RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 CHGAP10645 457 aaKnown RBP15.8■□□□□ 0.12
SLC38A1-202ENST00000439706 MCM4P33991 863 aa15.8■□□□□ 0.12
SLC38A1-202ENST00000439706 GLIPR1L2Q4G1C9 344 aa15.8■□□□□ 0.12
SLC38A1-202ENST00000439706 ZMYND15Q9H091 742 aa15.8■□□□□ 0.12
SLC38A1-202ENST00000439706 ADGBQ8N7X0 1667 aa15.79■□□□□ 0.12
SLC38A1-202ENST00000439706 TRIM44Q96DX7 344 aaPredicted RBP15.79■□□□□ 0.12
SLC38A1-202ENST00000439706 FTSJ3Q8IY81 847 aaKnown RBP15.78■□□□□ 0.12
SLC38A1-202ENST00000439706 MYH16Q9H6N6 1097 aa15.78■□□□□ 0.12
SLC38A1-202ENST00000439706 TROQ12816 1431 aaPredicted RBP15.78■□□□□ 0.12
SLC38A1-202ENST00000439706 UHRF1BP1Q6BDS2 1440 aa15.78■□□□□ 0.12
SLC38A1-202ENST00000439706 JPH4Q96JJ6 628 aa15.77■□□□□ 0.12
SLC38A1-202ENST00000439706 BLMP54132 1417 aaPredicted RBP15.77■□□□□ 0.12
SLC38A1-202ENST00000439706 CGNL1Q0VF96 1302 aa15.77■□□□□ 0.11
SLC38A1-202ENST00000439706 MAPK8IP3Q9UPT6 1336 aa15.77■□□□□ 0.11
SLC38A1-202ENST00000439706 WWC1Q8IX03 1113 aa15.76■□□□□ 0.11
SLC38A1-202ENST00000439706 PRAG1Q86YV5 1406 aa15.76■□□□□ 0.11
SLC38A1-202ENST00000439706 ZNF608Q9ULD9 1512 aaPredicted RBP15.76■□□□□ 0.11
SLC38A1-202ENST00000439706 C22orf23Q9BZE7 217 aa15.76■□□□□ 0.11
SLC38A1-202ENST00000439706 ANTXR1Q9H6X2 564 aa15.75■□□□□ 0.11
SLC38A1-202ENST00000439706 ADGRL2O95490 1459 aa15.75■□□□□ 0.11
SLC38A1-202ENST00000439706 ITSN2Q9NZM3 1697 aa15.75■□□□□ 0.11
SLC38A1-202ENST00000439706 TSR2Q969E8 191 aaKnown RBP15.74■□□□□ 0.11
SLC38A1-202ENST00000439706 ZNF521Q96K83 1311 aa15.74■□□□□ 0.11
SLC38A1-202ENST00000439706 NCLP19338 710 aaKnown RBP15.74■□□□□ 0.11
SLC38A1-202ENST00000439706 TBC1D32Q96NH3 1257 aa15.74■□□□□ 0.11
SLC38A1-202ENST00000439706 CROCC2H7BZ55 1655 aa15.74■□□□□ 0.11
SLC38A1-202ENST00000439706 ITPRIPQ8IWB1 547 aa15.73■□□□□ 0.11
SLC38A1-202ENST00000439706 ZMYM4Q5VZL5 1548 aa15.73■□□□□ 0.11
SLC38A1-202ENST00000439706 TCP11L2Q8N4U5 519 aa15.73■□□□□ 0.11
SLC38A1-202ENST00000439706 MORC1Q86VD1 984 aa15.72■□□□□ 0.11
SLC38A1-202ENST00000439706 HSCBQ8IWL3 235 aa15.72■□□□□ 0.11
SLC38A1-202ENST00000439706 RWDD1Q9H446 243 aaPredicted RBP15.72■□□□□ 0.11
SLC38A1-202ENST00000439706 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
SLC38A1-202ENST00000439706 SAFB2Q14151 953 aaKnown RBP eCLIP15.71■□□□□ 0.11
SLC38A1-202ENST00000439706 MAGI2Q86UL8 1455 aa15.71■□□□□ 0.11
SLC38A1-202ENST00000439706 HSP90AB1P08238 724 aaKnown RBP15.71■□□□□ 0.11
SLC38A1-202ENST00000439706 RARSP54136 660 aaKnown RBP15.71■□□□□ 0.11
SLC38A1-202ENST00000439706 CFAP70Q5T0N1 1121 aa15.71■□□□□ 0.11
SLC38A1-202ENST00000439706 PMFBP1Q8TBY8 1022 aa15.71■□□□□ 0.11
SLC38A1-202ENST00000439706 NKTRP30414 1462 aaKnown RBP15.71■□□□□ 0.1
SLC38A1-202ENST00000439706 TPRNQ4KMQ1 711 aa15.71■□□□□ 0.1
SLC38A1-202ENST00000439706 RBM10P98175 930 aaKnown RBP15.7■□□□□ 0.1
SLC38A1-202ENST00000439706 PDE3AQ14432 1141 aa15.7■□□□□ 0.1
SLC38A1-202ENST00000439706 GRPEL1Q9HAV7 217 aa15.7■□□□□ 0.1
SLC38A1-202ENST00000439706 U2AF1L5P0DN76 240 aaPredicted RBP15.7■□□□□ 0.1
SLC38A1-202ENST00000439706 U2AF1Q01081 240 aaKnown RBP eCLIP15.7■□□□□ 0.12e-6■□□□□ 9.2
SLC38A1-202ENST00000439706 LNPKQ9C0E8 428 aa15.7■□□□□ 0.1
SLC38A1-202ENST00000439706 U2SURPO15042 1029 aaKnown RBP15.69■□□□□ 0.1
SLC38A1-202ENST00000439706 CHMP5Q9NZZ3 219 aa15.69■□□□□ 0.1
SLC38A1-202ENST00000439706 ESPNB1AK53 854 aa15.69■□□□□ 0.1
SLC38A1-202ENST00000439706 NUTM2DQ5VT03 806 aaPredicted RBP15.69■□□□□ 0.1
SLC38A1-202ENST00000439706 CARD14Q9BXL6 1004 aa15.69■□□□□ 0.1
SLC38A1-202ENST00000439706 ERBB4Q15303 1308 aa15.69■□□□□ 0.1
SLC38A1-202ENST00000439706 GRIN2AQ12879 1464 aa15.68■□□□□ 0.1
SLC38A1-202ENST00000439706 SMC4Q9NTJ3 1288 aa15.68■□□□□ 0.1
SLC38A1-202ENST00000439706 CDCA8Q53HL2 280 aa15.68■□□□□ 0.1
SLC38A1-202ENST00000439706 EIF3AQ14152 1382 aaKnown RBP15.68■□□□□ 0.1
SLC38A1-202ENST00000439706 ARHGEF12Q9NZN5 1544 aa15.67■□□□□ 0.1
SLC38A1-202ENST00000439706 SLC12A5Q9H2X9 1139 aa15.67■□□□□ 0.1
SLC38A1-202ENST00000439706 ADCY10Q96PN6 1610 aa15.67■□□□□ 0.1
SLC38A1-202ENST00000439706 GAS2L3Q86XJ1 694 aa15.67■□□□□ 0.1
SLC38A1-202ENST00000439706 TRAK1Q9UPV9 953 aa15.67■□□□□ 0.1
SLC38A1-202ENST00000439706 IFT140Q96RY7 1462 aa15.67■□□□□ 0.1
SLC38A1-202ENST00000439706 COL17A1Q9UMD9 1497 aaPredicted RBP15.67■□□□□ 0.1
SLC38A1-202ENST00000439706 A2MP01023 1474 aa15.66■□□□□ 0.1
SLC38A1-202ENST00000439706 MRE11P49959 708 aa15.65■□□□□ 0.1
SLC38A1-202ENST00000439706 TRMT2AQ8IZ69 625 aaKnown RBP15.65■□□□□ 0.1
SLC38A1-202ENST00000439706 CLCN1P35523 988 aa15.65■□□□□ 0.1
SLC38A1-202ENST00000439706 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
SLC38A1-202ENST00000439706 MTHFSP49914 203 aa15.65■□□□□ 0.1
SLC38A1-202ENST00000439706 E9PCH4 1651 aa15.64■□□□□ 0.09
SLC38A1-202ENST00000439706 FOXD4L5Q5VV16 416 aaPredicted RBP15.64■□□□□ 0.09
SLC38A1-202ENST00000439706 FOXD4L4Q8WXT5 416 aaPredicted RBP15.64■□□□□ 0.09
SLC38A1-202ENST00000439706 C1orf115Q9H7X2 142 aa15.64■□□□□ 0.09
SLC38A1-202ENST00000439706 ELL2O00472 640 aaPredicted RBP15.63■□□□□ 0.09
SLC38A1-202ENST00000439706 CDC42BPAQ5VT25 1732 aa15.63■□□□□ 0.09
SLC38A1-202ENST00000439706 TNPO1Q92973 898 aaKnown RBP15.63■□□□□ 0.09
SLC38A1-202ENST00000439706 DZIP1LQ8IYY4 767 aaKnown RBP15.62■□□□□ 0.09
SLC38A1-202ENST00000439706 CEP170Q5SW79 1584 aa15.62■□□□□ 0.09
SLC38A1-202ENST00000439706 APBB1O00213 710 aa15.61■□□□□ 0.09
SLC38A1-202ENST00000439706 TMEM132EQ6IEE7 984 aa15.61■□□□□ 0.09
SLC38A1-202ENST00000439706 FSD2A1L4K1 749 aa15.61■□□□□ 0.09
SLC38A1-202ENST00000439706 EXOSC9Q06265 439 aaKnown RBP15.61■□□□□ 0.09
SLC38A1-202ENST00000439706 MPNDQ8N594 471 aa15.61■□□□□ 0.09
SLC38A1-202ENST00000439706 FAM13BQ9NYF5 915 aa15.61■□□□□ 0.09
SLC38A1-202ENST00000439706 PLEKHH2Q8IVE3 1493 aa15.61■□□□□ 0.09
SLC38A1-202ENST00000439706 ZKSCAN2Q63HK3 967 aa15.6■□□□□ 0.09
SLC38A1-202ENST00000439706 PLA2R1Q13018 1463 aa15.6■□□□□ 0.09
SLC38A1-202ENST00000439706 SHANK2Q9UPX8 1470 aa15.6■□□□□ 0.09
SLC38A1-202ENST00000439706 EIF4G3O43432 1585 aaKnown RBP15.6■□□□□ 0.09
SLC38A1-202ENST00000439706 KDM5DQ9BY66 1539 aa15.6■□□□□ 0.09
SLC38A1-202ENST00000439706 FAM135AQ9P2D6 1515 aa15.6■□□□□ 0.09
SLC38A1-202ENST00000439706 MVPQ14764 893 aaKnown RBP15.59■□□□□ 0.09
SLC38A1-202ENST00000439706 RUNDC1Q96C34 613 aa15.59■□□□□ 0.09
SLC38A1-202ENST00000439706 KIAA1211Q6ZU35 1233 aa15.59■□□□□ 0.09
SLC38A1-202ENST00000439706 ANKRD45Q5TZF3 282 aa15.58■□□□□ 0.09
SLC38A1-202ENST00000439706 AFAP1Q8N556 730 aa15.58■□□□□ 0.09
SLC38A1-202ENST00000439706 ANP32BQ92688 251 aaKnown RBP15.58■□□□□ 0.08
SLC38A1-202ENST00000439706 DDX49Q9Y6V7 483 aaKnown RBP15.58■□□□□ 0.08
SLC38A1-202ENST00000439706 CD2BP2O95400 341 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms