RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
HDAC8-215ENST00000444609 C19orf44Q9H6X5 657 aa16.86■□□□□ 0.29
HDAC8-215ENST00000444609 ATF3P18847 181 aa16.85■□□□□ 0.29
HDAC8-215ENST00000444609 YY1P25490 414 aa16.85■□□□□ 0.29
HDAC8-215ENST00000444609 C14orf37Q86TY3 774 aa16.85■□□□□ 0.29
HDAC8-215ENST00000444609 LRRC59Q96AG4 307 aaKnown RBP16.85■□□□□ 0.29
HDAC8-215ENST00000444609 TRPC5Q9UL62 973 aaPredicted RBP16.85■□□□□ 0.29
HDAC8-215ENST00000444609 CCDC141Q6ZP82 1450 aa16.83■□□□□ 0.28
HDAC8-215ENST00000444609 EP400Q96L91 3159 aa16.83■□□□□ 0.28
HDAC8-215ENST00000444609 USP21Q9UK80 565 aa16.83■□□□□ 0.28
HDAC8-215ENST00000444609 BCANQ96GW7 911 aa16.82■□□□□ 0.28
HDAC8-215ENST00000444609 ADAMTS2O95450 1211 aa16.81■□□□□ 0.28
HDAC8-215ENST00000444609 ARHGAP31Q2M1Z3 1444 aa16.8■□□□□ 0.28
HDAC8-215ENST00000444609 DEFB132Q7Z7B7 95 aa16.8■□□□□ 0.28
HDAC8-215ENST00000444609 MAST1Q9Y2H9 1570 aa16.8■□□□□ 0.28
HDAC8-215ENST00000444609 HRCP23327 699 aa16.79■□□□□ 0.28
HDAC8-215ENST00000444609 IDI1Q13907 227 aa16.79■□□□□ 0.28
HDAC8-215ENST00000444609 BLMP54132 1417 aaPredicted RBP16.79■□□□□ 0.28
HDAC8-215ENST00000444609 PNPLA6Q8IY17 1366 aa16.78■□□□□ 0.28
HDAC8-215ENST00000444609 TSPY4P0CV99 314 aa16.78■□□□□ 0.28
HDAC8-215ENST00000444609 TSPY10P0CW01 314 aa16.78■□□□□ 0.28
HDAC8-215ENST00000444609 FNBP4Q8N3X1 1017 aaPredicted RBP16.78■□□□□ 0.28
HDAC8-215ENST00000444609 EFCAB6Q5THR3 1501 aa16.78■□□□□ 0.28
HDAC8-215ENST00000444609 FYCO1Q9BQS8 1478 aa16.78■□□□□ 0.28
HDAC8-215ENST00000444609 PIK3C2BO00750 1634 aa16.78■□□□□ 0.28
HDAC8-215ENST00000444609 MTUS2Q5JR59 1369 aa16.76■□□□□ 0.27
HDAC8-215ENST00000444609 PSDA5PKW4 1024 aaPredicted RBP16.75■□□□□ 0.27
HDAC8-215ENST00000444609 ATRNO75882 1429 aa16.75■□□□□ 0.27
HDAC8-215ENST00000444609 NHSL1Q5SYE7 1610 aa16.74■□□□□ 0.27
HDAC8-215ENST00000444609 MROH1Q8NDA8 1641 aa16.74■□□□□ 0.27
HDAC8-215ENST00000444609 TBX22Q9Y458 520 aa16.74■□□□□ 0.27
HDAC8-215ENST00000444609 CFAP65Q6ZU64 1925 aaKnown RBP16.73■□□□□ 0.27
HDAC8-215ENST00000444609 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.73■□□□□ 0.27
HDAC8-215ENST00000444609 ASXL1Q8IXJ9 1541 aa16.72■□□□□ 0.27
HDAC8-215ENST00000444609 PLEKHG1Q9ULL1 1385 aa16.7■□□□□ 0.26
HDAC8-215ENST00000444609 SF3B2Q13435 895 aaKnown RBP16.7■□□□□ 0.26
HDAC8-215ENST00000444609 DDX17Q92841 729 aaKnown RBP16.7■□□□□ 0.26
HDAC8-215ENST00000444609 CHD2O14647 1828 aaKnown RBP16.7■□□□□ 0.26
HDAC8-215ENST00000444609 BCL9LQ86UU0 1499 aa16.69■□□□□ 0.26
HDAC8-215ENST00000444609 GJD4Q96KN9 370 aaPredicted RBP16.68■□□□□ 0.26
HDAC8-215ENST00000444609 CEP152O94986 1710 aa16.67■□□□□ 0.26
HDAC8-215ENST00000444609 EIF2AK4Q9P2K8 1649 aaKnown RBP16.67■□□□□ 0.26
HDAC8-215ENST00000444609 DCCP43146 1447 aa16.65■□□□□ 0.26
HDAC8-215ENST00000444609 PTCH1Q13635 1447 aa16.65■□□□□ 0.26
HDAC8-215ENST00000444609 PPP1R15AO75807 674 aaPredicted RBP16.65■□□□□ 0.26
HDAC8-215ENST00000444609 MST1RQ04912 1400 aa16.64■□□□□ 0.25
HDAC8-215ENST00000444609 HDGFP51858 240 aaKnown RBP16.64■□□□□ 0.25
HDAC8-215ENST00000444609 ZFYVE9O95405 1425 aa16.63■□□□□ 0.25
HDAC8-215ENST00000444609 CEP162Q5TB80 1403 aa16.63■□□□□ 0.25
HDAC8-215ENST00000444609 SENP3-EIF4A1A0A087X0R7 540 aa16.63■□□□□ 0.25
HDAC8-215ENST00000444609 ARHGEF5Q12774 1597 aa16.63■□□□□ 0.25
HDAC8-215ENST00000444609 PIK3R4Q99570 1358 aa16.63■□□□□ 0.25
HDAC8-215ENST00000444609 SLC52A1Q9NWF4 448 aa16.62■□□□□ 0.25
HDAC8-215ENST00000444609 AMOTL2Q9Y2J4 779 aa16.61■□□□□ 0.25
HDAC8-215ENST00000444609 ADGRB3O60242 1522 aa16.6■□□□□ 0.25
HDAC8-215ENST00000444609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.25
HDAC8-215ENST00000444609 ADAMTS13Q76LX8 1427 aa16.59■□□□□ 0.25
HDAC8-215ENST00000444609 R3HDM1Q15032 1099 aaKnown RBP16.58■□□□□ 0.24
HDAC8-215ENST00000444609 NOS1P29475 1434 aa16.58■□□□□ 0.24
HDAC8-215ENST00000444609 RIMS2Q9UQ26 1411 aa16.58■□□□□ 0.24
HDAC8-215ENST00000444609 BAG6P46379 1132 aa16.57■□□□□ 0.24
HDAC8-215ENST00000444609 SOS2Q07890 1332 aaPredicted RBP16.56■□□□□ 0.24
HDAC8-215ENST00000444609 UNC13BO14795 1591 aa16.55■□□□□ 0.24
HDAC8-215ENST00000444609 EHBP1L1Q8N3D4 1523 aa16.55■□□□□ 0.24
HDAC8-215ENST00000444609 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.55■□□□□ 0.24
HDAC8-215ENST00000444609 DUOX2Q9NRD8 1548 aa16.55■□□□□ 0.24
HDAC8-215ENST00000444609 PTPRUQ92729 1446 aa16.53■□□□□ 0.24
HDAC8-215ENST00000444609 KANK1Q14678 1352 aa16.53■□□□□ 0.24
HDAC8-215ENST00000444609 SEPT12Q8IYM1 358 aa16.53■□□□□ 0.24
HDAC8-215ENST00000444609 RALGAPBQ86X10 1494 aa16.52■□□□□ 0.23
HDAC8-215ENST00000444609 DCAF8L1A6NGE4 600 aa16.51■□□□□ 0.23
HDAC8-215ENST00000444609 C1QTNF8P60827 252 aa16.51■□□□□ 0.23
HDAC8-215ENST00000444609 UNC5CLQ8IV45 518 aa16.51■□□□□ 0.23
HDAC8-215ENST00000444609 ZNF784Q8NCA9 323 aaPredicted RBP16.51■□□□□ 0.23
HDAC8-215ENST00000444609 LMTK2Q8IWU2 1503 aa16.5■□□□□ 0.23
HDAC8-215ENST00000444609 EN1Q05925 392 aaPredicted RBP16.49■□□□□ 0.23
HDAC8-215ENST00000444609 KRT27Q7Z3Y8 459 aa16.49■□□□□ 0.23
HDAC8-215ENST00000444609 MYOM2P54296 1465 aa16.48■□□□□ 0.23
HDAC8-215ENST00000444609 GLI3P10071 1580 aa16.48■□□□□ 0.23
HDAC8-215ENST00000444609 ERBINQ96RT1 1412 aa16.48■□□□□ 0.23
HDAC8-215ENST00000444609 ONECUT3O60422 494 aaPredicted RBP16.48■□□□□ 0.23
HDAC8-215ENST00000444609 TRPM2O94759 1503 aa16.48■□□□□ 0.23
HDAC8-215ENST00000444609 KIF15Q9NS87 1388 aa16.47■□□□□ 0.23
HDAC8-215ENST00000444609 SPHKAPQ2M3C7 1700 aa16.46■□□□□ 0.23
HDAC8-215ENST00000444609 ORAI2Q96SN7 254 aa16.46■□□□□ 0.23
HDAC8-215ENST00000444609 RRP7BPQ9NSQ0 103 aa16.46■□□□□ 0.23
HDAC8-215ENST00000444609 C1orf167Q5SNV9 1468 aa16.46■□□□□ 0.23
HDAC8-215ENST00000444609 LAMC1P11047 1609 aa16.45■□□□□ 0.22
HDAC8-215ENST00000444609 COL22A1Q8NFW1 1626 aaPredicted RBP16.44■□□□□ 0.22
HDAC8-215ENST00000444609 ADGRL3Q9HAR2 1447 aa16.44■□□□□ 0.22
HDAC8-215ENST00000444609 SLIT2O94813 1529 aa16.42■□□□□ 0.22
HDAC8-215ENST00000444609 BRWD3Q6RI45 1802 aa16.4■□□□□ 0.22
HDAC8-215ENST00000444609 CHGAP10645 457 aaKnown RBP16.4■□□□□ 0.22
HDAC8-215ENST00000444609 TMEM131LA2VDJ0 1609 aa16.4■□□□□ 0.22
HDAC8-215ENST00000444609 VPS72Q15906 364 aa16.39■□□□□ 0.21
HDAC8-215ENST00000444609 RPRD2Q5VT52 1461 aaKnown RBP16.39■□□□□ 0.21
HDAC8-215ENST00000444609 EZH2Q15910 746 aaKnown RBP16.38■□□□□ 0.21
HDAC8-215ENST00000444609 NINLQ9Y2I6 1382 aa16.38■□□□□ 0.21
HDAC8-215ENST00000444609 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.37■□□□□ 0.21
HDAC8-215ENST00000444609 PPP1R1BQ9UD71 204 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms