RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 PPP6R1Q9UPN7 881 aa18.18■□□□□ 0.5
CPSF4-206ENST00000441580 RPGRIP1LQ68CZ1 1315 aa18.18■□□□□ 0.5
CPSF4-206ENST00000441580 KTN1Q86UP2 1357 aaKnown RBP18.17■□□□□ 0.5
CPSF4-206ENST00000441580 NBPF1Q3BBV0 1214 aa18.17■□□□□ 0.5
CPSF4-206ENST00000441580 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
CPSF4-206ENST00000441580 PIK3C2GO75747 1445 aa18.16■□□□□ 0.5
CPSF4-206ENST00000441580 ERVK-7P63135 1459 aa18.16■□□□□ 0.5
CPSF4-206ENST00000441580 NEXMIFQ5QGS0 1516 aa18.16■□□□□ 0.5
CPSF4-206ENST00000441580 CLTCQ00610 1675 aaKnown RBP18.15■□□□□ 0.5
CPSF4-206ENST00000441580 PRKRIP1Q9H875 184 aaPredicted RBP18.15■□□□□ 0.5
CPSF4-206ENST00000441580 SPATA31D1Q6ZQQ2 1576 aa18.13■□□□□ 0.49
CPSF4-206ENST00000441580 KDM5AP29375 1690 aaKnown RBP18.13■□□□□ 0.49
CPSF4-206ENST00000441580 TMF1P82094 1093 aa18.12■□□□□ 0.49
CPSF4-206ENST00000441580 TMEM131LA2VDJ0 1609 aa18.12■□□□□ 0.49
CPSF4-206ENST00000441580 CFAP65Q6ZU64 1925 aaKnown RBP18.11■□□□□ 0.49
CPSF4-206ENST00000441580 TESK2Q96S53 571 aa18.11■□□□□ 0.49
CPSF4-206ENST00000441580 DISP3Q9P2K9 1392 aa18.11■□□□□ 0.49
CPSF4-206ENST00000441580 ZFYVE9O95405 1425 aa18.1■□□□□ 0.49
CPSF4-206ENST00000441580 SLC24A1O60721 1099 aa18.1■□□□□ 0.49
CPSF4-206ENST00000441580 POLR3GLQ9BT43 218 aa18.1■□□□□ 0.49
CPSF4-206ENST00000441580 SLC52A1Q9NWF4 448 aa18.1■□□□□ 0.49
CPSF4-206ENST00000441580 ADGRB1O14514 1584 aa18.09■□□□□ 0.49
CPSF4-206ENST00000441580 SBNO2Q9Y2G9 1366 aa18.09■□□□□ 0.49
CPSF4-206ENST00000441580 CDCA8Q53HL2 280 aa18.08■□□□□ 0.48
CPSF4-206ENST00000441580 MYOM1P52179 1685 aa18.08■□□□□ 0.48
CPSF4-206ENST00000441580 ADGRF5Q8IZF2 1346 aa18.07■□□□□ 0.48
CPSF4-206ENST00000441580 MYO5BQ9ULV0 1848 aa18.07■□□□□ 0.48
CPSF4-206ENST00000441580 GTF3C3Q9Y5Q9 886 aa18.06■□□□□ 0.48
CPSF4-206ENST00000441580 QRICH2Q9H0J4 1663 aa18.06■□□□□ 0.48
CPSF4-206ENST00000441580 CHGAP10645 457 aaKnown RBP18.05■□□□□ 0.48
CPSF4-206ENST00000441580 ARHGEF28Q8N1W1 1705 aaKnown RBP18.03■□□□□ 0.48
CPSF4-206ENST00000441580 MRS2Q9HD23 443 aa18.02■□□□□ 0.48
CPSF4-206ENST00000441580 RALBP1Q15311 655 aa18.01■□□□□ 0.47
CPSF4-206ENST00000441580 VGFO15240 615 aaPredicted RBP18■□□□□ 0.47
CPSF4-206ENST00000441580 CFAP70Q5T0N1 1121 aa18■□□□□ 0.47
CPSF4-206ENST00000441580 PARD3Q8TEW0 1356 aa18■□□□□ 0.47
CPSF4-206ENST00000441580 C14orf93Q9H972 538 aaKnown RBP17.99■□□□□ 0.47
CPSF4-206ENST00000441580 BRD4O60885 1362 aaPredicted RBP17.99■□□□□ 0.47
CPSF4-206ENST00000441580 MYBBP1AQ9BQG0 1328 aaKnown RBP17.98■□□□□ 0.47
CPSF4-206ENST00000441580 ASXL1Q8IXJ9 1541 aa17.97■□□□□ 0.47
CPSF4-206ENST00000441580 IDI1Q13907 227 aa17.96■□□□□ 0.47
CPSF4-206ENST00000441580 CENPJQ9HC77 1338 aaPredicted RBP17.95■□□□□ 0.46
CPSF4-206ENST00000441580 A2ML1A8K2U0 1454 aa17.95■□□□□ 0.46
CPSF4-206ENST00000441580 ESF1Q9H501 851 aaKnown RBP17.93■□□□□ 0.46
CPSF4-206ENST00000441580 NPC1L1Q9UHC9 1359 aa17.92■□□□□ 0.46
CPSF4-206ENST00000441580 HNRNPUQ00839 825 aaKnown RBP eCLIP17.92■□□□□ 0.46
CPSF4-206ENST00000441580 USP32Q8NFA0 1604 aa17.91■□□□□ 0.46
CPSF4-206ENST00000441580 SETD1AO15047 1707 aaKnown RBP17.9■□□□□ 0.46
CPSF4-206ENST00000441580 ALKQ9UM73 1620 aa17.9■□□□□ 0.46
CPSF4-206ENST00000441580 FER1L4A9Z1Z3 1794 aa17.89■□□□□ 0.45
CPSF4-206ENST00000441580 DLC1Q96QB1 1528 aa17.89■□□□□ 0.45
CPSF4-206ENST00000441580 PER1O15534 1290 aaPredicted RBP17.89■□□□□ 0.45
CPSF4-206ENST00000441580 CCDC184Q52MB2 194 aa17.89■□□□□ 0.45
CPSF4-206ENST00000441580 NLRP13Q86W25 1043 aa17.89■□□□□ 0.45
CPSF4-206ENST00000441580 ZBED9Q6R2W3 1325 aa17.89■□□□□ 0.45
CPSF4-206ENST00000441580 RIMS2Q9UQ26 1411 aa17.89■□□□□ 0.45
CPSF4-206ENST00000441580 PANK3Q9H999 370 aa17.88■□□□□ 0.45
CPSF4-206ENST00000441580 INSRP06213 1382 aa17.88■□□□□ 0.45
CPSF4-206ENST00000441580 ZMYM3Q14202 1370 aa17.88■□□□□ 0.45
CPSF4-206ENST00000441580 TNRQ92752 1358 aa17.88■□□□□ 0.45
CPSF4-206ENST00000441580 UBR1Q8IWV7 1749 aa17.87■□□□□ 0.45
CPSF4-206ENST00000441580 FBXO31Q5XUX0 539 aaPredicted RBP17.87■□□□□ 0.45
CPSF4-206ENST00000441580 NLRP1Q9C000 1473 aa17.87■□□□□ 0.45
CPSF4-206ENST00000441580 TULP4Q9NRJ4 1543 aa17.87■□□□□ 0.45
CPSF4-206ENST00000441580 STAG3Q9UJ98 1225 aa17.86■□□□□ 0.45
CPSF4-206ENST00000441580 LRPPRCP42704 1394 aaKnown RBP17.86■□□□□ 0.45
CPSF4-206ENST00000441580 KNDC1Q76NI1 1749 aa17.86■□□□□ 0.45
CPSF4-206ENST00000441580 PTPRMP28827 1452 aa17.85■□□□□ 0.45
CPSF4-206ENST00000441580 MLECQ14165 292 aa17.85■□□□□ 0.45
CPSF4-206ENST00000441580 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
CPSF4-206ENST00000441580 TMC1Q8TDI8 760 aa17.85■□□□□ 0.45
CPSF4-206ENST00000441580 PUS7Q96PZ0 661 aaKnown RBP17.85■□□□□ 0.45
CPSF4-206ENST00000441580 NRXN3Q9Y4C0 1643 aa17.84■□□□□ 0.45
CPSF4-206ENST00000441580 YTHDC2Q9H6S0 1430 aaKnown RBP17.84■□□□□ 0.45
CPSF4-206ENST00000441580 NINLQ9Y2I6 1382 aa17.84■□□□□ 0.45
CPSF4-206ENST00000441580 KNSTRNQ9Y448 316 aa17.84■□□□□ 0.45
CPSF4-206ENST00000441580 TRAK1Q9UPV9 953 aa17.83■□□□□ 0.44
CPSF4-206ENST00000441580 C3P01024 1663 aa17.83■□□□□ 0.44
CPSF4-206ENST00000441580 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.81■□□□□ 0.44
CPSF4-206ENST00000441580 EVC2Q86UK5 1308 aa17.8■□□□□ 0.44
CPSF4-206ENST00000441580 PNISRQ8TF01 805 aaKnown RBP17.79■□□□□ 0.44
CPSF4-206ENST00000441580 AMER1Q5JTC6 1135 aaPredicted RBP17.78■□□□□ 0.44
CPSF4-206ENST00000441580 TMEM132EQ6IEE7 984 aa17.78■□□□□ 0.44
CPSF4-206ENST00000441580 CPS1P31327 1500 aa17.77■□□□□ 0.44
CPSF4-206ENST00000441580 NEFLP07196 543 aa17.77■□□□□ 0.44
CPSF4-206ENST00000441580 CNGB1Q14028 1251 aaPredicted RBP17.77■□□□□ 0.44
CPSF4-206ENST00000441580 CC2D1BQ5T0F9 858 aaKnown RBP17.77■□□□□ 0.44
CPSF4-206ENST00000441580 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.44
CPSF4-206ENST00000441580 BLMP54132 1417 aaPredicted RBP17.77■□□□□ 0.44
CPSF4-206ENST00000441580 ATAD2Q6PL18 1390 aa17.77■□□□□ 0.43
CPSF4-206ENST00000441580 HDGFP51858 240 aaKnown RBP17.76■□□□□ 0.43
CPSF4-206ENST00000441580 NSD2O96028 1365 aa17.75■□□□□ 0.43
CPSF4-206ENST00000441580 ANKRD36BQ8N2N9 1353 aa17.75■□□□□ 0.43
CPSF4-206ENST00000441580 TECPR2O15040 1411 aa17.74■□□□□ 0.43
CPSF4-206ENST00000441580 NSD3Q9BZ95 1437 aa17.74■□□□□ 0.43
CPSF4-206ENST00000441580 TMEM2Q9UHN6 1383 aa17.74■□□□□ 0.43
CPSF4-206ENST00000441580 SLIT1O75093 1534 aa17.73■□□□□ 0.43
CPSF4-206ENST00000441580 DIP2AQ14689 1571 aa17.72■□□□□ 0.43
CPSF4-206ENST00000441580 TRHP20396 242 aaPredicted RBP17.72■□□□□ 0.43
CPSF4-206ENST00000441580 ANKRD26Q9UPS8 1709 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms