RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 POLR1AO95602 1720 aaPredicted RBP12.82□□□□□ -0.36
FXR1-203ENST00000445140 DIP2AQ14689 1571 aa12.81□□□□□ -0.36
FXR1-203ENST00000445140 KDM4FA0A1W2PPD8 638 aa12.8□□□□□ -0.36
FXR1-203ENST00000445140 SETBP1Q9Y6X0 1596 aa12.8□□□□□ -0.36
FXR1-203ENST00000445140 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
FXR1-203ENST00000445140 SETD1AO15047 1707 aaKnown RBP12.79□□□□□ -0.36
FXR1-203ENST00000445140 MLECQ14165 292 aa12.78□□□□□ -0.36
FXR1-203ENST00000445140 PRAG1Q86YV5 1406 aa12.78□□□□□ -0.36
FXR1-203ENST00000445140 MED14O60244 1454 aa12.77□□□□□ -0.36
FXR1-203ENST00000445140 TRPM1Q7Z4N2 1603 aa12.76□□□□□ -0.37
FXR1-203ENST00000445140 NRXN3Q9Y4C0 1643 aa12.76□□□□□ -0.37
FXR1-203ENST00000445140 ZEB1P37275 1124 aaPredicted RBP12.75□□□□□ -0.37
FXR1-203ENST00000445140 LMTK3Q96Q04 1460 aa12.75□□□□□ -0.37
FXR1-203ENST00000445140 FBXO31Q5XUX0 539 aaPredicted RBP12.75□□□□□ -0.37
FXR1-203ENST00000445140 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
FXR1-203ENST00000445140 KNDC1Q76NI1 1749 aa12.74□□□□□ -0.37
FXR1-203ENST00000445140 IDI1Q13907 227 aa12.74□□□□□ -0.37
FXR1-203ENST00000445140 TMEM2Q9UHN6 1383 aa12.74□□□□□ -0.37
FXR1-203ENST00000445140 PIK3C2GO75747 1445 aa12.73□□□□□ -0.37
FXR1-203ENST00000445140 RALGAPBQ86X10 1494 aa12.73□□□□□ -0.37
FXR1-203ENST00000445140 FOXD1Q16676 465 aa12.72□□□□□ -0.37
FXR1-203ENST00000445140 RIMS2Q9UQ26 1411 aa12.71□□□□□ -0.37
FXR1-203ENST00000445140 GPRASP1Q5JY77 1395 aa12.71□□□□□ -0.38
FXR1-203ENST00000445140 TONSLQ96HA7 1378 aa12.71□□□□□ -0.38
FXR1-203ENST00000445140 PLEKHG1Q9ULL1 1385 aa12.71□□□□□ -0.38
FXR1-203ENST00000445140 SCAF11Q99590 1463 aaKnown RBP12.71□□□□□ -0.38
FXR1-203ENST00000445140 IQGAP1P46940 1657 aa12.71□□□□□ -0.38
FXR1-203ENST00000445140 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.7□□□□□ -0.38
FXR1-203ENST00000445140 NWD1Q149M9 1564 aa12.69□□□□□ -0.38
FXR1-203ENST00000445140 STRCQ7RTU9 1775 aa12.69□□□□□ -0.38
FXR1-203ENST00000445140 THEMISQ8N1K5 641 aaPredicted RBP12.69□□□□□ -0.38
FXR1-203ENST00000445140 ADGRB1O14514 1584 aa12.68□□□□□ -0.38
FXR1-203ENST00000445140 HDGFP51858 240 aaKnown RBP12.68□□□□□ -0.38
FXR1-203ENST00000445140 PRKCSHP14314 528 aaPredicted RBP12.67□□□□□ -0.38
FXR1-203ENST00000445140 CEBPAP49715 358 aaPredicted RBP12.67□□□□□ -0.38
FXR1-203ENST00000445140 DLC1Q96QB1 1528 aa12.67□□□□□ -0.38
FXR1-203ENST00000445140 PIK3R4Q99570 1358 aa12.67□□□□□ -0.38
FXR1-203ENST00000445140 ALKQ9UM73 1620 aa12.67□□□□□ -0.38
FXR1-203ENST00000445140 XRN1Q8IZH2 1706 aaKnown RBP12.67□□□□□ -0.38
FXR1-203ENST00000445140 SIN3AQ96ST3 1273 aa12.66□□□□□ -0.38
FXR1-203ENST00000445140 ASXL1Q8IXJ9 1541 aa12.65□□□□□ -0.38
FXR1-203ENST00000445140 VGFO15240 615 aaPredicted RBP12.65□□□□□ -0.39
FXR1-203ENST00000445140 PPP1R15AO75807 674 aaPredicted RBP12.65□□□□□ -0.39
FXR1-203ENST00000445140 TECPR2O15040 1411 aa12.64□□□□□ -0.39
FXR1-203ENST00000445140 CPS1P31327 1500 aa12.64□□□□□ -0.39
FXR1-203ENST00000445140 CHD2O14647 1828 aaKnown RBP12.64□□□□□ -0.39
FXR1-203ENST00000445140 L3MBTL2Q969R5 705 aa12.64□□□□□ -0.39
FXR1-203ENST00000445140 ADAMTS13Q76LX8 1427 aa12.64□□□□□ -0.39
FXR1-203ENST00000445140 ARHGEF28Q8N1W1 1705 aaKnown RBP12.62□□□□□ -0.39
FXR1-203ENST00000445140 NPHP4O75161 1426 aaPredicted RBP12.61□□□□□ -0.39
FXR1-203ENST00000445140 C14orf93Q9H972 538 aaKnown RBP12.6□□□□□ -0.39
FXR1-203ENST00000445140 PTCH1Q13635 1447 aa12.59□□□□□ -0.39
FXR1-203ENST00000445140 ADGRB2O60241 1585 aa12.59□□□□□ -0.39
FXR1-203ENST00000445140 EID1Q9Y6B2 187 aa12.58□□□□□ -0.4
FXR1-203ENST00000445140 NKTRP30414 1462 aaKnown RBP12.58□□□□□ -0.4
FXR1-203ENST00000445140 SIRT1Q96EB6 747 aa12.58□□□□□ -0.4
FXR1-203ENST00000445140 TBX22Q9Y458 520 aa12.57□□□□□ -0.4
FXR1-203ENST00000445140 SBNO2Q9Y2G9 1366 aa12.57□□□□□ -0.4
FXR1-203ENST00000445140 ANKLE2Q86XL3 938 aa12.57□□□□□ -0.4
FXR1-203ENST00000445140 STAG3Q9UJ98 1225 aa12.57□□□□□ -0.4
FXR1-203ENST00000445140 FAM135BQ49AJ0 1406 aa12.57□□□□□ -0.4
FXR1-203ENST00000445140 ADGRF5Q8IZF2 1346 aa12.57□□□□□ -0.4
FXR1-203ENST00000445140 NEUROD1Q13562 356 aa12.56□□□□□ -0.4
FXR1-203ENST00000445140 LRPPRCP42704 1394 aaKnown RBP12.56□□□□□ -0.4
FXR1-203ENST00000445140 DCAF11Q8TEB1 546 aa12.56□□□□□ -0.4
FXR1-203ENST00000445140 NCOA3Q9Y6Q9 1424 aa12.56□□□□□ -0.4
FXR1-203ENST00000445140 LTKP29376 864 aa12.55□□□□□ -0.4
FXR1-203ENST00000445140 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
FXR1-203ENST00000445140 ABCC11Q96J66 1382 aa12.55□□□□□ -0.4
FXR1-203ENST00000445140 ZNF326Q5BKZ1 582 aaKnown RBP12.55□□□□□ -0.4
FXR1-203ENST00000445140 NBPF8Q3BBV2 869 aa12.54□□□□□ -0.4
FXR1-203ENST00000445140 TXNDC2Q86VQ3 553 aa12.53□□□□□ -0.4
FXR1-203ENST00000445140 YTHDC2Q9H6S0 1430 aaKnown RBP12.53□□□□□ -0.4
FXR1-203ENST00000445140 QRICH2Q9H0J4 1663 aa12.53□□□□□ -0.4
FXR1-203ENST00000445140 STRCP1A6NGW2 1772 aa12.52□□□□□ -0.41
FXR1-203ENST00000445140 RGL3Q3MIN7 710 aa12.52□□□□□ -0.41
FXR1-203ENST00000445140 EIF3AQ14152 1382 aaKnown RBP12.51□□□□□ -0.41
FXR1-203ENST00000445140 CHGAP10645 457 aaKnown RBP12.51□□□□□ -0.41
FXR1-203ENST00000445140 DMRT2Q9Y5R5 561 aa12.51□□□□□ -0.41
FXR1-203ENST00000445140 ROCK2O75116 1388 aaKnown RBP12.5□□□□□ -0.41
FXR1-203ENST00000445140 IQSEC2Q5JU85 1478 aa12.5□□□□□ -0.41
FXR1-203ENST00000445140 PTPRUQ92729 1446 aa12.49□□□□□ -0.41
FXR1-203ENST00000445140 CDC42BPGQ6DT37 1551 aa12.49□□□□□ -0.41
FXR1-203ENST00000445140 XIRP1Q702N8 1843 aaKnown RBP12.48□□□□□ -0.41
FXR1-203ENST00000445140 METP08581 1390 aa12.48□□□□□ -0.41
FXR1-203ENST00000445140 PUS7Q96PZ0 661 aaKnown RBP12.46□□□□□ -0.41
FXR1-203ENST00000445140 DCCP43146 1447 aa12.46□□□□□ -0.41
FXR1-203ENST00000445140 LTBP4Q8N2S1 1624 aa12.46□□□□□ -0.41
FXR1-203ENST00000445140 TOPAZ1Q8N9V7 1692 aa12.46□□□□□ -0.41
FXR1-203ENST00000445140 NALCNQ8IZF0 1738 aa12.46□□□□□ -0.42
FXR1-203ENST00000445140 USP47Q96K76 1375 aa12.45□□□□□ -0.42
FXR1-203ENST00000445140 FMN2Q9NZ56 1722 aa12.45□□□□□ -0.42
FXR1-203ENST00000445140 CFAP70Q5T0N1 1121 aa12.45□□□□□ -0.42
FXR1-203ENST00000445140 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.45□□□□□ -0.42
FXR1-203ENST00000445140 KCNA6P17658 529 aa12.44□□□□□ -0.42
FXR1-203ENST00000445140 PPP4R3CPQ6ZMV5 832 aa12.44□□□□□ -0.42
FXR1-203ENST00000445140 ITSN1Q15811 1721 aa12.44□□□□□ -0.42
FXR1-203ENST00000445140 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
FXR1-203ENST00000445140 NCKAP5LQ9HCH0 1330 aa12.43□□□□□ -0.42
FXR1-203ENST00000445140 NPM3O75607 178 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms