RNA–Protein interactions for RNA: ENST00000444658.7

CCNDBP1-202, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-202ENST00000444658 PIK3C2BO00750 1634 aa12.94□□□□□ -0.34
CCNDBP1-202ENST00000444658 FBXO31Q5XUX0 539 aaPredicted RBP12.94□□□□□ -0.34
CCNDBP1-202ENST00000444658 MLECQ14165 292 aa12.93□□□□□ -0.34
CCNDBP1-202ENST00000444658 NBPF1Q3BBV0 1214 aa12.93□□□□□ -0.34
CCNDBP1-202ENST00000444658 SPATA31D1Q6ZQQ2 1576 aa12.92□□□□□ -0.34
CCNDBP1-202ENST00000444658 C14orf93Q9H972 538 aaKnown RBP12.92□□□□□ -0.34
CCNDBP1-202ENST00000444658 SYNMO15061 1565 aa12.92□□□□□ -0.34
CCNDBP1-202ENST00000444658 HDGFP51858 240 aaKnown RBP12.91□□□□□ -0.34
CCNDBP1-202ENST00000444658 HIRIP3Q9BW71 556 aaPredicted RBP12.91□□□□□ -0.34
CCNDBP1-202ENST00000444658 WASHC2AQ641Q2 1341 aa12.91□□□□□ -0.34
CCNDBP1-202ENST00000444658 LAMC1P11047 1609 aa12.91□□□□□ -0.34
CCNDBP1-202ENST00000444658 CHGAP10645 457 aaKnown RBP12.91□□□□□ -0.34
CCNDBP1-202ENST00000444658 UGGT1Q9NYU2 1555 aa12.9□□□□□ -0.34
CCNDBP1-202ENST00000444658 ADGRF5Q8IZF2 1346 aa12.9□□□□□ -0.34
CCNDBP1-202ENST00000444658 SIGLEC1Q9BZZ2 1709 aa12.9□□□□□ -0.34
CCNDBP1-202ENST00000444658 ST20-MTHFSA0A0A6YYL1 179 aa12.9□□□□□ -0.34
CCNDBP1-202ENST00000444658 DDX10Q13206 875 aaKnown RBP12.9□□□□□ -0.34
CCNDBP1-202ENST00000444658 KIF1BO60333 1816 aa12.89□□□□□ -0.35
CCNDBP1-202ENST00000444658 TRPM1Q7Z4N2 1603 aa12.89□□□□□ -0.35
CCNDBP1-202ENST00000444658 PREX1Q8TCU6 1659 aa12.88□□□□□ -0.35
CCNDBP1-202ENST00000444658 CCDC7Q96M83 1385 aa12.88□□□□□ -0.35
CCNDBP1-202ENST00000444658 C11orf95C9JLR9 678 aaPredicted RBP12.88□□□□□ -0.35
CCNDBP1-202ENST00000444658 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCNDBP1-202ENST00000444658 PIK3C2GO75747 1445 aa12.87□□□□□ -0.35
CCNDBP1-202ENST00000444658 KIAA1210Q9ULL0 1709 aa12.87□□□□□ -0.35
CCNDBP1-202ENST00000444658 MADDQ8WXG6 1647 aa12.87□□□□□ -0.35
CCNDBP1-202ENST00000444658 TNRQ92752 1358 aa12.86□□□□□ -0.35
CCNDBP1-202ENST00000444658 CFAP70Q5T0N1 1121 aa12.86□□□□□ -0.35
CCNDBP1-202ENST00000444658 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
CCNDBP1-202ENST00000444658 KIF7Q2M1P5 1343 aa12.86□□□□□ -0.35
CCNDBP1-202ENST00000444658 SCAF11Q99590 1463 aaKnown RBP12.86□□□□□ -0.35
CCNDBP1-202ENST00000444658 CLTCQ00610 1675 aaKnown RBP12.86□□□□□ -0.35
CCNDBP1-202ENST00000444658 MIER1Q8N108 512 aa12.85□□□□□ -0.35
CCNDBP1-202ENST00000444658 TESK2Q96S53 571 aa12.85□□□□□ -0.35
CCNDBP1-202ENST00000444658 MROH2AA6NES4 1674 aa12.85□□□□□ -0.35
CCNDBP1-202ENST00000444658 TMEM131LA2VDJ0 1609 aa12.85□□□□□ -0.35
CCNDBP1-202ENST00000444658 A2ML1A8K2U0 1454 aa12.84□□□□□ -0.35
CCNDBP1-202ENST00000444658 EIF3AQ14152 1382 aaKnown RBP12.84□□□□□ -0.35
CCNDBP1-202ENST00000444658 NLRP1Q9C000 1473 aa12.84□□□□□ -0.35
CCNDBP1-202ENST00000444658 CDCA8Q53HL2 280 aa12.84□□□□□ -0.35
CCNDBP1-202ENST00000444658 SETBP1Q9Y6X0 1596 aa12.83□□□□□ -0.35
CCNDBP1-202ENST00000444658 NEXMIFQ5QGS0 1516 aa12.83□□□□□ -0.36
CCNDBP1-202ENST00000444658 TMF1P82094 1093 aa12.83□□□□□ -0.36
CCNDBP1-202ENST00000444658 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
CCNDBP1-202ENST00000444658 IFT172Q9UG01 1749 aa12.82□□□□□ -0.36
CCNDBP1-202ENST00000444658 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
CCNDBP1-202ENST00000444658 PUS7Q96PZ0 661 aaKnown RBP12.81□□□□□ -0.36
CCNDBP1-202ENST00000444658 SBNO2Q9Y2G9 1366 aa12.81□□□□□ -0.36
CCNDBP1-202ENST00000444658 KDM5AP29375 1690 aaKnown RBP12.8□□□□□ -0.36
CCNDBP1-202ENST00000444658 ANP32CO43423 234 aa12.8□□□□□ -0.36
CCNDBP1-202ENST00000444658 PPLO60437 1756 aa12.8□□□□□ -0.36
CCNDBP1-202ENST00000444658 CCER2I3L3R5 266 aa12.79□□□□□ -0.36
CCNDBP1-202ENST00000444658 THEMISQ8N1K5 641 aaPredicted RBP12.79□□□□□ -0.36
CCNDBP1-202ENST00000444658 RIMS2Q9UQ26 1411 aa12.78□□□□□ -0.36
CCNDBP1-202ENST00000444658 CFAP65Q6ZU64 1925 aaKnown RBP12.78□□□□□ -0.36
CCNDBP1-202ENST00000444658 TMEM2Q9UHN6 1383 aa12.78□□□□□ -0.36
CCNDBP1-202ENST00000444658 CENPBP07199 599 aaPredicted RBP12.78□□□□□ -0.36
CCNDBP1-202ENST00000444658 CEBPAP49715 358 aaPredicted RBP12.78□□□□□ -0.36
CCNDBP1-202ENST00000444658 SIRT1Q96EB6 747 aa12.78□□□□□ -0.36
CCNDBP1-202ENST00000444658 ADGRB1O14514 1584 aa12.77□□□□□ -0.37
CCNDBP1-202ENST00000444658 CENPJQ9HC77 1338 aaPredicted RBP12.74□□□□□ -0.37
CCNDBP1-202ENST00000444658 EID1Q9Y6B2 187 aa12.74□□□□□ -0.37
CCNDBP1-202ENST00000444658 IQGAP1P46940 1657 aa12.74□□□□□ -0.37
CCNDBP1-202ENST00000444658 NUTM2DQ5VT03 806 aaPredicted RBP12.73□□□□□ -0.37
CCNDBP1-202ENST00000444658 TMEM132EQ6IEE7 984 aa12.73□□□□□ -0.37
CCNDBP1-202ENST00000444658 KTN1Q86UP2 1357 aaKnown RBP12.73□□□□□ -0.37
CCNDBP1-202ENST00000444658 ABCC11Q96J66 1382 aa12.73□□□□□ -0.37
CCNDBP1-202ENST00000444658 POLR1AO95602 1720 aaPredicted RBP12.73□□□□□ -0.37
CCNDBP1-202ENST00000444658 ARHGAP23Q9P227 1491 aa12.72□□□□□ -0.37
CCNDBP1-202ENST00000444658 TRAK1Q9UPV9 953 aa12.72□□□□□ -0.37
CCNDBP1-202ENST00000444658 ADAMTSL3P82987 1691 aa12.72□□□□□ -0.37
CCNDBP1-202ENST00000444658 PER1O15534 1290 aaPredicted RBP12.72□□□□□ -0.37
CCNDBP1-202ENST00000444658 PRKRIP1Q9H875 184 aaPredicted RBP12.72□□□□□ -0.37
CCNDBP1-202ENST00000444658 DISP3Q9P2K9 1392 aa12.71□□□□□ -0.37
CCNDBP1-202ENST00000444658 PLEKHG1Q9ULL1 1385 aa12.71□□□□□ -0.37
CCNDBP1-202ENST00000444658 SLIT1O75093 1534 aa12.71□□□□□ -0.37
CCNDBP1-202ENST00000444658 TXNDC2Q86VQ3 553 aa12.71□□□□□ -0.38
CCNDBP1-202ENST00000444658 TBX22Q9Y458 520 aa12.71□□□□□ -0.38
CCNDBP1-202ENST00000444658 C3P01024 1663 aa12.71□□□□□ -0.38
CCNDBP1-202ENST00000444658 ALKQ9UM73 1620 aa12.7□□□□□ -0.38
CCNDBP1-202ENST00000444658 YTHDC2Q9H6S0 1430 aaKnown RBP12.7□□□□□ -0.38
CCNDBP1-202ENST00000444658 LRPPRCP42704 1394 aaKnown RBP12.7□□□□□ -0.38
CCNDBP1-202ENST00000444658 FER1L4A9Z1Z3 1794 aa12.69□□□□□ -0.38
CCNDBP1-202ENST00000444658 MYO3AQ8NEV4 1616 aa12.69□□□□□ -0.38
CCNDBP1-202ENST00000444658 LTKP29376 864 aa12.69□□□□□ -0.38
CCNDBP1-202ENST00000444658 C1QBPQ07021 282 aaKnown RBP12.69□□□□□ -0.38
CCNDBP1-202ENST00000444658 U3KPZ7 1027 aaPredicted RBP12.69□□□□□ -0.38
CCNDBP1-202ENST00000444658 RALBP1Q15311 655 aa12.68□□□□□ -0.38
CCNDBP1-202ENST00000444658 EVC2Q86UK5 1308 aa12.68□□□□□ -0.38
CCNDBP1-202ENST00000444658 UBR1Q8IWV7 1749 aa12.68□□□□□ -0.38
CCNDBP1-202ENST00000444658 MED14O60244 1454 aa12.67□□□□□ -0.38
CCNDBP1-202ENST00000444658 DLC1Q96QB1 1528 aa12.67□□□□□ -0.38
CCNDBP1-202ENST00000444658 POLR3GLQ9BT43 218 aa12.66□□□□□ -0.38
CCNDBP1-202ENST00000444658 PANK3Q9H999 370 aa12.66□□□□□ -0.38
CCNDBP1-202ENST00000444658 FOXD4L1Q9NU39 408 aa12.66□□□□□ -0.38
CCNDBP1-202ENST00000444658 TECPR2O15040 1411 aa12.66□□□□□ -0.38
CCNDBP1-202ENST00000444658 FAM135BQ49AJ0 1406 aa12.66□□□□□ -0.38
CCNDBP1-202ENST00000444658 PTPRMP28827 1452 aa12.65□□□□□ -0.38
CCNDBP1-202ENST00000444658 NPC1L1Q9UHC9 1359 aa12.65□□□□□ -0.38
CCNDBP1-202ENST00000444658 ANKLE2Q86XL3 938 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms