RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 GGT6Q6P531 493 aa12.97□□□□□ -0.33
NR1I3-211ENST00000442691 SSUH2Q9Y2M2 353 aa12.97□□□□□ -0.33
NR1I3-211ENST00000442691 CLTCL1P53675 1640 aa12.96□□□□□ -0.33
NR1I3-211ENST00000442691 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.33
NR1I3-211ENST00000442691 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
NR1I3-211ENST00000442691 ADGRB3O60242 1522 aa12.94□□□□□ -0.34
NR1I3-211ENST00000442691 MROH2AA6NES4 1674 aa12.94□□□□□ -0.34
NR1I3-211ENST00000442691 RALGAPBQ86X10 1494 aa12.94□□□□□ -0.34
NR1I3-211ENST00000442691 SIGLEC1Q9BZZ2 1709 aa12.93□□□□□ -0.34
NR1I3-211ENST00000442691 MYOM2P54296 1465 aa12.92□□□□□ -0.34
NR1I3-211ENST00000442691 SPATA31D1Q6ZQQ2 1576 aa12.92□□□□□ -0.34
NR1I3-211ENST00000442691 SLC52A1Q9NWF4 448 aa12.92□□□□□ -0.34
NR1I3-211ENST00000442691 PRAG1Q86YV5 1406 aa12.91□□□□□ -0.34
NR1I3-211ENST00000442691 PREX1Q8TCU6 1659 aa12.91□□□□□ -0.34
NR1I3-211ENST00000442691 LAMC1P11047 1609 aa12.91□□□□□ -0.34
NR1I3-211ENST00000442691 ERVK-7P63135 1459 aa12.91□□□□□ -0.34
NR1I3-211ENST00000442691 SYNMO15061 1565 aa12.9□□□□□ -0.34
NR1I3-211ENST00000442691 KIF1BO60333 1816 aa12.9□□□□□ -0.34
NR1I3-211ENST00000442691 RPGRIP1LQ68CZ1 1315 aa12.89□□□□□ -0.35
NR1I3-211ENST00000442691 GPRASP1Q5JY77 1395 aa12.89□□□□□ -0.35
NR1I3-211ENST00000442691 CLTCQ00610 1675 aaKnown RBP12.89□□□□□ -0.35
NR1I3-211ENST00000442691 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
NR1I3-211ENST00000442691 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
NR1I3-211ENST00000442691 KIAA1210Q9ULL0 1709 aa12.87□□□□□ -0.35
NR1I3-211ENST00000442691 KDM5AP29375 1690 aaKnown RBP12.86□□□□□ -0.35
NR1I3-211ENST00000442691 IFT172Q9UG01 1749 aa12.86□□□□□ -0.35
NR1I3-211ENST00000442691 DCAF11Q8TEB1 546 aa12.86□□□□□ -0.35
NR1I3-211ENST00000442691 ESF1Q9H501 851 aaKnown RBP12.86□□□□□ -0.35
NR1I3-211ENST00000442691 TRPM1Q7Z4N2 1603 aa12.86□□□□□ -0.35
NR1I3-211ENST00000442691 ZFYVE9O95405 1425 aa12.86□□□□□ -0.35
NR1I3-211ENST00000442691 MADDQ8WXG6 1647 aa12.85□□□□□ -0.35
NR1I3-211ENST00000442691 NBPF8Q3BBV2 869 aa12.85□□□□□ -0.35
NR1I3-211ENST00000442691 STAG3Q9UJ98 1225 aa12.85□□□□□ -0.35
NR1I3-211ENST00000442691 UGGT1Q9NYU2 1555 aa12.85□□□□□ -0.35
NR1I3-211ENST00000442691 ZMYM3Q14202 1370 aa12.84□□□□□ -0.35
NR1I3-211ENST00000442691 EIF4G2P78344 907 aaKnown RBP eCLIP12.84□□□□□ -0.35
NR1I3-211ENST00000442691 ARID4BQ4LE39 1312 aaPredicted RBP12.83□□□□□ -0.36
NR1I3-211ENST00000442691 TMEM131LA2VDJ0 1609 aa12.82□□□□□ -0.36
NR1I3-211ENST00000442691 NLRP1Q9C000 1473 aa12.82□□□□□ -0.36
NR1I3-211ENST00000442691 PPLO60437 1756 aa12.81□□□□□ -0.36
NR1I3-211ENST00000442691 NEXMIFQ5QGS0 1516 aa12.8□□□□□ -0.36
NR1I3-211ENST00000442691 RGL3Q3MIN7 710 aa12.8□□□□□ -0.36
NR1I3-211ENST00000442691 SETBP1Q9Y6X0 1596 aa12.8□□□□□ -0.36
NR1I3-211ENST00000442691 ROCK2O75116 1388 aaKnown RBP12.8□□□□□ -0.36
NR1I3-211ENST00000442691 FER1L4A9Z1Z3 1794 aa12.79□□□□□ -0.36
NR1I3-211ENST00000442691 TNRQ92752 1358 aa12.79□□□□□ -0.36
NR1I3-211ENST00000442691 USP47Q96K76 1375 aa12.79□□□□□ -0.36
NR1I3-211ENST00000442691 PIK3C2GO75747 1445 aa12.79□□□□□ -0.36
NR1I3-211ENST00000442691 IDI1Q13907 227 aa12.78□□□□□ -0.36
NR1I3-211ENST00000442691 VGFO15240 615 aaPredicted RBP12.77□□□□□ -0.37
NR1I3-211ENST00000442691 CARD11Q9BXL7 1154 aa12.77□□□□□ -0.37
NR1I3-211ENST00000442691 ADAMTSL3P82987 1691 aa12.77□□□□□ -0.37
NR1I3-211ENST00000442691 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
NR1I3-211ENST00000442691 HSPA5P11021 654 aaKnown RBP12.76□□□□□ -0.37
NR1I3-211ENST00000442691 MLECQ14165 292 aa12.76□□□□□ -0.37
NR1I3-211ENST00000442691 KDM2AQ9Y2K7 1162 aa12.76□□□□□ -0.37
NR1I3-211ENST00000442691 A2ML1A8K2U0 1454 aa12.76□□□□□ -0.37
NR1I3-211ENST00000442691 POLR1AO95602 1720 aaPredicted RBP12.75□□□□□ -0.37
NR1I3-211ENST00000442691 C3P01024 1663 aa12.75□□□□□ -0.37
NR1I3-211ENST00000442691 DIEXFQ68CQ4 756 aaKnown RBP12.75□□□□□ -0.37
NR1I3-211ENST00000442691 KLHL34Q8N239 644 aa12.75□□□□□ -0.37
NR1I3-211ENST00000442691 SCAF11Q99590 1463 aaKnown RBP12.75□□□□□ -0.37
NR1I3-211ENST00000442691 IQGAP1P46940 1657 aa12.74□□□□□ -0.37
NR1I3-211ENST00000442691 EIF3AQ14152 1382 aaKnown RBP12.74□□□□□ -0.37
NR1I3-211ENST00000442691 ZNF326Q5BKZ1 582 aaKnown RBP12.74□□□□□ -0.37
NR1I3-211ENST00000442691 FBXO31Q5XUX0 539 aaPredicted RBP12.74□□□□□ -0.37
NR1I3-211ENST00000442691 PLCD3Q8N3E9 789 aa12.73□□□□□ -0.37
NR1I3-211ENST00000442691 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.73□□□□□ -0.37
NR1I3-211ENST00000442691 HDGFP51858 240 aaKnown RBP12.72□□□□□ -0.37
NR1I3-211ENST00000442691 MIER1Q8N108 512 aa12.72□□□□□ -0.37
NR1I3-211ENST00000442691 SBNO2Q9Y2G9 1366 aa12.71□□□□□ -0.37
NR1I3-211ENST00000442691 ADGRF5Q8IZF2 1346 aa12.71□□□□□ -0.37
NR1I3-211ENST00000442691 C14orf93Q9H972 538 aaKnown RBP12.71□□□□□ -0.37
NR1I3-211ENST00000442691 ADGRB1O14514 1584 aa12.71□□□□□ -0.37
NR1I3-211ENST00000442691 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.38
NR1I3-211ENST00000442691 CFAP65Q6ZU64 1925 aaKnown RBP12.7□□□□□ -0.38
NR1I3-211ENST00000442691 MYO3AQ8NEV4 1616 aa12.7□□□□□ -0.38
NR1I3-211ENST00000442691 CHGAP10645 457 aaKnown RBP12.7□□□□□ -0.38
NR1I3-211ENST00000442691 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
NR1I3-211ENST00000442691 SLIT1O75093 1534 aa12.69□□□□□ -0.38
NR1I3-211ENST00000442691 RBM42Q9BTD8 480 aaKnown RBP12.69□□□□□ -0.38
NR1I3-211ENST00000442691 RIMS2Q9UQ26 1411 aa12.69□□□□□ -0.38
NR1I3-211ENST00000442691 ZNF142P52746 1687 aaPredicted RBP12.68□□□□□ -0.38
NR1I3-211ENST00000442691 ARHGAP23Q9P227 1491 aa12.68□□□□□ -0.38
NR1I3-211ENST00000442691 SPOCK2Q92563 424 aa12.68□□□□□ -0.38
NR1I3-211ENST00000442691 TMEM2Q9UHN6 1383 aa12.68□□□□□ -0.38
NR1I3-211ENST00000442691 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
NR1I3-211ENST00000442691 MYO5BQ9ULV0 1848 aa12.67□□□□□ -0.38
NR1I3-211ENST00000442691 NBPF1Q3BBV0 1214 aa12.67□□□□□ -0.38
NR1I3-211ENST00000442691 WASHC2AQ641Q2 1341 aa12.66□□□□□ -0.38
NR1I3-211ENST00000442691 CEP170BQ9Y4F5 1589 aaPredicted RBP12.64□□□□□ -0.39
NR1I3-211ENST00000442691 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
NR1I3-211ENST00000442691 CDCA8Q53HL2 280 aa12.64□□□□□ -0.39
NR1I3-211ENST00000442691 CFAP70Q5T0N1 1121 aa12.64□□□□□ -0.39
NR1I3-211ENST00000442691 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
NR1I3-211ENST00000442691 DIP2AQ14689 1571 aa12.64□□□□□ -0.39
NR1I3-211ENST00000442691 KIF7Q2M1P5 1343 aa12.63□□□□□ -0.39
NR1I3-211ENST00000442691 DLC1Q96QB1 1528 aa12.63□□□□□ -0.39
NR1I3-211ENST00000442691 ALKQ9UM73 1620 aa12.63□□□□□ -0.39
NR1I3-211ENST00000442691 THEMISQ8N1K5 641 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms