RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 RRBP1Q9P2E9 1410 aaKnown RBP16.72■□□□□ 0.27
HLA-F-221ENST00000444621 JCADQ9P266 1359 aa16.72■□□□□ 0.27
HLA-F-221ENST00000444621 EFCAB6Q5THR3 1501 aa16.71■□□□□ 0.27
HLA-F-221ENST00000444621 LMTK2Q8IWU2 1503 aa16.7■□□□□ 0.26
HLA-F-221ENST00000444621 NWD1Q149M9 1564 aa16.7■□□□□ 0.26
HLA-F-221ENST00000444621 NKTRP30414 1462 aaKnown RBP16.69■□□□□ 0.26
HLA-F-221ENST00000444621 MSH6P52701 1360 aa16.69■□□□□ 0.26
HLA-F-221ENST00000444621 UPF1Q92900 1129 aaKnown RBP eCLIP16.69■□□□□ 0.26
HLA-F-221ENST00000444621 SLAIN2Q9P270 581 aa16.69■□□□□ 0.26
HLA-F-221ENST00000444621 IDI1Q13907 227 aa16.68■□□□□ 0.26
HLA-F-221ENST00000444621 COL16A1Q07092 1604 aaPredicted RBP16.67■□□□□ 0.26
HLA-F-221ENST00000444621 SLC52A1Q9NWF4 448 aa16.67■□□□□ 0.26
HLA-F-221ENST00000444621 NUP155O75694 1391 aa16.66■□□□□ 0.26
HLA-F-221ENST00000444621 TRIM52Q96A61 297 aa16.66■□□□□ 0.26
HLA-F-221ENST00000444621 LRP6O75581 1613 aa16.66■□□□□ 0.26
HLA-F-221ENST00000444621 RPRD2Q5VT52 1461 aaKnown RBP16.66■□□□□ 0.26
HLA-F-221ENST00000444621 UNC13BO14795 1591 aa16.65■□□□□ 0.26
HLA-F-221ENST00000444621 CHD2O14647 1828 aaKnown RBP16.64■□□□□ 0.25
HLA-F-221ENST00000444621 MEX3CQ5U5Q3 659 aaKnown RBP16.64■□□□□ 0.25
HLA-F-221ENST00000444621 BCANQ96GW7 911 aa16.64■□□□□ 0.25
HLA-F-221ENST00000444621 GCC2Q8IWJ2 1684 aa16.64■□□□□ 0.25
HLA-F-221ENST00000444621 HDGFP51858 240 aaKnown RBP16.63■□□□□ 0.25
HLA-F-221ENST00000444621 ZNF772Q68DY9 489 aaPredicted RBP16.63■□□□□ 0.25
HLA-F-221ENST00000444621 ADGRB3O60242 1522 aa16.63■□□□□ 0.25
HLA-F-221ENST00000444621 SPATA31A6Q5VVP1 1343 aa16.62■□□□□ 0.25
HLA-F-221ENST00000444621 IQGAP3Q86VI3 1631 aa16.6■□□□□ 0.25
HLA-F-221ENST00000444621 SHPRHQ149N8 1683 aa16.6■□□□□ 0.25
HLA-F-221ENST00000444621 MYO5BQ9ULV0 1848 aa16.6■□□□□ 0.25
HLA-F-221ENST00000444621 NOS1P29475 1434 aa16.59■□□□□ 0.25
HLA-F-221ENST00000444621 CHGAP10645 457 aaKnown RBP16.58■□□□□ 0.24
HLA-F-221ENST00000444621 ACIN1Q9UKV3 1341 aaKnown RBP16.57■□□□□ 0.24
HLA-F-221ENST00000444621 RXRBP28702 533 aa16.57■□□□□ 0.24
HLA-F-221ENST00000444621 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.56■□□□□ 0.24
HLA-F-221ENST00000444621 AHDC1Q5TGY3 1603 aaPredicted RBP16.56■□□□□ 0.24
HLA-F-221ENST00000444621 NAIPQ13075 1403 aa16.56■□□□□ 0.24
HLA-F-221ENST00000444621 PLEKHG1Q9ULL1 1385 aa16.55■□□□□ 0.24
HLA-F-221ENST00000444621 C14orf37Q86TY3 774 aa16.55■□□□□ 0.24
HLA-F-221ENST00000444621 E9PCH4 1651 aa16.55■□□□□ 0.24
HLA-F-221ENST00000444621 HFM1A2PYH4 1435 aa16.54■□□□□ 0.24
HLA-F-221ENST00000444621 ZFYVE9O95405 1425 aa16.54■□□□□ 0.24
HLA-F-221ENST00000444621 PPP1R15AO75807 674 aaPredicted RBP16.54■□□□□ 0.24
HLA-F-221ENST00000444621 CDK12Q9NYV4 1490 aaPredicted RBP16.54■□□□□ 0.24
HLA-F-221ENST00000444621 NCOA3Q9Y6Q9 1424 aa16.53■□□□□ 0.24
HLA-F-221ENST00000444621 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.53■□□□□ 0.24
HLA-F-221ENST00000444621 NUTM2BA6NNL0 878 aaPredicted RBP16.52■□□□□ 0.24
HLA-F-221ENST00000444621 NUTM2EB1AL46 878 aaPredicted RBP16.52■□□□□ 0.24
HLA-F-221ENST00000444621 NUTM2AQ8IVF1 878 aaPredicted RBP16.52■□□□□ 0.24
HLA-F-221ENST00000444621 RIMS2Q9UQ26 1411 aa16.52■□□□□ 0.23
HLA-F-221ENST00000444621 DIP2AQ14689 1571 aa16.51■□□□□ 0.23
HLA-F-221ENST00000444621 ATF3P18847 181 aa16.51■□□□□ 0.23
HLA-F-221ENST00000444621 CADPS2Q86UW7 1296 aa16.51■□□□□ 0.23
HLA-F-221ENST00000444621 TBX22Q9Y458 520 aa16.51■□□□□ 0.23
HLA-F-221ENST00000444621 TMEM131LA2VDJ0 1609 aa16.5■□□□□ 0.23
HLA-F-221ENST00000444621 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
HLA-F-221ENST00000444621 C19orf44Q9H6X5 657 aa16.5■□□□□ 0.23
HLA-F-221ENST00000444621 AFF2P51816 1311 aa16.49■□□□□ 0.23
HLA-F-221ENST00000444621 ZNF326Q5BKZ1 582 aaKnown RBP16.47■□□□□ 0.23
HLA-F-221ENST00000444621 BRINP3Q76B58 766 aa16.47■□□□□ 0.23
HLA-F-221ENST00000444621 SPHKAPQ2M3C7 1700 aa16.47■□□□□ 0.23
HLA-F-221ENST00000444621 SRCAPQ6ZRS2 3230 aa16.46■□□□□ 0.23
HLA-F-221ENST00000444621 ADAMTS13Q76LX8 1427 aa16.45■□□□□ 0.22
HLA-F-221ENST00000444621 NUTM2DQ5VT03 806 aaPredicted RBP16.45■□□□□ 0.22
HLA-F-221ENST00000444621 RGS12O14924 1447 aa16.45■□□□□ 0.22
HLA-F-221ENST00000444621 NHSL1Q5SYE7 1610 aa16.43■□□□□ 0.22
HLA-F-221ENST00000444621 ASXL1Q8IXJ9 1541 aa16.43■□□□□ 0.22
HLA-F-221ENST00000444621 PIK3R4Q99570 1358 aa16.42■□□□□ 0.22
HLA-F-221ENST00000444621 RBM6P78332 1123 aaKnown RBP16.42■□□□□ 0.22
HLA-F-221ENST00000444621 QTRT2Q9H974 415 aaKnown RBP16.42■□□□□ 0.22
HLA-F-221ENST00000444621 SETD5Q9C0A6 1442 aa16.42■□□□□ 0.22
HLA-F-221ENST00000444621 C8orf37Q96NL8 207 aa16.41■□□□□ 0.22
HLA-F-221ENST00000444621 KIF1BO60333 1816 aa16.4■□□□□ 0.22
HLA-F-221ENST00000444621 TRPM2O94759 1503 aa16.4■□□□□ 0.22
HLA-F-221ENST00000444621 PTPRUQ92729 1446 aa16.4■□□□□ 0.22
HLA-F-221ENST00000444621 AMOTL2Q9Y2J4 779 aa16.4■□□□□ 0.22
HLA-F-221ENST00000444621 MPHOSPH9Q99550 1183 aa16.39■□□□□ 0.21
HLA-F-221ENST00000444621 DCCP43146 1447 aa16.38■□□□□ 0.21
HLA-F-221ENST00000444621 LRRC59Q96AG4 307 aaKnown RBP16.38■□□□□ 0.21
HLA-F-221ENST00000444621 MST1RQ04912 1400 aa16.37■□□□□ 0.21
HLA-F-221ENST00000444621 DDX17Q92841 729 aaKnown RBP16.36■□□□□ 0.21
HLA-F-221ENST00000444621 PNPLA6Q8IY17 1366 aa16.36■□□□□ 0.21
HLA-F-221ENST00000444621 XRN1Q8IZH2 1706 aaKnown RBP16.36■□□□□ 0.21
HLA-F-221ENST00000444621 VGFO15240 615 aaPredicted RBP16.35■□□□□ 0.21
HLA-F-221ENST00000444621 ATAD2Q6PL18 1390 aa16.35■□□□□ 0.21
HLA-F-221ENST00000444621 CLTCL1P53675 1640 aa16.34■□□□□ 0.21
HLA-F-221ENST00000444621 NGLY1Q96IV0 654 aa16.34■□□□□ 0.21
HLA-F-221ENST00000444621 RPGRIP1LQ68CZ1 1315 aa16.34■□□□□ 0.21
HLA-F-221ENST00000444621 ADAMTS2O95450 1211 aa16.33■□□□□ 0.2
HLA-F-221ENST00000444621 CCDC144AA2RUR9 1427 aa16.33■□□□□ 0.2
HLA-F-221ENST00000444621 NRXN3Q9Y4C0 1643 aa16.33■□□□□ 0.2
HLA-F-221ENST00000444621 FOXD1Q16676 465 aa16.32■□□□□ 0.2
HLA-F-221ENST00000444621 RAB3GAP2Q9H2M9 1393 aa16.32■□□□□ 0.2
HLA-F-221ENST00000444621 ZRANB1Q9UGI0 708 aa16.32■□□□□ 0.2
HLA-F-221ENST00000444621 HRCP23327 699 aa16.31■□□□□ 0.2
HLA-F-221ENST00000444621 SETBP1Q9Y6X0 1596 aa16.3■□□□□ 0.2
HLA-F-221ENST00000444621 NALCNQ8IZF0 1738 aa16.3■□□□□ 0.2
HLA-F-221ENST00000444621 USP21Q9UK80 565 aa16.29■□□□□ 0.2
HLA-F-221ENST00000444621 EP400Q96L91 3159 aa16.28■□□□□ 0.2
HLA-F-221ENST00000444621 ADGRL3Q9HAR2 1447 aa16.28■□□□□ 0.2
HLA-F-221ENST00000444621 RGL3Q3MIN7 710 aa16.27■□□□□ 0.2
HLA-F-221ENST00000444621 TRPC5Q9UL62 973 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms