RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 HECW1Q76N89 1606 aa11.12□□□□□ -0.63
R3HDM1-210ENST00000443537 CASKIN1Q8WXD9 1431 aa11.11□□□□□ -0.63
R3HDM1-210ENST00000443537 GPR37O15354 613 aa11.11□□□□□ -0.63
R3HDM1-210ENST00000443537 FOSBP53539 338 aa11.11□□□□□ -0.63
R3HDM1-210ENST00000443537 FHOD3Q2V2M9 1422 aa11.1□□□□□ -0.63
R3HDM1-210ENST00000443537 HIC1Q14526 733 aa11.1□□□□□ -0.63
R3HDM1-210ENST00000443537 AK7Q96M32 723 aa11.1□□□□□ -0.63
R3HDM1-210ENST00000443537 CCDC18Q5T9S5 1454 aa11.1□□□□□ -0.63
R3HDM1-210ENST00000443537 PCF11O94913 1555 aaKnown RBP11.1□□□□□ -0.63
R3HDM1-210ENST00000443537 CFAP43Q8NDM7 1665 aa11.09□□□□□ -0.63
R3HDM1-210ENST00000443537 GNPATO15228 680 aa11.09□□□□□ -0.63
R3HDM1-210ENST00000443537 ZDHHC16Q969W1 377 aa11.09□□□□□ -0.63
R3HDM1-210ENST00000443537 CDHR5Q9HBB8 845 aa11.09□□□□□ -0.63
R3HDM1-210ENST00000443537 LHX6Q9UPM6 363 aa11.09□□□□□ -0.63
R3HDM1-210ENST00000443537 RAPGEF6Q8TEU7 1601 aa11.09□□□□□ -0.63
R3HDM1-210ENST00000443537 PTGDRQ13258 359 aa11.08□□□□□ -0.64
R3HDM1-210ENST00000443537 TSR1Q2NL82 804 aaKnown RBP11.07□□□□□ -0.64
R3HDM1-210ENST00000443537 HOXB1P14653 301 aaPredicted RBP11.06□□□□□ -0.64
R3HDM1-210ENST00000443537 RANGAP1P46060 587 aaPredicted RBP11.06□□□□□ -0.64
R3HDM1-210ENST00000443537 NEUROD2Q15784 382 aa11.06□□□□□ -0.64
R3HDM1-210ENST00000443537 PPP4R3BQ5MIZ7 849 aa11.06□□□□□ -0.64
R3HDM1-210ENST00000443537 PSDA5PKW4 1024 aaPredicted RBP11.05□□□□□ -0.64
R3HDM1-210ENST00000443537 ABCA8O94911 1581 aa11.05□□□□□ -0.64
R3HDM1-210ENST00000443537 PTPRGP23470 1445 aa11.05□□□□□ -0.64
R3HDM1-210ENST00000443537 MINK1Q8N4C8 1332 aaPredicted RBP11.05□□□□□ -0.64
R3HDM1-210ENST00000443537 TIAM1Q13009 1591 aa11.04□□□□□ -0.64
R3HDM1-210ENST00000443537 MAP2K5Q13163 448 aa11.04□□□□□ -0.64
R3HDM1-210ENST00000443537 FECHP22830 423 aa11.03□□□□□ -0.64
R3HDM1-210ENST00000443537 C6orf132Q5T0Z8 1188 aa11.03□□□□□ -0.64
R3HDM1-210ENST00000443537 ADAM33Q9BZ11 813 aa11.03□□□□□ -0.64
R3HDM1-210ENST00000443537 UHRF1BP1LA0JNW5 1464 aa11.03□□□□□ -0.64
R3HDM1-210ENST00000443537 BRPF1P55201 1214 aaPredicted RBP11.02□□□□□ -0.65
R3HDM1-210ENST00000443537 ABCC2Q92887 1545 aa11.02□□□□□ -0.65
R3HDM1-210ENST00000443537 IRF6O14896 467 aa11.01□□□□□ -0.65
R3HDM1-210ENST00000443537 NPDC1Q9NQX5 325 aaPredicted RBP11.01□□□□□ -0.65
R3HDM1-210ENST00000443537 LRRIQ1Q96JM4 1722 aa11.01□□□□□ -0.65
R3HDM1-210ENST00000443537 UACAQ9BZF9 1416 aa11.01□□□□□ -0.65
R3HDM1-210ENST00000443537 ARHGEF11O15085 1522 aa11□□□□□ -0.65
R3HDM1-210ENST00000443537 EPRSP07814 1512 aaKnown RBP11□□□□□ -0.65
R3HDM1-210ENST00000443537 ERCC6L2Q5T890 1561 aa11□□□□□ -0.65
R3HDM1-210ENST00000443537 CERKQ8TCT0 537 aa11□□□□□ -0.65
R3HDM1-210ENST00000443537 CCDC102AQ96A19 550 aa11□□□□□ -0.65
R3HDM1-210ENST00000443537 NUP153P49790 1475 aaKnown RBP11□□□□□ -0.65
R3HDM1-210ENST00000443537 TRIM66O15016 1216 aa10.99□□□□□ -0.65
R3HDM1-210ENST00000443537 EHBP1L1Q8N3D4 1523 aa10.99□□□□□ -0.65
R3HDM1-210ENST00000443537 CDK11AQ9UQ88 783 aaPredicted RBP10.98□□□□□ -0.65
R3HDM1-210ENST00000443537 PLB1Q6P1J6 1458 aa10.98□□□□□ -0.65
R3HDM1-210ENST00000443537 RIMBP3CA6NJZ7 1639 aa10.97□□□□□ -0.65
R3HDM1-210ENST00000443537 RIMBP3BA6NNM3 1639 aa10.97□□□□□ -0.65
R3HDM1-210ENST00000443537 RIMBP3Q9UFD9 1639 aa10.97□□□□□ -0.65
R3HDM1-210ENST00000443537 SUPT6HQ7KZ85 1726 aaKnown RBP10.96□□□□□ -0.65
R3HDM1-210ENST00000443537 LRRC9Q6ZRR7 1453 aa10.96□□□□□ -0.65
R3HDM1-210ENST00000443537 PTPREP23469 700 aa10.96□□□□□ -0.65
R3HDM1-210ENST00000443537 PDE4DQ08499 809 aa10.96□□□□□ -0.65
R3HDM1-210ENST00000443537 BCL2L12Q9HB09 334 aa10.96□□□□□ -0.65
R3HDM1-210ENST00000443537 KDM5BQ9UGL1 1544 aa10.95□□□□□ -0.66
R3HDM1-210ENST00000443537 ERBB3P21860 1342 aa10.95□□□□□ -0.66
R3HDM1-210ENST00000443537 KCNH8Q96L42 1107 aa10.95□□□□□ -0.66
R3HDM1-210ENST00000443537 ADCY10Q96PN6 1610 aa10.95□□□□□ -0.66
R3HDM1-210ENST00000443537 PADI6Q6TGC4 694 aa10.94□□□□□ -0.66
R3HDM1-210ENST00000443537 MTUS2Q5JR59 1369 aa10.93□□□□□ -0.66
R3HDM1-210ENST00000443537 ST18O60284 1047 aa10.93□□□□□ -0.66
R3HDM1-210ENST00000443537 EMP3P54852 163 aa10.93□□□□□ -0.66
R3HDM1-210ENST00000443537 GPBP1L1Q9HC44 474 aaPredicted RBP10.93□□□□□ -0.66
R3HDM1-210ENST00000443537 ZCCHC11Q5TAX3 1644 aaKnown RBP10.93□□□□□ -0.66
R3HDM1-210ENST00000443537 PRSS12P56730 875 aa10.92□□□□□ -0.66
R3HDM1-210ENST00000443537 FAM163AQ96GL9 167 aaPredicted RBP10.92□□□□□ -0.66
R3HDM1-210ENST00000443537 KCNK17Q96T54 332 aa10.92□□□□□ -0.66
R3HDM1-210ENST00000443537 KIF14Q15058 1648 aa10.91□□□□□ -0.66
R3HDM1-210ENST00000443537 CDK13Q14004 1512 aaKnown RBP10.91□□□□□ -0.66
R3HDM1-210ENST00000443537 COL9A1P20849 921 aa10.91□□□□□ -0.66
R3HDM1-210ENST00000443537 TTLL12Q14166 644 aaPredicted RBP10.91□□□□□ -0.66
R3HDM1-210ENST00000443537 VARS2Q5ST30 1063 aaKnown RBP10.91□□□□□ -0.66
R3HDM1-210ENST00000443537 MARVELD3Q96A59 401 aa10.91□□□□□ -0.66
R3HDM1-210ENST00000443537 CDCA7LQ96GN5 454 aa10.91□□□□□ -0.66
R3HDM1-210ENST00000443537 ATP10BO94823 1461 aa10.91□□□□□ -0.66
R3HDM1-210ENST00000443537 TROQ12816 1431 aaPredicted RBP10.91□□□□□ -0.66
R3HDM1-210ENST00000443537 ITSN2Q9NZM3 1697 aa10.9□□□□□ -0.66
R3HDM1-210ENST00000443537 PPP1R3GB7ZBB8 358 aa10.9□□□□□ -0.66
R3HDM1-210ENST00000443537 ATP1B4Q9UN42 357 aaPredicted RBP10.9□□□□□ -0.66
R3HDM1-210ENST00000443537 TMEM132AQ24JP5 1023 aa10.89□□□□□ -0.67
R3HDM1-210ENST00000443537 FAM161AQ3B820 660 aa10.89□□□□□ -0.67
R3HDM1-210ENST00000443537 KDM4CQ9H3R0 1056 aa10.89□□□□□ -0.67
R3HDM1-210ENST00000443537 RBM27Q9P2N5 1060 aaKnown RBP10.89□□□□□ -0.67
R3HDM1-210ENST00000443537 OATP04181 439 aa10.88□□□□□ -0.67
R3HDM1-210ENST00000443537 PLEKHD1A6NEE1 506 aa10.87□□□□□ -0.67
R3HDM1-210ENST00000443537 AMHR2Q16671 573 aa10.87□□□□□ -0.67
R3HDM1-210ENST00000443537 MAPKBP1O60336 1514 aa10.87□□□□□ -0.67
R3HDM1-210ENST00000443537 TTBK1Q5TCY1 1321 aaPredicted RBP10.86□□□□□ -0.67
R3HDM1-210ENST00000443537 FAM205CA6NFA0 338 aa10.86□□□□□ -0.67
R3HDM1-210ENST00000443537 MAGI3Q5TCQ9 1506 aa10.85□□□□□ -0.67
R3HDM1-210ENST00000443537 ADGRG1Q9Y653 693 aa10.85□□□□□ -0.67
R3HDM1-210ENST00000443537 NCOA2Q15596 1464 aa10.85□□□□□ -0.67
R3HDM1-210ENST00000443537 WDR7Q9Y4E6 1490 aa10.85□□□□□ -0.67
R3HDM1-210ENST00000443537 PARP9Q8IXQ6 854 aa10.84□□□□□ -0.67
R3HDM1-210ENST00000443537 TTC13Q8NBP0 860 aa10.84□□□□□ -0.67
R3HDM1-210ENST00000443537 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
R3HDM1-210ENST00000443537 MYO5CQ9NQX4 1742 aa10.84□□□□□ -0.67
R3HDM1-210ENST00000443537 ARAP3Q8WWN8 1544 aa10.84□□□□□ -0.67
R3HDM1-210ENST00000443537 MIA2Q96PC5 1412 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms