.05
SKIDA1-202ENST00000449193 DDX49Q9Y6V7 483 aaKnown RBP21.62■■□□□ 1.05
SKIDA1-202ENST00000449193 CRBNQ96SW2 442 aa21.61■■□□□ 1.05
SKIDA1-202ENST00000449193 HOOK1Q9UJC3 728 aaKnown RBP21.61■■□□□ 1.05
SKIDA1-202ENST00000449193 SMARCA4P51532 1647 aa21.61■■□□□ 1.05
SKIDA1-202ENST00000449193 ERC2O15083 957 aa21.61■■□□□ 1.05
SKIDA1-202ENST00000449193 DCAF8L1A6NGE4 600 aa21.6■■□□□ 1.05
SKIDA1-202ENST00000449193 WWC1Q8IX03 1113 aa21.59■■□□□ 1.05
SKIDA1-202ENST00000449193 PCMTD1Q96MG8 357 aaPredicted RBP21.59■■□□□ 1.05
SKIDA1-202ENST00000449193 GPRASP1Q5JY77 1395 aa21.59■■□□□ 1.05
SKIDA1-202ENST00000449193 ZBED9Q6R2W3 1325 aa21.59■■□□□ 1.05
SKIDA1-202ENST00000449193 FOXD4L6Q3SYB3 417 aaPredicted RBP21.58■■□□□ 1.05
SKIDA1-202ENST00000449193 CCDC70Q6NSX1 233 aa21.58■■□□□ 1.05
SKIDA1-202ENST00000449193 FOXD4L3Q6VB84 417 aaPredicted RBP21.58■■□□□ 1.05
SKIDA1-202ENST00000449193 IPO7O95373 1038 aaKnown RBP21.58■■□□□ 1.04
SKIDA1-202ENST00000449193 ARID3AQ99856 593 aa21.58■■□□□ 1.04
SKIDA1-202ENST00000449193 NLRP6P59044 892 aa21.57■■□□□ 1.04
SKIDA1-202ENST00000449193 EXOC6Q8TAG9 804 aa21.57■■□□□ 1.04
SKIDA1-202ENST00000449193 HMOX1P09601 288 aa21.56■■□□□ 1.04
SKIDA1-202ENST00000449193 ANO8Q9HCE9 1232 aaPredicted RBP21.56■■□□□ 1.04
SKIDA1-202ENST00000449193 CNKSR2Q8WXI2 1034 aa21.55■■□□□ 1.04
SKIDA1-202ENST00000449193 AIMP1Q12904 312 aaKnown RBP21.55■■□□□ 1.04
SKIDA1-202ENST00000449193 SAFBQ15424 915 aaKnown RBP eCLIP21.55■■□□□ 1.04
SKIDA1-202ENST00000449193 NEUROD6Q96NK8 337 aa21.55■■□□□ 1.04
SKIDA1-202ENST00000449193 FGD5Q6ZNL6 1462 aa21.55■■□□□ 1.04
SKIDA1-202ENST00000449193 PDE4AP27815 886 aa21.54■■□□□ 1.04
SKIDA1-202ENST00000449193 NUTM2GQ5VZR2 741 aa21.54■■□□□ 1.04
SKIDA1-202ENST00000449193 RALYLQ86SE5 291 aaKnown RBP21.54■■□□□ 1.04
SKIDA1-202ENST00000449193 CUX1P39880 1505 aa21.53■■□□□ 1.04
SKIDA1-202ENST00000449193 INTS3Q68E01 1043 aaKnown RBP21.53■■□□□ 1.04
SKIDA1-202ENST00000449193 KRI1Q8N9T8 703 aaKnown RBP21.53■■□□□ 1.04
SKIDA1-202ENST00000449193 GGNBP2Q9H3C7 697 aa21.53■■□□□ 1.04
SKIDA1-202ENST00000449193 CCDC27Q2M243 656 aa21.52■■□□□ 1.04
SKIDA1-202ENST00000449193 CABP2Q9NPB3 220 aa21.52■■□□□ 1.04
SKIDA1-202ENST00000449193 WASHC4Q2M389 1173 aa21.52■■□□□ 1.03
SKIDA1-202ENST00000449193 CCAR2Q8N163 923 aaKnown RBP21.52■■□□□ 1.03
SKIDA1-202ENST00000449193 BICD2Q8TD16 824 aa21.52■■□□□ 1.03
SKIDA1-202ENST00000449193 SAMD1Q6SPF0 538 aaPredicted RBP21.51■■□□□ 1.03
SKIDA1-202ENST00000449193 UBTFL1P0CB47 393 aaPredicted RBP21.51■■□□□ 1.03
SKIDA1-202ENST00000449193 TNNT3P45378 269 aaPredicted RBP21.5■■□□□ 1.03
SKIDA1-202ENST00000449193 PROSER2Q86WR7 435 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms