RNA–Protein interactions for RNA: ENST00000446916.2

ATRN-202, Transcript of attractin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRN, Length 3,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-202ENST00000446916 ABCC2Q92887 1545 aa18.69■□□□□ 0.58
ATRN-202ENST00000446916 CENPJQ9HC77 1338 aaPredicted RBP18.69■□□□□ 0.58
ATRN-202ENST00000446916 SLC26A8Q96RN1 970 aa18.68■□□□□ 0.58
ATRN-202ENST00000446916 MAPK8IP3Q9UPT6 1336 aa18.67■□□□□ 0.58
ATRN-202ENST00000446916 RALBP1Q15311 655 aa18.67■□□□□ 0.58
ATRN-202ENST00000446916 NLRP13Q86W25 1043 aa18.67■□□□□ 0.58
ATRN-202ENST00000446916 NUDCQ9Y266 331 aa18.67■□□□□ 0.58
ATRN-202ENST00000446916 NCLP19338 710 aaKnown RBP18.67■□□□□ 0.58
ATRN-202ENST00000446916 IDI1Q13907 227 aa18.67■□□□□ 0.58
ATRN-202ENST00000446916 ANP32BQ92688 251 aaKnown RBP18.66■□□□□ 0.58
ATRN-202ENST00000446916 USP35Q9P2H5 1018 aa18.66■□□□□ 0.58
ATRN-202ENST00000446916 CHD1O14646 1710 aa18.66■□□□□ 0.58
ATRN-202ENST00000446916 NGDNQ8NEJ9 315 aaKnown RBP18.65■□□□□ 0.58
ATRN-202ENST00000446916 ERBINQ96RT1 1412 aa18.65■□□□□ 0.58
ATRN-202ENST00000446916 ADGRF5Q8IZF2 1346 aa18.64■□□□□ 0.57
ATRN-202ENST00000446916 RRP7AQ9Y3A4 280 aaKnown RBP18.63■□□□□ 0.57
ATRN-202ENST00000446916 DENND4BO75064 1496 aaPredicted RBP18.63■□□□□ 0.57
ATRN-202ENST00000446916 TXNDC2Q86VQ3 553 aa18.63■□□□□ 0.57
ATRN-202ENST00000446916 SLC12A5Q9H2X9 1139 aa18.63■□□□□ 0.57
ATRN-202ENST00000446916 TERF2IPQ9NYB0 399 aa18.63■□□□□ 0.57
ATRN-202ENST00000446916 EVC2Q86UK5 1308 aa18.62■□□□□ 0.57
ATRN-202ENST00000446916 TCOF1Q13428 1488 aaKnown RBP18.62■□□□□ 0.57
ATRN-202ENST00000446916 PRAM1Q96QH2 718 aa18.62■□□□□ 0.57
ATRN-202ENST00000446916 TCERG1O14776 1098 aaKnown RBP18.61■□□□□ 0.57
ATRN-202ENST00000446916 DHX29Q7Z478 1369 aaKnown RBP18.61■□□□□ 0.57
ATRN-202ENST00000446916 GGNBP2Q9H3C7 697 aa18.59■□□□□ 0.57
ATRN-202ENST00000446916 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.58■□□□□ 0.57
ATRN-202ENST00000446916 SLC52A1Q9NWF4 448 aa18.58■□□□□ 0.57
ATRN-202ENST00000446916 LTV1Q96GA3 475 aaPredicted RBP18.58■□□□□ 0.57
ATRN-202ENST00000446916 RPRD2Q5VT52 1461 aaKnown RBP18.58■□□□□ 0.56
ATRN-202ENST00000446916 MYBBP1AQ9BQG0 1328 aaKnown RBP18.58■□□□□ 0.56
ATRN-202ENST00000446916 RBM33Q96EV2 1170 aaKnown RBP18.56■□□□□ 0.56
ATRN-202ENST00000446916 CNTLNQ9NXG0 1405 aa18.55■□□□□ 0.56
ATRN-202ENST00000446916 RCAN3Q9UKA8 241 aa18.55■□□□□ 0.56
ATRN-202ENST00000446916 ITSN2Q9NZM3 1697 aa18.55■□□□□ 0.56
ATRN-202ENST00000446916 ZBED9Q6R2W3 1325 aa18.55■□□□□ 0.56
ATRN-202ENST00000446916 NUTM2GQ5VZR2 741 aa18.54■□□□□ 0.56
ATRN-202ENST00000446916 WAPLQ7Z5K2 1190 aa18.53■□□□□ 0.56
ATRN-202ENST00000446916 ABCA8O94911 1581 aa18.53■□□□□ 0.56
ATRN-202ENST00000446916 KDM5BQ9UGL1 1544 aa18.52■□□□□ 0.56
ATRN-202ENST00000446916 BECN1Q14457 450 aa18.51■□□□□ 0.55
ATRN-202ENST00000446916 BACH2Q9BYV9 841 aa18.51■□□□□ 0.55
ATRN-202ENST00000446916 RBM10P98175 930 aaKnown RBP18.5■□□□□ 0.55
ATRN-202ENST00000446916 CGNL1Q0VF96 1302 aa18.5■□□□□ 0.55
ATRN-202ENST00000446916 PMFBP1Q8TBY8 1022 aa18.49■□□□□ 0.55
ATRN-202ENST00000446916 A2MP01023 1474 aa18.49■□□□□ 0.55
ATRN-202ENST00000446916 APAF1O14727 1248 aa18.49■□□□□ 0.55
ATRN-202ENST00000446916 STAC3Q96MF2 364 aa18.49■□□□□ 0.55
ATRN-202ENST00000446916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.49■□□□□ 0.55
ATRN-202ENST00000446916 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.49■□□□□ 0.55
ATRN-202ENST00000446916 FOXD4L1Q9NU39 408 aa18.48■□□□□ 0.55
ATRN-202ENST00000446916 ABCC10Q5T3U5 1492 aa18.48■□□□□ 0.55
ATRN-202ENST00000446916 DNTTIP2Q5QJE6 756 aaKnown RBP18.47■□□□□ 0.55
ATRN-202ENST00000446916 CRBNQ96SW2 442 aa18.47■□□□□ 0.55
ATRN-202ENST00000446916 FAM43AQ8N2R8 423 aa18.47■□□□□ 0.55
ATRN-202ENST00000446916 DNMT1P26358 1616 aaKnown RBP18.47■□□□□ 0.55
ATRN-202ENST00000446916 PZPP20742 1482 aa18.47■□□□□ 0.55
ATRN-202ENST00000446916 ZNF518AQ6AHZ1 1483 aa18.47■□□□□ 0.55
ATRN-202ENST00000446916 CFAP65Q6ZU64 1925 aaKnown RBP18.46■□□□□ 0.55
ATRN-202ENST00000446916 CABP1Q9NZU7 370 aa18.46■□□□□ 0.55
ATRN-202ENST00000446916 FAM135AQ9P2D6 1515 aa18.46■□□□□ 0.55
ATRN-202ENST00000446916 NOS1P29475 1434 aa18.46■□□□□ 0.55
ATRN-202ENST00000446916 RRAGDQ9NQL2 400 aaPredicted RBP18.45■□□□□ 0.54
ATRN-202ENST00000446916 KDM6BO15054 1643 aa18.45■□□□□ 0.54
ATRN-202ENST00000446916 CDCA7LQ96GN5 454 aa18.45■□□□□ 0.54
ATRN-202ENST00000446916 RRP1P56182 461 aaKnown RBP18.45■□□□□ 0.54
ATRN-202ENST00000446916 PLCB2Q00722 1185 aa18.45■□□□□ 0.54
ATRN-202ENST00000446916 AMPHP49418 695 aa18.44■□□□□ 0.54
ATRN-202ENST00000446916 FTSJ3Q8IY81 847 aaKnown RBP18.44■□□□□ 0.54
ATRN-202ENST00000446916 MBD5Q9P267 1494 aa18.43■□□□□ 0.54
ATRN-202ENST00000446916 CDK19Q9BWU1 502 aa18.43■□□□□ 0.54
ATRN-202ENST00000446916 BCL2L13Q9BXK5 485 aa18.43■□□□□ 0.54
ATRN-202ENST00000446916 ADAMTS8Q9UP79 889 aa18.43■□□□□ 0.54
ATRN-202ENST00000446916 DUOX2Q9NRD8 1548 aa18.43■□□□□ 0.54
ATRN-202ENST00000446916 MTHFSP49914 203 aa18.43■□□□□ 0.54
ATRN-202ENST00000446916 FAM13BQ9NYF5 915 aa18.43■□□□□ 0.54
ATRN-202ENST00000446916 GOLGA6L3A6NEY3 463 aa18.42■□□□□ 0.54
ATRN-202ENST00000446916 COG3Q96JB2 828 aa18.42■□□□□ 0.54
ATRN-202ENST00000446916 ELL2O00472 640 aaPredicted RBP18.42■□□□□ 0.54
ATRN-202ENST00000446916 THEMISQ8N1K5 641 aaPredicted RBP18.42■□□□□ 0.54
ATRN-202ENST00000446916 CLUAP1Q96AJ1 413 aa18.41■□□□□ 0.54
ATRN-202ENST00000446916 TTC37Q6PGP7 1564 aa18.41■□□□□ 0.54
ATRN-202ENST00000446916 HMOX1P09601 288 aa18.4■□□□□ 0.54
ATRN-202ENST00000446916 GOLGA2Q08379 1002 aa18.39■□□□□ 0.53
ATRN-202ENST00000446916 L1TD1Q5T7N2 865 aaKnown RBP18.39■□□□□ 0.53
ATRN-202ENST00000446916 CSB-PGBD3P0DP91 1061 aa18.39■□□□□ 0.53
ATRN-202ENST00000446916 PPP2R1AP30153 589 aa18.38■□□□□ 0.53
ATRN-202ENST00000446916 PTMAP06454 111 aaKnown RBP18.38■□□□□ 0.53
ATRN-202ENST00000446916 PANK2Q9BZ23 570 aa18.38■□□□□ 0.53
ATRN-202ENST00000446916 DISP3Q9P2K9 1392 aa18.36■□□□□ 0.53
ATRN-202ENST00000446916 SHANK2Q9UPX8 1470 aa18.36■□□□□ 0.53
ATRN-202ENST00000446916 RPGRIP1LQ68CZ1 1315 aa18.35■□□□□ 0.53
ATRN-202ENST00000446916 PSME1Q06323 249 aa18.35■□□□□ 0.53
ATRN-202ENST00000446916 MAPK8IP2Q13387 824 aaPredicted RBP18.35■□□□□ 0.53
ATRN-202ENST00000446916 XPCQ01831 940 aaPredicted RBP18.35■□□□□ 0.53
ATRN-202ENST00000446916 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
ATRN-202ENST00000446916 YEATS2Q9ULM3 1422 aa18.35■□□□□ 0.53
ATRN-202ENST00000446916 PRDM10Q9NQV6 1147 aa18.34■□□□□ 0.53
ATRN-202ENST00000446916 SAMD9LQ8IVG5 1584 aa18.33■□□□□ 0.53
ATRN-202ENST00000446916 RTF1Q92541 710 aaKnown RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms