RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 IQGAP1P46940 1657 aa9.51□□□□□ -0.89
PTPN3-205ENST00000447271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.51□□□□□ -0.89
PTPN3-205ENST00000447271 ZBTB47Q9UFB7 747 aaPredicted RBP9.5□□□□□ -0.89
PTPN3-205ENST00000447271 A2ML1A8K2U0 1454 aa9.5□□□□□ -0.89
PTPN3-205ENST00000447271 HSPA6P17066 643 aa9.49□□□□□ -0.89
PTPN3-205ENST00000447271 POTEJP0CG39 1038 aa9.48□□□□□ -0.89
PTPN3-205ENST00000447271 C8orf37Q96NL8 207 aa9.48□□□□□ -0.89
PTPN3-205ENST00000447271 PPP1R1BQ9UD71 204 aaPredicted RBP9.48□□□□□ -0.89
PTPN3-205ENST00000447271 RTEL1-TNFRSF6BF6WH68 1400 aa9.48□□□□□ -0.89
PTPN3-205ENST00000447271 POTEFA5A3E0 1075 aa9.47□□□□□ -0.89
PTPN3-205ENST00000447271 FAM212AQ96EL1 285 aa9.47□□□□□ -0.89
PTPN3-205ENST00000447271 METRNQ9UJH8 293 aa9.47□□□□□ -0.89
PTPN3-205ENST00000447271 SCAPERQ9BY12 1400 aa9.47□□□□□ -0.89
PTPN3-205ENST00000447271 LRRC9Q6ZRR7 1453 aa9.47□□□□□ -0.89
PTPN3-205ENST00000447271 SCAF11Q99590 1463 aaKnown RBP9.47□□□□□ -0.89
PTPN3-205ENST00000447271 ADGBQ8N7X0 1667 aa9.46□□□□□ -0.89
PTPN3-205ENST00000447271 IFNL1Q8IU54 200 aa9.46□□□□□ -0.9
PTPN3-205ENST00000447271 MYT1LQ9UL68 1186 aa9.46□□□□□ -0.9
PTPN3-205ENST00000447271 MED14O60244 1454 aa9.46□□□□□ -0.9
PTPN3-205ENST00000447271 IFNLR1Q8IU57 520 aaPredicted RBP9.45□□□□□ -0.9
PTPN3-205ENST00000447271 OTUD5Q96G74 571 aa9.45□□□□□ -0.9
PTPN3-205ENST00000447271 PCDHB13Q9Y5F0 798 aa9.45□□□□□ -0.9
PTPN3-205ENST00000447271 NINLQ9Y2I6 1382 aa9.45□□□□□ -0.9
PTPN3-205ENST00000447271 TTLL13PA6NNM8 815 aa9.44□□□□□ -0.9
PTPN3-205ENST00000447271 WWC3Q9ULE0 1092 aa9.44□□□□□ -0.9
PTPN3-205ENST00000447271 ATP10BO94823 1461 aa9.44□□□□□ -0.9
PTPN3-205ENST00000447271 REREQ9P2R6 1566 aa9.44□□□□□ -0.9
PTPN3-205ENST00000447271 DEPDC5O75140 1603 aa9.44□□□□□ -0.9
PTPN3-205ENST00000447271 DIP2CQ9Y2E4 1556 aa9.43□□□□□ -0.9
PTPN3-205ENST00000447271 UGGT2Q9NYU1 1516 aa9.43□□□□□ -0.9
PTPN3-205ENST00000447271 BIVM-ERCC5R4GMW8 1640 aa9.42□□□□□ -0.9
PTPN3-205ENST00000447271 KDM5DQ9BY66 1539 aa9.42□□□□□ -0.9
PTPN3-205ENST00000447271 PYGBP11216 843 aa9.42□□□□□ -0.9
PTPN3-205ENST00000447271 TIE1P35590 1138 aa9.42□□□□□ -0.9
PTPN3-205ENST00000447271 CLTCQ00610 1675 aaKnown RBP9.42□□□□□ -0.9
PTPN3-205ENST00000447271 ITSN2Q9NZM3 1697 aa9.42□□□□□ -0.9
PTPN3-205ENST00000447271 ABCC1P33527 1531 aa9.41□□□□□ -0.9
PTPN3-205ENST00000447271 SLC39A7Q92504 469 aa9.41□□□□□ -0.9
PTPN3-205ENST00000447271 FAM161AQ3B820 660 aa9.4□□□□□ -0.9
PTPN3-205ENST00000447271 DCAF8Q5TAQ9 597 aa9.4□□□□□ -0.9
PTPN3-205ENST00000447271 KLHL34Q8N239 644 aa9.4□□□□□ -0.9
PTPN3-205ENST00000447271 TNS2Q63HR2 1409 aa9.39□□□□□ -0.91
PTPN3-205ENST00000447271 SGIP1Q9BQI5 828 aa9.39□□□□□ -0.91
PTPN3-205ENST00000447271 SLAIN2Q9P270 581 aa9.39□□□□□ -0.91
PTPN3-205ENST00000447271 C7P10643 843 aa9.38□□□□□ -0.91
PTPN3-205ENST00000447271 COLQQ9Y215 455 aaPredicted RBP9.38□□□□□ -0.91
PTPN3-205ENST00000447271 ABCA6Q8N139 1617 aa9.38□□□□□ -0.91
PTPN3-205ENST00000447271 IGF1RP08069 1367 aa9.37□□□□□ -0.91
PTPN3-205ENST00000447271 BAG6P46379 1132 aa9.37□□□□□ -0.91
PTPN3-205ENST00000447271 TRPC5Q9UL62 973 aaPredicted RBP9.37□□□□□ -0.91
PTPN3-205ENST00000447271 PCDHB8Q9UN66 801 aa9.37□□□□□ -0.91
PTPN3-205ENST00000447271 TMEM94Q12767 1356 aa9.37□□□□□ -0.91
PTPN3-205ENST00000447271 TRIM35Q9UPQ4 493 aa9.36□□□□□ -0.91
PTPN3-205ENST00000447271 KIF14Q15058 1648 aa9.35□□□□□ -0.91
PTPN3-205ENST00000447271 THEMISQ8N1K5 641 aaPredicted RBP9.35□□□□□ -0.91
PTPN3-205ENST00000447271 USP21Q9UK80 565 aa9.35□□□□□ -0.91
PTPN3-205ENST00000447271 ZC3H13Q5T200 1668 aaKnown RBP9.35□□□□□ -0.91
PTPN3-205ENST00000447271 UNC13BO14795 1591 aa9.34□□□□□ -0.91
PTPN3-205ENST00000447271 PLCH2O75038 1416 aa9.34□□□□□ -0.91
PTPN3-205ENST00000447271 TMEM106CQ9BVX2 250 aa9.33□□□□□ -0.92
PTPN3-205ENST00000447271 MAP3K1Q13233 1512 aa9.32□□□□□ -0.92
PTPN3-205ENST00000447271 DNAJC5GQ8N7S2 189 aa9.32□□□□□ -0.92
PTPN3-205ENST00000447271 SPON1Q9HCB6 807 aa9.32□□□□□ -0.92
PTPN3-205ENST00000447271 BRWD3Q6RI45 1802 aa9.32□□□□□ -0.92
PTPN3-205ENST00000447271 ZNF518AQ6AHZ1 1483 aa9.32□□□□□ -0.92
PTPN3-205ENST00000447271 DIP2AQ14689 1571 aa9.32□□□□□ -0.92
PTPN3-205ENST00000447271 AHDC1Q5TGY3 1603 aaPredicted RBP9.31□□□□□ -0.92
PTPN3-205ENST00000447271 AFAP1Q8N556 730 aa9.31□□□□□ -0.92
PTPN3-205ENST00000447271 SHANK3Q9BYB0 1731 aa9.31□□□□□ -0.92
PTPN3-205ENST00000447271 EN1Q05925 392 aaPredicted RBP9.3□□□□□ -0.92
PTPN3-205ENST00000447271 SPOCK2Q92563 424 aa9.3□□□□□ -0.92
PTPN3-205ENST00000447271 FAM135AQ9P2D6 1515 aa9.3□□□□□ -0.92
PTPN3-205ENST00000447271 RALGAPBQ86X10 1494 aa9.29□□□□□ -0.92
PTPN3-205ENST00000447271 MSH6P52701 1360 aa9.29□□□□□ -0.92
PTPN3-205ENST00000447271 CARMIL1Q5VZK9 1371 aa9.29□□□□□ -0.92
PTPN3-205ENST00000447271 AATKQ6ZMQ8 1374 aa9.29□□□□□ -0.92
PTPN3-205ENST00000447271 FAM83GA6ND36 823 aa9.29□□□□□ -0.92
PTPN3-205ENST00000447271 ADAMTS2O95450 1211 aa9.29□□□□□ -0.92
PTPN3-205ENST00000447271 ATP7AQ04656 1500 aa9.29□□□□□ -0.92
PTPN3-205ENST00000447271 ATRNO75882 1429 aa9.29□□□□□ -0.92
PTPN3-205ENST00000447271 UGGT1Q9NYU2 1555 aa9.29□□□□□ -0.92
PTPN3-205ENST00000447271 GSE1Q14687 1217 aa9.28□□□□□ -0.92
PTPN3-205ENST00000447271 PROSER2Q86WR7 435 aaPredicted RBP9.28□□□□□ -0.92
PTPN3-205ENST00000447271 KCNQ2O43526 872 aa9.27□□□□□ -0.93
PTPN3-205ENST00000447271 APLP1P51693 650 aa9.27□□□□□ -0.93
PTPN3-205ENST00000447271 TIAM1Q13009 1591 aa9.27□□□□□ -0.93
PTPN3-205ENST00000447271 TNRQ92752 1358 aa9.25□□□□□ -0.93
PTPN3-205ENST00000447271 CHRM1P11229 460 aaPredicted RBP9.25□□□□□ -0.93
PTPN3-205ENST00000447271 IER5LQ5T953 404 aa9.25□□□□□ -0.93
PTPN3-205ENST00000447271 ARHGAP23Q9P227 1491 aa9.25□□□□□ -0.93
PTPN3-205ENST00000447271 PCNTO95613 3336 aa9.25□□□□□ -0.93
PTPN3-205ENST00000447271 SPHKAPQ2M3C7 1700 aa9.25□□□□□ -0.93
PTPN3-205ENST00000447271 IRX5P78411 483 aaPredicted RBP9.24□□□□□ -0.93
PTPN3-205ENST00000447271 FAM9AQ8IZU1 332 aaPredicted RBP9.24□□□□□ -0.93
PTPN3-205ENST00000447271 GOLGA3Q08378 1498 aa9.23□□□□□ -0.93
PTPN3-205ENST00000447271 CIZ1Q9ULV3 898 aaPredicted RBP9.23□□□□□ -0.93
PTPN3-205ENST00000447271 MLLT1Q03111 559 aaPredicted RBP9.22□□□□□ -0.93
PTPN3-205ENST00000447271 LCE2DQ5TA82 110 aaPredicted RBP9.22□□□□□ -0.93
PTPN3-205ENST00000447271 MLH3Q9UHC1 1453 aa9.21□□□□□ -0.93
PTPN3-205ENST00000447271 ABCC3O15438 1527 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms