RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 NEURL4Q96JN8 1562 aa11.16□□□□□ -0.62
LINC00954-202ENST00000449086 SETD1BQ9UPS6 1966 aaKnown RBP11.16□□□□□ -0.62
LINC00954-202ENST00000449086 CCER2I3L3R5 266 aa11.16□□□□□ -0.62
LINC00954-202ENST00000449086 PKD2Q13563 968 aa11.16□□□□□ -0.62
LINC00954-202ENST00000449086 SLC52A1Q9NWF4 448 aa11.15□□□□□ -0.62
LINC00954-202ENST00000449086 A2ML1A8K2U0 1454 aa11.14□□□□□ -0.63
LINC00954-202ENST00000449086 PLA2R1Q13018 1463 aa11.13□□□□□ -0.63
LINC00954-202ENST00000449086 UHRF1BP1Q6BDS2 1440 aa11.13□□□□□ -0.63
LINC00954-202ENST00000449086 B4GALNT3Q6L9W6 998 aa11.13□□□□□ -0.63
LINC00954-202ENST00000449086 CEP170BQ9Y4F5 1589 aaPredicted RBP11.13□□□□□ -0.63
LINC00954-202ENST00000449086 CEBPAP49715 358 aaPredicted RBP11.12□□□□□ -0.63
LINC00954-202ENST00000449086 ANKRD30BQ9BXX2 1392 aa11.12□□□□□ -0.63
LINC00954-202ENST00000449086 ADGRB3O60242 1522 aa11.12□□□□□ -0.63
LINC00954-202ENST00000449086 FBXO31Q5XUX0 539 aaPredicted RBP11.11□□□□□ -0.63
LINC00954-202ENST00000449086 CLTCL1P53675 1640 aa11.11□□□□□ -0.63
LINC00954-202ENST00000449086 ANO8Q9HCE9 1232 aaPredicted RBP11.11□□□□□ -0.63
LINC00954-202ENST00000449086 CCDC144AA2RUR9 1427 aa11.1□□□□□ -0.63
LINC00954-202ENST00000449086 UBR1Q8IWV7 1749 aa11.1□□□□□ -0.63
LINC00954-202ENST00000449086 TMEM131LA2VDJ0 1609 aa11.09□□□□□ -0.63
LINC00954-202ENST00000449086 KIF1BO60333 1816 aa11.09□□□□□ -0.63
LINC00954-202ENST00000449086 UGGT1Q9NYU2 1555 aa11.09□□□□□ -0.63
LINC00954-202ENST00000449086 LMTK3Q96Q04 1460 aa11.08□□□□□ -0.64
LINC00954-202ENST00000449086 CFAP65Q6ZU64 1925 aaKnown RBP11.07□□□□□ -0.64
LINC00954-202ENST00000449086 SLIT1O75093 1534 aa11.07□□□□□ -0.64
LINC00954-202ENST00000449086 CNGB1Q14028 1251 aaPredicted RBP11.07□□□□□ -0.64
LINC00954-202ENST00000449086 PPP4R2Q9NY27 417 aa11.07□□□□□ -0.64
LINC00954-202ENST00000449086 NOP58Q9Y2X3 529 aaKnown RBP11.07□□□□□ -0.64
LINC00954-202ENST00000449086 IDI1Q13907 227 aa11.07□□□□□ -0.64
LINC00954-202ENST00000449086 FAM9BQ8IZU0 186 aa11.07□□□□□ -0.64
LINC00954-202ENST00000449086 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
LINC00954-202ENST00000449086 ARHGAP23Q9P227 1491 aa11.07□□□□□ -0.64
LINC00954-202ENST00000449086 RTL5Q5HYW3 569 aaPredicted RBP11.06□□□□□ -0.64
LINC00954-202ENST00000449086 PAK3O75914 559 aaPredicted RBP11.06□□□□□ -0.64
LINC00954-202ENST00000449086 TONSLQ96HA7 1378 aa11.06□□□□□ -0.64
LINC00954-202ENST00000449086 SPATA31E1Q6ZUB1 1445 aa11.06□□□□□ -0.64
LINC00954-202ENST00000449086 THEMISQ8N1K5 641 aaPredicted RBP11.05□□□□□ -0.64
LINC00954-202ENST00000449086 RPGRIP1LQ68CZ1 1315 aa11.04□□□□□ -0.64
LINC00954-202ENST00000449086 STAC3Q96MF2 364 aa11.03□□□□□ -0.64
LINC00954-202ENST00000449086 TMEM2Q9UHN6 1383 aa11.03□□□□□ -0.64
LINC00954-202ENST00000449086 CCDC136Q96JN2 1154 aa11.03□□□□□ -0.64
LINC00954-202ENST00000449086 ZFYVE9O95405 1425 aa11.02□□□□□ -0.64
LINC00954-202ENST00000449086 IFT172Q9UG01 1749 aa11.02□□□□□ -0.64
LINC00954-202ENST00000449086 HDGFP51858 240 aaKnown RBP11.02□□□□□ -0.64
LINC00954-202ENST00000449086 MYO5BQ9ULV0 1848 aa11.02□□□□□ -0.65
LINC00954-202ENST00000449086 POLR1AO95602 1720 aaPredicted RBP11.02□□□□□ -0.65
LINC00954-202ENST00000449086 NEXMIFQ5QGS0 1516 aa11.01□□□□□ -0.65
LINC00954-202ENST00000449086 SALL2Q9Y467 1007 aaPredicted RBP11.01□□□□□ -0.65
LINC00954-202ENST00000449086 SENP3-EIF4A1A0A087X0R7 540 aa11.01□□□□□ -0.65
LINC00954-202ENST00000449086 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINC00954-202ENST00000449086 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
LINC00954-202ENST00000449086 PPLO60437 1756 aa11.01□□□□□ -0.65
LINC00954-202ENST00000449086 MED14O60244 1454 aa11.01□□□□□ -0.65
LINC00954-202ENST00000449086 MYOM2P54296 1465 aa11□□□□□ -0.65
LINC00954-202ENST00000449086 RIMS2Q9UQ26 1411 aa11□□□□□ -0.65
LINC00954-202ENST00000449086 ANP32AP39687 249 aaKnown RBP10.99□□□□□ -0.65
LINC00954-202ENST00000449086 TIMELESSQ9UNS1 1208 aa10.99□□□□□ -0.65
LINC00954-202ENST00000449086 SCAF11Q99590 1463 aaKnown RBP10.99□□□□□ -0.65
LINC00954-202ENST00000449086 CCDC184Q52MB2 194 aa10.98□□□□□ -0.65
LINC00954-202ENST00000449086 NRXN1Q9ULB1 1477 aa10.98□□□□□ -0.65
LINC00954-202ENST00000449086 EID1Q9Y6B2 187 aa10.98□□□□□ -0.65
LINC00954-202ENST00000449086 DIP2AQ14689 1571 aa10.97□□□□□ -0.65
LINC00954-202ENST00000449086 NPM2Q86SE8 214 aaKnown RBP10.97□□□□□ -0.65
LINC00954-202ENST00000449086 ANKLE2Q86XL3 938 aa10.97□□□□□ -0.65
LINC00954-202ENST00000449086 IL27Q8NEV9 243 aa10.97□□□□□ -0.65
LINC00954-202ENST00000449086 ZBTB47Q9UFB7 747 aaPredicted RBP10.97□□□□□ -0.65
LINC00954-202ENST00000449086 SETBP1Q9Y6X0 1596 aa10.97□□□□□ -0.65
LINC00954-202ENST00000449086 PLEKHG1Q9ULL1 1385 aa10.97□□□□□ -0.65
LINC00954-202ENST00000449086 MRS2Q9HD23 443 aa10.97□□□□□ -0.65
LINC00954-202ENST00000449086 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.97□□□□□ -0.65
LINC00954-202ENST00000449086 STRCQ7RTU9 1775 aa10.97□□□□□ -0.65
LINC00954-202ENST00000449086 CHGAP10645 457 aaKnown RBP10.96□□□□□ -0.65
LINC00954-202ENST00000449086 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.66
LINC00954-202ENST00000449086 IQGAP1P46940 1657 aa10.95□□□□□ -0.66
LINC00954-202ENST00000449086 LAMC1P11047 1609 aa10.95□□□□□ -0.66
LINC00954-202ENST00000449086 ZNF326Q5BKZ1 582 aaKnown RBP10.95□□□□□ -0.66
LINC00954-202ENST00000449086 ERICH6BQ5W0A0 696 aa10.94□□□□□ -0.66
LINC00954-202ENST00000449086 DMRT2Q9Y5R5 561 aa10.94□□□□□ -0.66
LINC00954-202ENST00000449086 NPHP4O75161 1426 aaPredicted RBP10.94□□□□□ -0.66
LINC00954-202ENST00000449086 TXNDC2Q86VQ3 553 aa10.94□□□□□ -0.66
LINC00954-202ENST00000449086 KIAA1210Q9ULL0 1709 aa10.93□□□□□ -0.66
LINC00954-202ENST00000449086 PIK3C2GO75747 1445 aa10.93□□□□□ -0.66
LINC00954-202ENST00000449086 NRXN3Q9Y4C0 1643 aa10.93□□□□□ -0.66
LINC00954-202ENST00000449086 LTKP29376 864 aa10.92□□□□□ -0.66
LINC00954-202ENST00000449086 HSPA5P11021 654 aaKnown RBP10.92□□□□□ -0.66
LINC00954-202ENST00000449086 HSPA2P54652 639 aa10.92□□□□□ -0.66
LINC00954-202ENST00000449086 IPO9Q96P70 1041 aaKnown RBP10.92□□□□□ -0.66
LINC00954-202ENST00000449086 PIK3R4Q99570 1358 aa10.91□□□□□ -0.66
LINC00954-202ENST00000449086 WASHC2AQ641Q2 1341 aa10.91□□□□□ -0.66
LINC00954-202ENST00000449086 POLR3GLQ9BT43 218 aa10.91□□□□□ -0.66
LINC00954-202ENST00000449086 LAS1LQ9Y4W2 734 aaKnown RBP10.91□□□□□ -0.66
LINC00954-202ENST00000449086 RGL3Q3MIN7 710 aa10.91□□□□□ -0.66
LINC00954-202ENST00000449086 SETD1AO15047 1707 aaKnown RBP10.91□□□□□ -0.66
LINC00954-202ENST00000449086 PRAG1Q86YV5 1406 aa10.9□□□□□ -0.66
LINC00954-202ENST00000449086 C11orf95C9JLR9 678 aaPredicted RBP10.9□□□□□ -0.66
LINC00954-202ENST00000449086 L3MBTL2Q969R5 705 aa10.9□□□□□ -0.66
LINC00954-202ENST00000449086 ADAMTS13Q76LX8 1427 aa10.9□□□□□ -0.66
LINC00954-202ENST00000449086 NCKAP5LQ9HCH0 1330 aa10.9□□□□□ -0.67
LINC00954-202ENST00000449086 TBX22Q9Y458 520 aa10.89□□□□□ -0.67
LINC00954-202ENST00000449086 ALKQ9UM73 1620 aa10.89□□□□□ -0.67
LINC00954-202ENST00000449086 DCAF11Q8TEB1 546 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms