RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 GOLGA2Q08379 1002 aa11.41□□□□□ -0.58
SMC6-207ENST00000448223 DHX29Q7Z478 1369 aaKnown RBP11.4□□□□□ -0.58
SMC6-207ENST00000448223 GCC2Q8IWJ2 1684 aa11.4□□□□□ -0.58
SMC6-207ENST00000448223 U2SURPO15042 1029 aaKnown RBP11.4□□□□□ -0.58
SMC6-207ENST00000448223 TEX14Q8IWB6 1497 aa11.4□□□□□ -0.59
SMC6-207ENST00000448223 GNL2Q13823 731 aaKnown RBP11.4□□□□□ -0.59
SMC6-207ENST00000448223 BRD4O60885 1362 aaPredicted RBP11.4□□□□□ -0.59
SMC6-207ENST00000448223 CCAR2Q8N163 923 aaKnown RBP11.39□□□□□ -0.59
SMC6-207ENST00000448223 ZNF592Q92610 1267 aa11.39□□□□□ -0.59
SMC6-207ENST00000448223 COG6Q9Y2V7 657 aa11.39□□□□□ -0.59
SMC6-207ENST00000448223 TULP1O00294 542 aaPredicted RBP11.39□□□□□ -0.59
SMC6-207ENST00000448223 PDE3BQ13370 1112 aa11.39□□□□□ -0.59
SMC6-207ENST00000448223 PLPPR3Q6T4P5 718 aa11.39□□□□□ -0.59
SMC6-207ENST00000448223 AEBP1Q8IUX7 1158 aa11.39□□□□□ -0.59
SMC6-207ENST00000448223 CCDC144AA2RUR9 1427 aa11.39□□□□□ -0.59
SMC6-207ENST00000448223 TAOK2Q9UL54 1235 aa11.39□□□□□ -0.59
SMC6-207ENST00000448223 DIAPH3Q9NSV4 1193 aa11.38□□□□□ -0.59
SMC6-207ENST00000448223 LRRIQ1Q96JM4 1722 aa11.38□□□□□ -0.59
SMC6-207ENST00000448223 CAMSAP2Q08AD1 1489 aa11.38□□□□□ -0.59
SMC6-207ENST00000448223 H0YHG0 523 aa11.37□□□□□ -0.59
SMC6-207ENST00000448223 TPM3P06753 285 aa11.37□□□□□ -0.59
SMC6-207ENST00000448223 RRP12Q5JTH9 1297 aaKnown RBP11.37□□□□□ -0.59
SMC6-207ENST00000448223 STK11IPQ8N1F8 1099 aa11.37□□□□□ -0.59
SMC6-207ENST00000448223 ARGLU1Q9NWB6 273 aaPredicted RBP11.37□□□□□ -0.59
SMC6-207ENST00000448223 NAP1L2Q9ULW6 460 aaPredicted RBP11.37□□□□□ -0.59
SMC6-207ENST00000448223 BBXQ8WY36 941 aaPredicted RBP11.37□□□□□ -0.59
SMC6-207ENST00000448223 MRE11P49959 708 aa11.37□□□□□ -0.59
SMC6-207ENST00000448223 HSP90AB3PQ58FF7 597 aa11.36□□□□□ -0.59
SMC6-207ENST00000448223 STK26Q9P289 416 aa11.36□□□□□ -0.59
SMC6-207ENST00000448223 SPATA31E1Q6ZUB1 1445 aa11.36□□□□□ -0.59
SMC6-207ENST00000448223 BCAR3O75815 825 aa11.36□□□□□ -0.59
SMC6-207ENST00000448223 MFAP1P55081 439 aaKnown RBP11.36□□□□□ -0.59
SMC6-207ENST00000448223 NFKBIBQ15653 356 aa11.36□□□□□ -0.59
SMC6-207ENST00000448223 GGT6Q6P531 493 aa11.36□□□□□ -0.59
SMC6-207ENST00000448223 BACH2Q9BYV9 841 aa11.36□□□□□ -0.59
SMC6-207ENST00000448223 KIF3BO15066 747 aa11.36□□□□□ -0.59
SMC6-207ENST00000448223 MORC1Q86VD1 984 aa11.36□□□□□ -0.59
SMC6-207ENST00000448223 TRAK1Q9UPV9 953 aa11.36□□□□□ -0.59
SMC6-207ENST00000448223 TROQ12816 1431 aaPredicted RBP11.36□□□□□ -0.59
SMC6-207ENST00000448223 PANK1Q8TE04 598 aa11.35□□□□□ -0.59
SMC6-207ENST00000448223 DEF6Q9H4E7 631 aa11.35□□□□□ -0.59
SMC6-207ENST00000448223 ABCA5Q8WWZ7 1642 aa11.35□□□□□ -0.59
SMC6-207ENST00000448223 CARMIL2Q6F5E8 1435 aa11.35□□□□□ -0.59
SMC6-207ENST00000448223 WDR62O43379 1518 aa11.35□□□□□ -0.59
SMC6-207ENST00000448223 CCDC191Q8NCU4 936 aa11.34□□□□□ -0.59
SMC6-207ENST00000448223 PDIA4P13667 645 aaKnown RBP11.34□□□□□ -0.59
SMC6-207ENST00000448223 HAP1P54257 671 aaPredicted RBP11.34□□□□□ -0.59
SMC6-207ENST00000448223 CDCA8Q53HL2 280 aa11.34□□□□□ -0.59
SMC6-207ENST00000448223 ARHGEF11O15085 1522 aa11.34□□□□□ -0.59
SMC6-207ENST00000448223 PZPP20742 1482 aa11.34□□□□□ -0.59
SMC6-207ENST00000448223 CFAP53Q96M91 514 aa11.33□□□□□ -0.59
SMC6-207ENST00000448223 HMGN5P82970 282 aaKnown RBP11.33□□□□□ -0.6
SMC6-207ENST00000448223 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
SMC6-207ENST00000448223 PLB1Q6P1J6 1458 aa11.33□□□□□ -0.6
SMC6-207ENST00000448223 U2AF1L5P0DN76 240 aaPredicted RBP11.33□□□□□ -0.6
SMC6-207ENST00000448223 U2AF1Q01081 240 aaKnown RBP eCLIP11.33□□□□□ -0.6
SMC6-207ENST00000448223 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
SMC6-207ENST00000448223 HSP90B2PQ58FF3 399 aa11.32□□□□□ -0.6
SMC6-207ENST00000448223 TSPYL1Q9H0U9 437 aa11.32□□□□□ -0.6
SMC6-207ENST00000448223 C9orf84Q5VXU9 1444 aa11.32□□□□□ -0.6
SMC6-207ENST00000448223 FRAT2O75474 233 aaPredicted RBP11.32□□□□□ -0.6
SMC6-207ENST00000448223 PLEKHG5O94827 1062 aa11.32□□□□□ -0.6
SMC6-207ENST00000448223 ACBD3Q9H3P7 528 aa11.32□□□□□ -0.6
SMC6-207ENST00000448223 RWDD1Q9H446 243 aaPredicted RBP11.32□□□□□ -0.6
SMC6-207ENST00000448223 NUP153P49790 1475 aaKnown RBP11.32□□□□□ -0.6
SMC6-207ENST00000448223 CCDC70Q6NSX1 233 aa11.31□□□□□ -0.6
SMC6-207ENST00000448223 AFAP1Q8N556 730 aa11.31□□□□□ -0.6
SMC6-207ENST00000448223 RNF123Q5XPI4 1314 aa11.31□□□□□ -0.6
SMC6-207ENST00000448223 FAM161AQ3B820 660 aa11.31□□□□□ -0.6
SMC6-207ENST00000448223 DNMT1P26358 1616 aaKnown RBP11.31□□□□□ -0.6
SMC6-207ENST00000448223 KIF16BQ96L93 1317 aa11.3□□□□□ -0.6
SMC6-207ENST00000448223 PPP2R1AP30153 589 aa11.3□□□□□ -0.6
SMC6-207ENST00000448223 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
SMC6-207ENST00000448223 LEKR1Q6ZMV7 388 aa11.3□□□□□ -0.6
SMC6-207ENST00000448223 USP8P40818 1118 aa11.3□□□□□ -0.6
SMC6-207ENST00000448223 KIAA0586Q9BVV6 1533 aa11.29□□□□□ -0.6
SMC6-207ENST00000448223 CENPQQ7L2Z9 268 aaPredicted RBP11.29□□□□□ -0.6
SMC6-207ENST00000448223 CCDC39Q9UFE4 941 aa11.29□□□□□ -0.6
SMC6-207ENST00000448223 CFAP70Q5T0N1 1121 aa11.29□□□□□ -0.6
SMC6-207ENST00000448223 GOLGA6L19H0YKK7 550 aa11.29□□□□□ -0.6
SMC6-207ENST00000448223 GPATCH8Q9UKJ3 1502 aaKnown RBP11.29□□□□□ -0.6
SMC6-207ENST00000448223 KIF21AQ7Z4S6 1674 aa11.29□□□□□ -0.6
SMC6-207ENST00000448223 CENPJQ9HC77 1338 aaPredicted RBP11.29□□□□□ -0.6
SMC6-207ENST00000448223 KIAA1211Q6ZU35 1233 aa11.28□□□□□ -0.6
SMC6-207ENST00000448223 TMEM132EQ6IEE7 984 aa11.28□□□□□ -0.6
SMC6-207ENST00000448223 PDCL3Q9H2J4 239 aa11.28□□□□□ -0.6
SMC6-207ENST00000448223 APBB1O00213 710 aa11.28□□□□□ -0.6
SMC6-207ENST00000448223 HMMRO75330 724 aa11.28□□□□□ -0.6
SMC6-207ENST00000448223 PLCD4Q9BRC7 762 aa11.28□□□□□ -0.6
SMC6-207ENST00000448223 MNS1Q8NEH6 495 aa11.28□□□□□ -0.6
SMC6-207ENST00000448223 PTPRGP23470 1445 aa11.27□□□□□ -0.6
SMC6-207ENST00000448223 ELL2O00472 640 aaPredicted RBP11.27□□□□□ -0.6
SMC6-207ENST00000448223 SOX12O15370 315 aa11.27□□□□□ -0.6
SMC6-207ENST00000448223 NEFHP12036 1026 aa11.27□□□□□ -0.6
SMC6-207ENST00000448223 NASPP49321 788 aaPredicted RBP11.27□□□□□ -0.6
SMC6-207ENST00000448223 HOMER1Q86YM7 354 aa11.27□□□□□ -0.6
SMC6-207ENST00000448223 CHMP5Q9NZZ3 219 aa11.27□□□□□ -0.6
SMC6-207ENST00000448223 SRPK2P78362 688 aaKnown RBP11.27□□□□□ -0.61
SMC6-207ENST00000448223 EFCAB2Q5VUJ9 269 aa11.27□□□□□ -0.61
SMC6-207ENST00000448223 RALGAPBQ86X10 1494 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms