RNA–Protein interactions for RNA: ENST00000447632.6

TTC39A-212, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-212ENST00000447632 ANKLE2Q86XL3 938 aa12.19□□□□□ -0.46
TTC39A-212ENST00000447632 TRPM2O94759 1503 aa12.19□□□□□ -0.46
TTC39A-212ENST00000447632 CLTCL1P53675 1640 aa12.19□□□□□ -0.46
TTC39A-212ENST00000447632 MROH2AA6NES4 1674 aa12.18□□□□□ -0.46
TTC39A-212ENST00000447632 A2ML1A8K2U0 1454 aa12.18□□□□□ -0.46
TTC39A-212ENST00000447632 NLRP1Q9C000 1473 aa12.17□□□□□ -0.46
TTC39A-212ENST00000447632 SPATA31E1Q6ZUB1 1445 aa12.17□□□□□ -0.46
TTC39A-212ENST00000447632 SPHKAPQ2M3C7 1700 aa12.17□□□□□ -0.46
TTC39A-212ENST00000447632 VGFO15240 615 aaPredicted RBP12.17□□□□□ -0.46
TTC39A-212ENST00000447632 NBPF8Q3BBV2 869 aa12.17□□□□□ -0.46
TTC39A-212ENST00000447632 TMEM2Q9UHN6 1383 aa12.17□□□□□ -0.46
TTC39A-212ENST00000447632 SETD1BQ9UPS6 1966 aaKnown RBP12.17□□□□□ -0.46
TTC39A-212ENST00000447632 HDGFP51858 240 aaKnown RBP12.17□□□□□ -0.46
TTC39A-212ENST00000447632 CFAP70Q5T0N1 1121 aa12.16□□□□□ -0.46
TTC39A-212ENST00000447632 TMEM132EQ6IEE7 984 aa12.16□□□□□ -0.46
TTC39A-212ENST00000447632 PIK3C2BO00750 1634 aa12.15□□□□□ -0.46
TTC39A-212ENST00000447632 RIMS2Q9UQ26 1411 aa12.15□□□□□ -0.46
TTC39A-212ENST00000447632 NBPF1Q3BBV0 1214 aa12.14□□□□□ -0.47
TTC39A-212ENST00000447632 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.14□□□□□ -0.47
TTC39A-212ENST00000447632 RPGRIP1LQ68CZ1 1315 aa12.14□□□□□ -0.47
TTC39A-212ENST00000447632 STK26Q9P289 416 aa12.13□□□□□ -0.47
TTC39A-212ENST00000447632 LMTK3Q96Q04 1460 aa12.13□□□□□ -0.47
TTC39A-212ENST00000447632 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
TTC39A-212ENST00000447632 TMEM131LA2VDJ0 1609 aa12.11□□□□□ -0.47
TTC39A-212ENST00000447632 MYO3AQ8NEV4 1616 aa12.11□□□□□ -0.47
TTC39A-212ENST00000447632 RBM33Q96EV2 1170 aaKnown RBP12.11□□□□□ -0.47
TTC39A-212ENST00000447632 HIRIP3Q9BW71 556 aaPredicted RBP12.11□□□□□ -0.47
TTC39A-212ENST00000447632 SUPT16HQ9Y5B9 1047 aaKnown RBP12.1□□□□□ -0.47
TTC39A-212ENST00000447632 ADGRB3O60242 1522 aa12.1□□□□□ -0.47
TTC39A-212ENST00000447632 TIMELESSQ9UNS1 1208 aa12.09□□□□□ -0.47
TTC39A-212ENST00000447632 ZFYVE9O95405 1425 aa12.09□□□□□ -0.47
TTC39A-212ENST00000447632 SAFB2Q14151 953 aaKnown RBP eCLIP12.08□□□□□ -0.48
TTC39A-212ENST00000447632 C14orf93Q9H972 538 aaKnown RBP12.08□□□□□ -0.48
TTC39A-212ENST00000447632 TRAK1Q9UPV9 953 aa12.08□□□□□ -0.48
TTC39A-212ENST00000447632 MYO5BQ9ULV0 1848 aa12.08□□□□□ -0.48
TTC39A-212ENST00000447632 UBR1Q8IWV7 1749 aa12.07□□□□□ -0.48
TTC39A-212ENST00000447632 KIF1BO60333 1816 aa12.07□□□□□ -0.48
TTC39A-212ENST00000447632 SCAF11Q99590 1463 aaKnown RBP12.07□□□□□ -0.48
TTC39A-212ENST00000447632 CARD11Q9BXL7 1154 aa12.07□□□□□ -0.48
TTC39A-212ENST00000447632 METP08581 1390 aa12.05□□□□□ -0.48
TTC39A-212ENST00000447632 NEXMIFQ5QGS0 1516 aa12.05□□□□□ -0.48
TTC39A-212ENST00000447632 AMOTL2Q9Y2J4 779 aa12.05□□□□□ -0.48
TTC39A-212ENST00000447632 ARHGAP23Q9P227 1491 aa12.05□□□□□ -0.48
TTC39A-212ENST00000447632 NPHP4O75161 1426 aaPredicted RBP12.05□□□□□ -0.48
TTC39A-212ENST00000447632 STAC3Q96MF2 364 aa12.04□□□□□ -0.48
TTC39A-212ENST00000447632 TBX22Q9Y458 520 aa12.04□□□□□ -0.48
TTC39A-212ENST00000447632 ROCK2O75116 1388 aaKnown RBP12.04□□□□□ -0.48
TTC39A-212ENST00000447632 PLEKHG1Q9ULL1 1385 aa12.04□□□□□ -0.48
TTC39A-212ENST00000447632 WAPLQ7Z5K2 1190 aa12.04□□□□□ -0.48
TTC39A-212ENST00000447632 PRAG1Q86YV5 1406 aa12.04□□□□□ -0.48
TTC39A-212ENST00000447632 SLIT1O75093 1534 aa12.03□□□□□ -0.48
TTC39A-212ENST00000447632 ZNF335Q9H4Z2 1342 aaPredicted RBP12.03□□□□□ -0.48
TTC39A-212ENST00000447632 KCNA6P17658 529 aa12.03□□□□□ -0.48
TTC39A-212ENST00000447632 DMRT2Q9Y5R5 561 aa12.02□□□□□ -0.49
TTC39A-212ENST00000447632 PIK3C2GO75747 1445 aa12.01□□□□□ -0.49
TTC39A-212ENST00000447632 ADAMTS13Q76LX8 1427 aa12.01□□□□□ -0.49
TTC39A-212ENST00000447632 ERICH6Q7L0X2 663 aa12.01□□□□□ -0.49
TTC39A-212ENST00000447632 POGKQ9P215 609 aa12□□□□□ -0.49
TTC39A-212ENST00000447632 PROSER2Q86WR7 435 aaPredicted RBP11.99□□□□□ -0.49
TTC39A-212ENST00000447632 PRAM1Q96QH2 718 aa11.99□□□□□ -0.49
TTC39A-212ENST00000447632 ZNF142P52746 1687 aaPredicted RBP11.99□□□□□ -0.49
TTC39A-212ENST00000447632 ST20-MTHFSA0A0A6YYL1 179 aa11.99□□□□□ -0.49
TTC39A-212ENST00000447632 C14orf37Q86TY3 774 aa11.99□□□□□ -0.49
TTC39A-212ENST00000447632 MYOM2P54296 1465 aa11.98□□□□□ -0.49
TTC39A-212ENST00000447632 NUTM2FA1L443 756 aa11.98□□□□□ -0.49
TTC39A-212ENST00000447632 PTPRUQ92729 1446 aa11.97□□□□□ -0.49
TTC39A-212ENST00000447632 PPLO60437 1756 aa11.97□□□□□ -0.49
TTC39A-212ENST00000447632 POLR3GLQ9BT43 218 aa11.97□□□□□ -0.49
TTC39A-212ENST00000447632 ALKQ9UM73 1620 aa11.97□□□□□ -0.49
TTC39A-212ENST00000447632 HSPA5P11021 654 aaKnown RBP11.96□□□□□ -0.49
TTC39A-212ENST00000447632 MINK1Q8N4C8 1332 aaPredicted RBP11.96□□□□□ -0.49
TTC39A-212ENST00000447632 NRXN1Q9ULB1 1477 aa11.96□□□□□ -0.49
TTC39A-212ENST00000447632 NEURL4Q96JN8 1562 aa11.96□□□□□ -0.5
TTC39A-212ENST00000447632 EIF4G2P78344 907 aaKnown RBP eCLIP11.96□□□□□ -0.5
TTC39A-212ENST00000447632 TSHZ2Q9NRE2 1034 aa11.96□□□□□ -0.5
TTC39A-212ENST00000447632 PLEKHH1Q9ULM0 1364 aa11.95□□□□□ -0.5
TTC39A-212ENST00000447632 MED14O60244 1454 aa11.95□□□□□ -0.5
TTC39A-212ENST00000447632 STRCQ7RTU9 1775 aa11.95□□□□□ -0.5
TTC39A-212ENST00000447632 YTHDC2Q9H6S0 1430 aaKnown RBP11.95□□□□□ -0.5
TTC39A-212ENST00000447632 ROBO2Q9HCK4 1378 aa11.95□□□□□ -0.5
TTC39A-212ENST00000447632 KDM5AP29375 1690 aaKnown RBP11.94□□□□□ -0.5
TTC39A-212ENST00000447632 DDX10Q13206 875 aaKnown RBP11.94□□□□□ -0.5
TTC39A-212ENST00000447632 LRPPRCP42704 1394 aaKnown RBP11.93□□□□□ -0.5
TTC39A-212ENST00000447632 USP47Q96K76 1375 aa11.93□□□□□ -0.5
TTC39A-212ENST00000447632 NRXN3Q9Y4C0 1643 aa11.92□□□□□ -0.5
TTC39A-212ENST00000447632 IFT172Q9UG01 1749 aa11.92□□□□□ -0.5
TTC39A-212ENST00000447632 IQGAP1P46940 1657 aa11.92□□□□□ -0.5
TTC39A-212ENST00000447632 SETBP1Q9Y6X0 1596 aa11.91□□□□□ -0.5
TTC39A-212ENST00000447632 ABCC11Q96J66 1382 aa11.91□□□□□ -0.5
TTC39A-212ENST00000447632 CENPJQ9HC77 1338 aaPredicted RBP11.91□□□□□ -0.5
TTC39A-212ENST00000447632 RALGAPBQ86X10 1494 aa11.9□□□□□ -0.5
TTC39A-212ENST00000447632 ASXL1Q8IXJ9 1541 aa11.9□□□□□ -0.5
TTC39A-212ENST00000447632 TMEM94Q12767 1356 aa11.9□□□□□ -0.5
TTC39A-212ENST00000447632 C11orf95C9JLR9 678 aaPredicted RBP11.9□□□□□ -0.51
TTC39A-212ENST00000447632 ADGRB1O14514 1584 aa11.89□□□□□ -0.51
TTC39A-212ENST00000447632 GPRASP1Q5JY77 1395 aa11.89□□□□□ -0.51
TTC39A-212ENST00000447632 CABP2Q9NPB3 220 aa11.89□□□□□ -0.51
TTC39A-212ENST00000447632 SRPK2P78362 688 aaKnown RBP11.88□□□□□ -0.51
TTC39A-212ENST00000447632 TESK2Q96S53 571 aa11.88□□□□□ -0.51
TTC39A-212ENST00000447632 POLR1AO95602 1720 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms