RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 ROCK1Q13464 1354 aa12.56□□□□□ -0.4
SCN10A-201ENST00000449082 NOC3LQ8WTT2 800 aaKnown RBP12.56□□□□□ -0.4
SCN10A-201ENST00000449082 FOXD4L1Q9NU39 408 aa12.56□□□□□ -0.4
SCN10A-201ENST00000449082 ZNF644Q9H582 1327 aaPredicted RBP12.56□□□□□ -0.4
SCN10A-201ENST00000449082 PHF14O94880 888 aa12.56□□□□□ -0.4
SCN10A-201ENST00000449082 FAM184AQ8NB25 1140 aa12.56□□□□□ -0.4
SCN10A-201ENST00000449082 DDX19BQ9UMR2 479 aa12.56□□□□□ -0.4
SCN10A-201ENST00000449082 ANKRD50Q9ULJ7 1429 aa12.55□□□□□ -0.4
SCN10A-201ENST00000449082 RUNDC1Q96C34 613 aa12.55□□□□□ -0.4
SCN10A-201ENST00000449082 VPS37DQ86XT2 251 aa12.55□□□□□ -0.4
SCN10A-201ENST00000449082 SYNJ2O15056 1496 aa12.54□□□□□ -0.4
SCN10A-201ENST00000449082 IFIT2P09913 472 aaKnown RBP12.54□□□□□ -0.4
SCN10A-201ENST00000449082 CREBRFQ8IUR6 639 aa12.54□□□□□ -0.4
SCN10A-201ENST00000449082 NECTIN2Q92692 538 aa12.54□□□□□ -0.4
SCN10A-201ENST00000449082 FYCO1Q9BQS8 1478 aa12.54□□□□□ -0.4
SCN10A-201ENST00000449082 CPLX2Q6PUV4 134 aaKnown RBP12.54□□□□□ -0.4
SCN10A-201ENST00000449082 RRP1P56182 461 aaKnown RBP12.53□□□□□ -0.4
SCN10A-201ENST00000449082 GNAI1P63096 354 aa12.53□□□□□ -0.4
SCN10A-201ENST00000449082 FKBP5Q13451 457 aaPredicted RBP12.53□□□□□ -0.4
SCN10A-201ENST00000449082 TSPYL4Q9UJ04 414 aa12.53□□□□□ -0.4
SCN10A-201ENST00000449082 IPO9Q96P70 1041 aaKnown RBP12.53□□□□□ -0.4
SCN10A-201ENST00000449082 CTDP1Q9Y5B0 961 aaPredicted RBP12.53□□□□□ -0.4
SCN10A-201ENST00000449082 ZBED9Q6R2W3 1325 aa12.53□□□□□ -0.4
SCN10A-201ENST00000449082 G3BP1Q13283 466 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCN10A-201ENST00000449082 COG6Q9Y2V7 657 aa12.53□□□□□ -0.4
SCN10A-201ENST00000449082 GOLGA6L3A6NEY3 463 aa12.53□□□□□ -0.4
SCN10A-201ENST00000449082 DEKP35659 375 aaKnown RBP12.53□□□□□ -0.4
SCN10A-201ENST00000449082 NLRP2Q9NX02 1062 aa12.52□□□□□ -0.4
SCN10A-201ENST00000449082 ATP6V1DQ9Y5K8 247 aa12.52□□□□□ -0.4
SCN10A-201ENST00000449082 CASKIN1Q8WXD9 1431 aa12.52□□□□□ -0.4
SCN10A-201ENST00000449082 PLIN1O60240 522 aa12.52□□□□□ -0.41
SCN10A-201ENST00000449082 GPRASP1Q5JY77 1395 aa12.52□□□□□ -0.41
SCN10A-201ENST00000449082 RRBP1Q9P2E9 1410 aaKnown RBP12.52□□□□□ -0.41
SCN10A-201ENST00000449082 DZIP1LQ8IYY4 767 aaKnown RBP12.51□□□□□ -0.41
SCN10A-201ENST00000449082 PRG4Q92954 1404 aaPredicted RBP12.51□□□□□ -0.41
SCN10A-201ENST00000449082 LRRC9Q6ZRR7 1453 aa12.51□□□□□ -0.41
SCN10A-201ENST00000449082 ZKSCAN1P17029 563 aaPredicted RBP12.51□□□□□ -0.41
SCN10A-201ENST00000449082 FAM161AQ3B820 660 aa12.51□□□□□ -0.41
SCN10A-201ENST00000449082 CRBNQ96SW2 442 aa12.51□□□□□ -0.41
SCN10A-201ENST00000449082 CEP89Q96ST8 783 aa12.51□□□□□ -0.41
SCN10A-201ENST00000449082 CABP2Q9NPB3 220 aa12.51□□□□□ -0.41
SCN10A-201ENST00000449082 APPP05067 770 aa12.5□□□□□ -0.41
SCN10A-201ENST00000449082 NLRP6P59044 892 aa12.5□□□□□ -0.41
SCN10A-201ENST00000449082 NCOA2Q15596 1464 aa12.5□□□□□ -0.41
SCN10A-201ENST00000449082 REC8O95072 547 aa12.5□□□□□ -0.41
SCN10A-201ENST00000449082 HSP90AB4PQ58FF6 505 aa12.5□□□□□ -0.41
SCN10A-201ENST00000449082 TPD52L1Q16890 204 aaPredicted RBP12.5□□□□□ -0.41
SCN10A-201ENST00000449082 FOXD4L5Q5VV16 416 aaPredicted RBP12.5□□□□□ -0.41
SCN10A-201ENST00000449082 AFAP1Q8N556 730 aa12.5□□□□□ -0.41
SCN10A-201ENST00000449082 FOXD4L4Q8WXT5 416 aaPredicted RBP12.5□□□□□ -0.41
SCN10A-201ENST00000449082 FBXW7Q969H0 707 aa12.5□□□□□ -0.41
SCN10A-201ENST00000449082 MRC2Q9UBG0 1479 aa12.5□□□□□ -0.41
SCN10A-201ENST00000449082 TXNDC2Q86VQ3 553 aa12.5□□□□□ -0.41
SCN10A-201ENST00000449082 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
SCN10A-201ENST00000449082 RAD21O60216 631 aa12.49□□□□□ -0.41
SCN10A-201ENST00000449082 HMOX1P09601 288 aa12.49□□□□□ -0.41
SCN10A-201ENST00000449082 TRIM29Q14134 588 aa12.49□□□□□ -0.41
SCN10A-201ENST00000449082 GGNBP2Q9H3C7 697 aa12.49□□□□□ -0.41
SCN10A-201ENST00000449082 TCEAL9Q9UHQ7 104 aa12.49□□□□□ -0.41
SCN10A-201ENST00000449082 TMEM132EQ6IEE7 984 aa12.49□□□□□ -0.41
SCN10A-201ENST00000449082 RIC3Q7Z5B4 369 aa12.49□□□□□ -0.41
SCN10A-201ENST00000449082 DDX11L8A8MPP1 907 aa12.49□□□□□ -0.41
SCN10A-201ENST00000449082 TPM3P06753 285 aa12.49□□□□□ -0.41
SCN10A-201ENST00000449082 NUTM2GQ5VZR2 741 aa12.49□□□□□ -0.41
SCN10A-201ENST00000449082 RBM33Q96EV2 1170 aaKnown RBP12.49□□□□□ -0.41
SCN10A-201ENST00000449082 TRDNQ13061 729 aa12.48□□□□□ -0.41
SCN10A-201ENST00000449082 EXOC6Q8TAG9 804 aa12.48□□□□□ -0.41
SCN10A-201ENST00000449082 RNF20Q5VTR2 975 aa12.48□□□□□ -0.41
SCN10A-201ENST00000449082 IFT140Q96RY7 1462 aa12.48□□□□□ -0.41
SCN10A-201ENST00000449082 PROSER2Q86WR7 435 aaPredicted RBP12.47□□□□□ -0.41
SCN10A-201ENST00000449082 KIF21BO75037 1637 aa12.47□□□□□ -0.41
SCN10A-201ENST00000449082 ANO2Q9NQ90 1003 aa12.47□□□□□ -0.41
SCN10A-201ENST00000449082 PES1O00541 588 aaKnown RBP12.47□□□□□ -0.41
SCN10A-201ENST00000449082 TPM2P07951 284 aa12.47□□□□□ -0.41
SCN10A-201ENST00000449082 ESCO1Q5FWF5 840 aa12.47□□□□□ -0.41
SCN10A-201ENST00000449082 MCTP1Q6DN14 999 aa12.47□□□□□ -0.41
SCN10A-201ENST00000449082 ABTB2Q8N961 1025 aa12.47□□□□□ -0.41
SCN10A-201ENST00000449082 PLEKHH2Q8IVE3 1493 aa12.46□□□□□ -0.41
SCN10A-201ENST00000449082 CPLX1O14810 134 aa12.46□□□□□ -0.41
SCN10A-201ENST00000449082 TSR1Q2NL82 804 aaKnown RBP12.46□□□□□ -0.41
SCN10A-201ENST00000449082 THEMISQ8N1K5 641 aaPredicted RBP12.46□□□□□ -0.41
SCN10A-201ENST00000449082 CCDC7Q96M83 1385 aa12.46□□□□□ -0.41
SCN10A-201ENST00000449082 ERC2O15083 957 aa12.46□□□□□ -0.42
SCN10A-201ENST00000449082 PRM3Q9NNZ6 103 aa12.46□□□□□ -0.42
SCN10A-201ENST00000449082 ERICH2A1L162 156 aa12.45□□□□□ -0.42
SCN10A-201ENST00000449082 DHX16O60231 1041 aaKnown RBP12.45□□□□□ -0.42
SCN10A-201ENST00000449082 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
SCN10A-201ENST00000449082 WASHC2AQ641Q2 1341 aa12.45□□□□□ -0.42
SCN10A-201ENST00000449082 KIF7Q2M1P5 1343 aa12.45□□□□□ -0.42
SCN10A-201ENST00000449082 AIMP1Q12904 312 aaKnown RBP12.45□□□□□ -0.42
SCN10A-201ENST00000449082 PDE4AP27815 886 aa12.44□□□□□ -0.42
SCN10A-201ENST00000449082 GAS2L2Q8NHY3 880 aa12.44□□□□□ -0.42
SCN10A-201ENST00000449082 KLHL34Q8N239 644 aa12.44□□□□□ -0.42
SCN10A-201ENST00000449082 CCDC47Q96A33 483 aaKnown RBP12.44□□□□□ -0.42
SCN10A-201ENST00000449082 GOLGA6L19H0YKK7 550 aa12.44□□□□□ -0.42
SCN10A-201ENST00000449082 PLEKHO1Q53GL0 409 aaPredicted RBP12.44□□□□□ -0.42
SCN10A-201ENST00000449082 A0A0U1RQG5 324 aaPredicted RBP12.43□□□□□ -0.42
SCN10A-201ENST00000449082 PDE4CQ08493 712 aa12.43□□□□□ -0.42
SCN10A-201ENST00000449082 NFXL1Q6ZNB6 911 aa12.43□□□□□ -0.42
SCN10A-201ENST00000449082 PHF23Q9BUL5 403 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms