RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
SMPD4P1-203ENST00000443839 RPGRIP1LQ68CZ1 1315 aa13.36□□□□□ -0.27
SMPD4P1-203ENST00000443839 PPLO60437 1756 aa13.35□□□□□ -0.27
SMPD4P1-203ENST00000443839 TMEM131LA2VDJ0 1609 aa13.35□□□□□ -0.27
SMPD4P1-203ENST00000443839 NBPF1Q3BBV0 1214 aa13.34□□□□□ -0.27
SMPD4P1-203ENST00000443839 ADGRF5Q8IZF2 1346 aa13.34□□□□□ -0.27
SMPD4P1-203ENST00000443839 GPRASP1Q5JY77 1395 aa13.34□□□□□ -0.27
SMPD4P1-203ENST00000443839 MYO5BQ9ULV0 1848 aa13.33□□□□□ -0.27
SMPD4P1-203ENST00000443839 TNRQ92752 1358 aa13.33□□□□□ -0.28
SMPD4P1-203ENST00000443839 LAMC1P11047 1609 aa13.32□□□□□ -0.28
SMPD4P1-203ENST00000443839 VGFO15240 615 aaPredicted RBP13.31□□□□□ -0.28
SMPD4P1-203ENST00000443839 CEBPAP49715 358 aaPredicted RBP13.31□□□□□ -0.28
SMPD4P1-203ENST00000443839 NRXN1Q9ULB1 1477 aa13.31□□□□□ -0.28
SMPD4P1-203ENST00000443839 NEXMIFQ5QGS0 1516 aa13.31□□□□□ -0.28
SMPD4P1-203ENST00000443839 C3P01024 1663 aa13.31□□□□□ -0.28
SMPD4P1-203ENST00000443839 KIAA1210Q9ULL0 1709 aa13.3□□□□□ -0.28
SMPD4P1-203ENST00000443839 NUTM2DQ5VT03 806 aaPredicted RBP13.3□□□□□ -0.28
SMPD4P1-203ENST00000443839 PIK3C2GO75747 1445 aa13.29□□□□□ -0.28
SMPD4P1-203ENST00000443839 DDX10Q13206 875 aaKnown RBP13.29□□□□□ -0.28
SMPD4P1-203ENST00000443839 CFAP70Q5T0N1 1121 aa13.29□□□□□ -0.28
SMPD4P1-203ENST00000443839 A2ML1A8K2U0 1454 aa13.29□□□□□ -0.28
SMPD4P1-203ENST00000443839 ST20-MTHFSA0A0A6YYL1 179 aa13.28□□□□□ -0.28
SMPD4P1-203ENST00000443839 WASHC2AQ641Q2 1341 aa13.27□□□□□ -0.28
SMPD4P1-203ENST00000443839 RIMS1Q86UR5 1692 aaKnown RBP13.27□□□□□ -0.28
SMPD4P1-203ENST00000443839 ZFYVE9O95405 1425 aa13.27□□□□□ -0.29
SMPD4P1-203ENST00000443839 NLRP1Q9C000 1473 aa13.27□□□□□ -0.29
SMPD4P1-203ENST00000443839 C14orf93Q9H972 538 aaKnown RBP13.25□□□□□ -0.29
SMPD4P1-203ENST00000443839 ADAMTSL3P82987 1691 aa13.25□□□□□ -0.29
SMPD4P1-203ENST00000443839 CCDC7Q96M83 1385 aa13.25□□□□□ -0.29
SMPD4P1-203ENST00000443839 SCAF11Q99590 1463 aaKnown RBP13.25□□□□□ -0.29
SMPD4P1-203ENST00000443839 C11orf95C9JLR9 678 aaPredicted RBP13.25□□□□□ -0.29
SMPD4P1-203ENST00000443839 POLR1AO95602 1720 aaPredicted RBP13.25□□□□□ -0.29
SMPD4P1-203ENST00000443839 KDM5AP29375 1690 aaKnown RBP13.24□□□□□ -0.29
SMPD4P1-203ENST00000443839 IQGAP1P46940 1657 aa13.24□□□□□ -0.29
SMPD4P1-203ENST00000443839 RIMS2Q9UQ26 1411 aa13.24□□□□□ -0.29
SMPD4P1-203ENST00000443839 EIF3AQ14152 1382 aaKnown RBP13.24□□□□□ -0.29
SMPD4P1-203ENST00000443839 KIF7Q2M1P5 1343 aa13.24□□□□□ -0.29
SMPD4P1-203ENST00000443839 SETBP1Q9Y6X0 1596 aa13.24□□□□□ -0.29
SMPD4P1-203ENST00000443839 UBR1Q8IWV7 1749 aa13.23□□□□□ -0.29
SMPD4P1-203ENST00000443839 POLR3GLQ9BT43 218 aa13.22□□□□□ -0.29
SMPD4P1-203ENST00000443839 HDGFP51858 240 aaKnown RBP13.22□□□□□ -0.29
SMPD4P1-203ENST00000443839 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMPD4P1-203ENST00000443839 TMEM2Q9UHN6 1383 aa13.21□□□□□ -0.3
SMPD4P1-203ENST00000443839 ADGRB1O14514 1584 aa13.21□□□□□ -0.3
SMPD4P1-203ENST00000443839 TMEM132EQ6IEE7 984 aa13.21□□□□□ -0.3
SMPD4P1-203ENST00000443839 MIER1Q8N108 512 aa13.21□□□□□ -0.3
SMPD4P1-203ENST00000443839 MYO3AQ8NEV4 1616 aa13.21□□□□□ -0.3
SMPD4P1-203ENST00000443839 TESK2Q96S53 571 aa13.2□□□□□ -0.3
SMPD4P1-203ENST00000443839 TMF1P82094 1093 aa13.18□□□□□ -0.3
SMPD4P1-203ENST00000443839 TRAK1Q9UPV9 953 aa13.18□□□□□ -0.3
SMPD4P1-203ENST00000443839 ALKQ9UM73 1620 aa13.17□□□□□ -0.3
SMPD4P1-203ENST00000443839 THEMISQ8N1K5 641 aaPredicted RBP13.17□□□□□ -0.3
SMPD4P1-203ENST00000443839 BCANQ96GW7 911 aa13.16□□□□□ -0.3
SMPD4P1-203ENST00000443839 CEP170BQ9Y4F5 1589 aaPredicted RBP13.16□□□□□ -0.3
SMPD4P1-203ENST00000443839 DISP3Q9P2K9 1392 aa13.16□□□□□ -0.3
SMPD4P1-203ENST00000443839 SETD1BQ9UPS6 1966 aaKnown RBP13.16□□□□□ -0.3
SMPD4P1-203ENST00000443839 EID1Q9Y6B2 187 aa13.16□□□□□ -0.3
SMPD4P1-203ENST00000443839 CENPJQ9HC77 1338 aaPredicted RBP13.15□□□□□ -0.3
SMPD4P1-203ENST00000443839 ASXL1Q8IXJ9 1541 aa13.15□□□□□ -0.3
SMPD4P1-203ENST00000443839 PTPRMP28827 1452 aa13.15□□□□□ -0.3
SMPD4P1-203ENST00000443839 TXNDC2Q86VQ3 553 aa13.15□□□□□ -0.3
SMPD4P1-203ENST00000443839 STK26Q9P289 416 aa13.15□□□□□ -0.3
SMPD4P1-203ENST00000443839 SLIT1O75093 1534 aa13.14□□□□□ -0.31
SMPD4P1-203ENST00000443839 ANP32CO43423 234 aa13.13□□□□□ -0.31
SMPD4P1-203ENST00000443839 CDCA8Q53HL2 280 aa13.13□□□□□ -0.31
SMPD4P1-203ENST00000443839 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
SMPD4P1-203ENST00000443839 LTKP29376 864 aa13.13□□□□□ -0.31
SMPD4P1-203ENST00000443839 ARHGAP23Q9P227 1491 aa13.13□□□□□ -0.31
SMPD4P1-203ENST00000443839 NRXN3Q9Y4C0 1643 aa13.13□□□□□ -0.31
SMPD4P1-203ENST00000443839 ARHGEF28Q8N1W1 1705 aaKnown RBP13.12□□□□□ -0.31
SMPD4P1-203ENST00000443839 PLEKHG1Q9ULL1 1385 aa13.12□□□□□ -0.31
SMPD4P1-203ENST00000443839 SBNO2Q9Y2G9 1366 aa13.12□□□□□ -0.31
SMPD4P1-203ENST00000443839 ZNF142P52746 1687 aaPredicted RBP13.12□□□□□ -0.31
SMPD4P1-203ENST00000443839 QRICH2Q9H0J4 1663 aa13.12□□□□□ -0.31
SMPD4P1-203ENST00000443839 SETD1AO15047 1707 aaKnown RBP13.11□□□□□ -0.31
SMPD4P1-203ENST00000443839 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
SMPD4P1-203ENST00000443839 SAFB2Q14151 953 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMPD4P1-203ENST00000443839 POGKQ9P215 609 aa13.09□□□□□ -0.31
SMPD4P1-203ENST00000443839 METP08581 1390 aa13.09□□□□□ -0.31
SMPD4P1-203ENST00000443839 LRPPRCP42704 1394 aaKnown RBP13.09□□□□□ -0.31
SMPD4P1-203ENST00000443839 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.32
SMPD4P1-203ENST00000443839 PRAM1Q96QH2 718 aa13.08□□□□□ -0.32
SMPD4P1-203ENST00000443839 ADAMTS13Q76LX8 1427 aa13.08□□□□□ -0.32
SMPD4P1-203ENST00000443839 ABCC11Q96J66 1382 aa13.06□□□□□ -0.32
SMPD4P1-203ENST00000443839 ANKLE2Q86XL3 938 aa13.06□□□□□ -0.32
SMPD4P1-203ENST00000443839 SLC26A8Q96RN1 970 aa13.06□□□□□ -0.32
SMPD4P1-203ENST00000443839 DLC1Q96QB1 1528 aa13.05□□□□□ -0.32
SMPD4P1-203ENST00000443839 EVC2Q86UK5 1308 aa13.05□□□□□ -0.32
SMPD4P1-203ENST00000443839 MED14O60244 1454 aa13.04□□□□□ -0.32
SMPD4P1-203ENST00000443839 MINK1Q8N4C8 1332 aaPredicted RBP13.04□□□□□ -0.32
SMPD4P1-203ENST00000443839 SCAF1Q9H7N4 1312 aaKnown RBP13.04□□□□□ -0.32
SMPD4P1-203ENST00000443839 PANK3Q9H999 370 aa13.03□□□□□ -0.32
SMPD4P1-203ENST00000443839 TBX22Q9Y458 520 aa13.03□□□□□ -0.32
SMPD4P1-203ENST00000443839 DIP2AQ14689 1571 aa13.03□□□□□ -0.32
SMPD4P1-203ENST00000443839 KNDC1Q76NI1 1749 aa13.03□□□□□ -0.32
SMPD4P1-203ENST00000443839 CNGB1Q14028 1251 aaPredicted RBP13.03□□□□□ -0.32
SMPD4P1-203ENST00000443839 WAPLQ7Z5K2 1190 aa13.03□□□□□ -0.32
SMPD4P1-203ENST00000443839 TECPR2O15040 1411 aa13.02□□□□□ -0.32
SMPD4P1-203ENST00000443839 TULP4Q9NRJ4 1543 aa13.02□□□□□ -0.32
SMPD4P1-203ENST00000443839 PRKRIP1Q9H875 184 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 198.3 ms