RNA–Protein interactions for RNA: ENST00000448246.1

SP4-204, Transcript of Sp4 transcription factor, humanhuman

TSL 5

Gene SP4, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-204ENST00000448246 ERBINQ96RT1 1412 aa13.29□□□□□ -0.28
SP4-204ENST00000448246 CCDC7Q96M83 1385 aa13.29□□□□□ -0.28
SP4-204ENST00000448246 SMC4Q9NTJ3 1288 aa13.29□□□□□ -0.28
SP4-204ENST00000448246 PDE3BQ13370 1112 aa13.29□□□□□ -0.28
SP4-204ENST00000448246 IDI1Q13907 227 aa13.28□□□□□ -0.28
SP4-204ENST00000448246 GPRASP1Q5JY77 1395 aa13.28□□□□□ -0.28
SP4-204ENST00000448246 ABTB2Q8N961 1025 aa13.28□□□□□ -0.28
SP4-204ENST00000448246 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
SP4-204ENST00000448246 ADAMTS12P58397 1594 aa13.27□□□□□ -0.28
SP4-204ENST00000448246 GPATCH8Q9UKJ3 1502 aaKnown RBP13.27□□□□□ -0.29
SP4-204ENST00000448246 THOC2Q8NI27 1593 aaKnown RBP13.27□□□□□ -0.29
SP4-204ENST00000448246 ELL2O00472 640 aaPredicted RBP13.27□□□□□ -0.29
SP4-204ENST00000448246 APAF1O14727 1248 aa13.27□□□□□ -0.29
SP4-204ENST00000448246 SLC12A5Q9H2X9 1139 aa13.27□□□□□ -0.29
SP4-204ENST00000448246 NUP153P49790 1475 aaKnown RBP13.26□□□□□ -0.29
SP4-204ENST00000448246 PLCH2O75038 1416 aa13.26□□□□□ -0.29
SP4-204ENST00000448246 PPP6R1Q9UPN7 881 aa13.26□□□□□ -0.29
SP4-204ENST00000448246 DHX29Q7Z478 1369 aaKnown RBP13.26□□□□□ -0.29
SP4-204ENST00000448246 ITPRIPQ8IWB1 547 aa13.25□□□□□ -0.29
SP4-204ENST00000448246 CLUAP1Q96AJ1 413 aa13.25□□□□□ -0.29
SP4-204ENST00000448246 MEX3CQ5U5Q3 659 aaKnown RBP13.25□□□□□ -0.29
SP4-204ENST00000448246 PTPN23Q9H3S7 1636 aa13.25□□□□□ -0.29
SP4-204ENST00000448246 SLC4A10Q6U841 1118 aa13.25□□□□□ -0.29
SP4-204ENST00000448246 CDK19Q9BWU1 502 aa13.25□□□□□ -0.29
SP4-204ENST00000448246 NLRP2Q9NX02 1062 aa13.25□□□□□ -0.29
SP4-204ENST00000448246 NUP160Q12769 1436 aa13.25□□□□□ -0.29
SP4-204ENST00000448246 APBB1O00213 710 aa13.25□□□□□ -0.29
SP4-204ENST00000448246 RAPGEF4Q8WZA2 1011 aa13.25□□□□□ -0.29
SP4-204ENST00000448246 UGGT2Q9NYU1 1516 aa13.24□□□□□ -0.29
SP4-204ENST00000448246 TCERG1O14776 1098 aaKnown RBP13.24□□□□□ -0.29
SP4-204ENST00000448246 CABP1Q9NZU7 370 aa13.24□□□□□ -0.29
SP4-204ENST00000448246 CCDC184Q52MB2 194 aa13.23□□□□□ -0.29
SP4-204ENST00000448246 RAPGEF6Q8TEU7 1601 aa13.23□□□□□ -0.29
SP4-204ENST00000448246 CNTLNQ9NXG0 1405 aa13.23□□□□□ -0.29
SP4-204ENST00000448246 HDAC5Q9UQL6 1122 aa13.23□□□□□ -0.29
SP4-204ENST00000448246 MTHFSP49914 203 aa13.22□□□□□ -0.29
SP4-204ENST00000448246 WDR7Q9Y4E6 1490 aa13.22□□□□□ -0.29
SP4-204ENST00000448246 BECN1Q14457 450 aa13.22□□□□□ -0.29
SP4-204ENST00000448246 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
SP4-204ENST00000448246 GTF2E1P29083 439 aaPredicted RBP13.22□□□□□ -0.29
SP4-204ENST00000448246 KCNJ4P48050 445 aa13.22□□□□□ -0.29
SP4-204ENST00000448246 TEX14Q8IWB6 1497 aa13.22□□□□□ -0.29
SP4-204ENST00000448246 HMOX1P09601 288 aa13.21□□□□□ -0.29
SP4-204ENST00000448246 SYTL4Q96C24 671 aaPredicted RBP13.21□□□□□ -0.29
SP4-204ENST00000448246 TTC5Q8N0Z6 440 aa13.21□□□□□ -0.3
SP4-204ENST00000448246 RIPK4P57078 832 aa13.2□□□□□ -0.3
SP4-204ENST00000448246 RTEL1-TNFRSF6BF6WH68 1400 aa13.2□□□□□ -0.3
SP4-204ENST00000448246 USP35Q9P2H5 1018 aa13.2□□□□□ -0.3
SP4-204ENST00000448246 CHMP3Q9Y3E7 222 aa13.2□□□□□ -0.3
SP4-204ENST00000448246 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
SP4-204ENST00000448246 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.19□□□□□ -0.3
SP4-204ENST00000448246 E9PSI1 815 aa13.18□□□□□ -0.3
SP4-204ENST00000448246 NGEFQ8N5V2 710 aa13.18□□□□□ -0.3
SP4-204ENST00000448246 BCL2L13Q9BXK5 485 aa13.18□□□□□ -0.3
SP4-204ENST00000448246 RWDD1Q9H446 243 aaPredicted RBP13.18□□□□□ -0.3
SP4-204ENST00000448246 KIAA0556O60303 1618 aa13.18□□□□□ -0.3
SP4-204ENST00000448246 FGD1P98174 961 aa13.18□□□□□ -0.3
SP4-204ENST00000448246 TAF7LQ5H9L4 462 aa13.18□□□□□ -0.3
SP4-204ENST00000448246 WAPLQ7Z5K2 1190 aa13.18□□□□□ -0.3
SP4-204ENST00000448246 RUNDC1Q96C34 613 aa13.17□□□□□ -0.3
SP4-204ENST00000448246 ANO8Q9HCE9 1232 aaPredicted RBP13.17□□□□□ -0.3
SP4-204ENST00000448246 TMX4Q9H1E5 349 aaPredicted RBP13.16□□□□□ -0.3
SP4-204ENST00000448246 PDE4AP27815 886 aa13.16□□□□□ -0.3
SP4-204ENST00000448246 ANP32BQ92688 251 aaKnown RBP13.16□□□□□ -0.3
SP4-204ENST00000448246 ABCC2Q92887 1545 aa13.16□□□□□ -0.3
SP4-204ENST00000448246 HMMRO75330 724 aa13.16□□□□□ -0.3
SP4-204ENST00000448246 EIF2S2P20042 333 aaKnown RBP13.16□□□□□ -0.3
SP4-204ENST00000448246 PRKCSHP14314 528 aaPredicted RBP13.16□□□□□ -0.3
SP4-204ENST00000448246 AMOTL2Q9Y2J4 779 aa13.16□□□□□ -0.3
SP4-204ENST00000448246 ADGRF5Q8IZF2 1346 aa13.15□□□□□ -0.3
SP4-204ENST00000448246 NUDT16Q96DE0 195 aaKnown RBP13.15□□□□□ -0.3
SP4-204ENST00000448246 ATAD2Q6PL18 1390 aa13.14□□□□□ -0.31
SP4-204ENST00000448246 GORABQ5T7V8 394 aa13.14□□□□□ -0.31
SP4-204ENST00000448246 ZNF518AQ6AHZ1 1483 aa13.14□□□□□ -0.31
SP4-204ENST00000448246 PIP4K2BP78356 416 aa13.14□□□□□ -0.31
SP4-204ENST00000448246 STRN4Q9NRL3 753 aa13.13□□□□□ -0.31
SP4-204ENST00000448246 TRAPPC8Q9Y2L5 1435 aa13.13□□□□□ -0.31
SP4-204ENST00000448246 XPCQ01831 940 aaPredicted RBP13.13□□□□□ -0.31
SP4-204ENST00000448246 A2MP01023 1474 aa13.13□□□□□ -0.31
SP4-204ENST00000448246 EXOC6Q8TAG9 804 aa13.13□□□□□ -0.31
SP4-204ENST00000448246 RBM33Q96EV2 1170 aaKnown RBP13.13□□□□□ -0.31
SP4-204ENST00000448246 KDM5BQ9UGL1 1544 aa13.13□□□□□ -0.31
SP4-204ENST00000448246 DISP1Q96F81 1524 aa13.13□□□□□ -0.31
SP4-204ENST00000448246 PRDM11Q9NQV5 511 aa13.13□□□□□ -0.31
SP4-204ENST00000448246 IL27Q8NEV9 243 aa13.12□□□□□ -0.31
SP4-204ENST00000448246 NUTM2BA6NNL0 878 aaPredicted RBP13.12□□□□□ -0.31
SP4-204ENST00000448246 NUTM2EB1AL46 878 aaPredicted RBP13.12□□□□□ -0.31
SP4-204ENST00000448246 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
SP4-204ENST00000448246 NUTM2AQ8IVF1 878 aaPredicted RBP13.12□□□□□ -0.31
SP4-204ENST00000448246 ADAMTS8Q9UP79 889 aa13.12□□□□□ -0.31
SP4-204ENST00000448246 CTTNBP2Q8WZ74 1663 aa13.12□□□□□ -0.31
SP4-204ENST00000448246 RRP1P56182 461 aaKnown RBP13.11□□□□□ -0.31
SP4-204ENST00000448246 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
SP4-204ENST00000448246 TNRQ92752 1358 aa13.11□□□□□ -0.31
SP4-204ENST00000448246 NEXNQ0ZGT2 675 aa13.11□□□□□ -0.31
SP4-204ENST00000448246 TSPYL4Q9UJ04 414 aa13.11□□□□□ -0.31
SP4-204ENST00000448246 GNAI1P63096 354 aa13.1□□□□□ -0.31
SP4-204ENST00000448246 DMRT2Q9Y5R5 561 aa13.1□□□□□ -0.31
SP4-204ENST00000448246 ZKSCAN2Q63HK3 967 aa13.1□□□□□ -0.31
SP4-204ENST00000448246 SYCP2Q9BX26 1530 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms