RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 HMMRO75330 724 aa9.93□□□□□ -0.82
RIF1-205ENST00000444746 XPCQ01831 940 aaPredicted RBP9.93□□□□□ -0.82
RIF1-205ENST00000444746 TEFQ10587 303 aa9.93□□□□□ -0.82
RIF1-205ENST00000444746 SAMD1Q6SPF0 538 aaPredicted RBP9.93□□□□□ -0.82
RIF1-205ENST00000444746 OSCARQ8IYS5 282 aa9.93□□□□□ -0.82
RIF1-205ENST00000444746 E9PSI1 815 aa9.93□□□□□ -0.82
RIF1-205ENST00000444746 FKBP5Q13451 457 aaPredicted RBP9.93□□□□□ -0.82
RIF1-205ENST00000444746 GAPVD1Q14C86 1478 aa9.93□□□□□ -0.82
RIF1-205ENST00000444746 FAM161AQ3B820 660 aa9.93□□□□□ -0.82
RIF1-205ENST00000444746 MTHFSP49914 203 aa9.93□□□□□ -0.82
RIF1-205ENST00000444746 MTMR7Q9Y216 660 aa9.93□□□□□ -0.82
RIF1-205ENST00000444746 VPS53Q5VIR6 699 aa9.93□□□□□ -0.82
RIF1-205ENST00000444746 TSPYL4Q9UJ04 414 aa9.92□□□□□ -0.82
RIF1-205ENST00000444746 FGD6Q6ZV73 1430 aa9.92□□□□□ -0.82
RIF1-205ENST00000444746 SLC12A5Q9H2X9 1139 aa9.92□□□□□ -0.82
RIF1-205ENST00000444746 WWC1Q8IX03 1113 aa9.92□□□□□ -0.82
RIF1-205ENST00000444746 RASSF8Q8NHQ8 419 aa9.92□□□□□ -0.82
RIF1-205ENST00000444746 PDE3BQ13370 1112 aa9.92□□□□□ -0.82
RIF1-205ENST00000444746 CENPQQ7L2Z9 268 aaPredicted RBP9.92□□□□□ -0.82
RIF1-205ENST00000444746 MAP4K4O95819 1239 aaPredicted RBP9.92□□□□□ -0.82
RIF1-205ENST00000444746 MCTP1Q6DN14 999 aa9.91□□□□□ -0.82
RIF1-205ENST00000444746 DZIP1LQ8IYY4 767 aaKnown RBP9.91□□□□□ -0.82
RIF1-205ENST00000444746 STK11IPQ8N1F8 1099 aa9.91□□□□□ -0.82
RIF1-205ENST00000444746 FYB1O15117 783 aa9.91□□□□□ -0.82
RIF1-205ENST00000444746 ZBED9Q6R2W3 1325 aa9.91□□□□□ -0.82
RIF1-205ENST00000444746 KLHL34Q8N239 644 aa9.91□□□□□ -0.82
RIF1-205ENST00000444746 C9orf78Q9NZ63 289 aaPredicted RBP9.91□□□□□ -0.82
RIF1-205ENST00000444746 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.91□□□□□ -0.82
RIF1-205ENST00000444746 ANO2Q9NQ90 1003 aa9.91□□□□□ -0.82
RIF1-205ENST00000444746 GPATCH3Q96I76 525 aa9.9□□□□□ -0.82
RIF1-205ENST00000444746 ARAP1Q96P48 1450 aa9.9□□□□□ -0.83
RIF1-205ENST00000444746 EXOSC9Q06265 439 aaKnown RBP9.9□□□□□ -0.83
RIF1-205ENST00000444746 RSPH4AQ5TD94 716 aa9.9□□□□□ -0.83
RIF1-205ENST00000444746 CHMP4CQ96CF2 233 aa9.9□□□□□ -0.83
RIF1-205ENST00000444746 NLRP2Q9NX02 1062 aa9.9□□□□□ -0.83
RIF1-205ENST00000444746 PRAM1Q96QH2 718 aa9.9□□□□□ -0.83
RIF1-205ENST00000444746 LMOD3Q0VAK6 560 aa9.89□□□□□ -0.83
RIF1-205ENST00000444746 RAPGEF3O95398 923 aa9.89□□□□□ -0.83
RIF1-205ENST00000444746 DDX49Q9Y6V7 483 aaKnown RBP9.89□□□□□ -0.83
RIF1-205ENST00000444746 TTC5Q8N0Z6 440 aa9.89□□□□□ -0.83
RIF1-205ENST00000444746 CFTRP13569 1480 aa9.89□□□□□ -0.83
RIF1-205ENST00000444746 PES1O00541 588 aaKnown RBP9.89□□□□□ -0.83
RIF1-205ENST00000444746 RUNDC1Q96C34 613 aa9.88□□□□□ -0.83
RIF1-205ENST00000444746 PPP2R1AP30153 589 aa9.88□□□□□ -0.83
RIF1-205ENST00000444746 NLRP6P59044 892 aa9.88□□□□□ -0.83
RIF1-205ENST00000444746 PRG4Q92954 1404 aaPredicted RBP9.88□□□□□ -0.83
RIF1-205ENST00000444746 APPP05067 770 aa9.88□□□□□ -0.83
RIF1-205ENST00000444746 TCP11L2Q8N4U5 519 aa9.88□□□□□ -0.83
RIF1-205ENST00000444746 NCOA2Q15596 1464 aa9.88□□□□□ -0.83
RIF1-205ENST00000444746 CHAF1AQ13111 956 aaPredicted RBP9.88□□□□□ -0.83
RIF1-205ENST00000444746 NEUROD6Q96NK8 337 aa9.88□□□□□ -0.83
RIF1-205ENST00000444746 H3BQV1 296 aa9.87□□□□□ -0.83
RIF1-205ENST00000444746 IFFO2Q5TF58 517 aa9.87□□□□□ -0.83
RIF1-205ENST00000444746 ESCO1Q5FWF5 840 aa9.87□□□□□ -0.83
RIF1-205ENST00000444746 KIF16BQ96L93 1317 aa9.87□□□□□ -0.83
RIF1-205ENST00000444746 AKNAQ7Z591 1439 aa9.87□□□□□ -0.83
RIF1-205ENST00000444746 PRKAR2BP31323 418 aa9.87□□□□□ -0.83
RIF1-205ENST00000444746 SF3A1Q15459 793 aaKnown RBP9.87□□□□□ -0.83
RIF1-205ENST00000444746 MIS18AQ9NYP9 233 aa9.87□□□□□ -0.83
RIF1-205ENST00000444746 LRRC9Q6ZRR7 1453 aa9.87□□□□□ -0.83
RIF1-205ENST00000444746 RRS1Q15050 365 aaKnown RBP9.87□□□□□ -0.83
RIF1-205ENST00000444746 MYOM3Q5VTT5 1437 aa9.87□□□□□ -0.83
RIF1-205ENST00000444746 SLC26A8Q96RN1 970 aa9.87□□□□□ -0.83
RIF1-205ENST00000444746 DIAPH3Q9NSV4 1193 aa9.86□□□□□ -0.83
RIF1-205ENST00000444746 ST18O60284 1047 aa9.86□□□□□ -0.83
RIF1-205ENST00000444746 MPNDQ8N594 471 aa9.86□□□□□ -0.83
RIF1-205ENST00000444746 STRN4Q9NRL3 753 aa9.86□□□□□ -0.83
RIF1-205ENST00000444746 IFIT2P09913 472 aaKnown RBP9.86□□□□□ -0.83
RIF1-205ENST00000444746 ANKRD50Q9ULJ7 1429 aa9.86□□□□□ -0.83
RIF1-205ENST00000444746 CABP1Q9NZU7 370 aa9.86□□□□□ -0.83
RIF1-205ENST00000444746 THUMPD2Q9BTF0 503 aaKnown RBP9.85□□□□□ -0.83
RIF1-205ENST00000444746 FAM184AQ8NB25 1140 aa9.85□□□□□ -0.83
RIF1-205ENST00000444746 CCDC27Q2M243 656 aa9.85□□□□□ -0.83
RIF1-205ENST00000444746 CNTLNQ9NXG0 1405 aa9.85□□□□□ -0.83
RIF1-205ENST00000444746 MARCH6O60337 910 aa9.85□□□□□ -0.83
RIF1-205ENST00000444746 KIAA2012Q0VF49 1180 aa9.85□□□□□ -0.83
RIF1-205ENST00000444746 NOB1Q9ULX3 412 aaKnown RBP9.85□□□□□ -0.83
RIF1-205ENST00000444746 VPS37CA5D8V6 355 aaPredicted RBP9.84□□□□□ -0.83
RIF1-205ENST00000444746 RIC3Q7Z5B4 369 aa9.84□□□□□ -0.83
RIF1-205ENST00000444746 NUTM2BA6NNL0 878 aaPredicted RBP9.84□□□□□ -0.83
RIF1-205ENST00000444746 NUTM2EB1AL46 878 aaPredicted RBP9.84□□□□□ -0.83
RIF1-205ENST00000444746 NUTM2AQ8IVF1 878 aaPredicted RBP9.84□□□□□ -0.83
RIF1-205ENST00000444746 RBM42Q9BTD8 480 aaKnown RBP9.84□□□□□ -0.83
RIF1-205ENST00000444746 PDZRN3Q9UPQ7 1066 aa9.84□□□□□ -0.83
RIF1-205ENST00000444746 PRDM2Q13029 1718 aa9.84□□□□□ -0.83
RIF1-205ENST00000444746 ABTB2Q8N961 1025 aa9.84□□□□□ -0.83
RIF1-205ENST00000444746 ZNF592Q92610 1267 aa9.84□□□□□ -0.83
RIF1-205ENST00000444746 NRDCO43847 1150 aa9.83□□□□□ -0.84
RIF1-205ENST00000444746 MEX3CQ5U5Q3 659 aaKnown RBP9.83□□□□□ -0.84
RIF1-205ENST00000444746 TMX4Q9H1E5 349 aaPredicted RBP9.83□□□□□ -0.84
RIF1-205ENST00000444746 DNAJC2Q99543 621 aaKnown RBP9.83□□□□□ -0.84
RIF1-205ENST00000444746 SIL1Q9H173 461 aa9.83□□□□□ -0.84
RIF1-205ENST00000444746 DDX19BQ9UMR2 479 aa9.83□□□□□ -0.84
RIF1-205ENST00000444746 CDK19Q9BWU1 502 aa9.83□□□□□ -0.84
RIF1-205ENST00000444746 SPINK5Q9NQ38 1064 aaPredicted RBP9.82□□□□□ -0.84
RIF1-205ENST00000444746 DCTN1Q14203 1278 aa9.82□□□□□ -0.84
RIF1-205ENST00000444746 CCDC85AQ96PX6 553 aaPredicted RBP9.82□□□□□ -0.84
RIF1-205ENST00000444746 UACAQ9BZF9 1416 aa9.82□□□□□ -0.84
RIF1-205ENST00000444746 FBLN1P23142 703 aa9.82□□□□□ -0.84
RIF1-205ENST00000444746 GSE1Q14687 1217 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms