RNA–Protein interactions for RNA: ENST00000439673.6

TSC2-207, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,287 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-207ENST00000439673 KIF7Q2M1P5 1343 aa19.94■□□□□ 0.78
TSC2-207ENST00000439673 MYOM3Q5VTT5 1437 aa19.94■□□□□ 0.78
TSC2-207ENST00000439673 TPD52L1Q16890 204 aaPredicted RBP19.94■□□□□ 0.78
TSC2-207ENST00000439673 TEFQ10587 303 aa19.93■□□□□ 0.78
TSC2-207ENST00000439673 GPS2Q13227 327 aa19.93■□□□□ 0.78
TSC2-207ENST00000439673 FOXD4L6Q3SYB3 417 aaPredicted RBP19.92■□□□□ 0.78
TSC2-207ENST00000439673 FOXD4L3Q6VB84 417 aaPredicted RBP19.92■□□□□ 0.78
TSC2-207ENST00000439673 RIPK4P57078 832 aa19.92■□□□□ 0.78
TSC2-207ENST00000439673 NEXNQ0ZGT2 675 aa19.92■□□□□ 0.78
TSC2-207ENST00000439673 CEP89Q96ST8 783 aa19.91■□□□□ 0.78
TSC2-207ENST00000439673 C1orf141Q5JVX7 400 aa19.91■□□□□ 0.78
TSC2-207ENST00000439673 INTS3Q68E01 1043 aaKnown RBP19.91■□□□□ 0.78
TSC2-207ENST00000439673 AKAP17AQ02040 695 aaKnown RBP19.91■□□□□ 0.78
TSC2-207ENST00000439673 ATAD2BQ9ULI0 1458 aa19.91■□□□□ 0.78
TSC2-207ENST00000439673 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.9■□□□□ 0.78
TSC2-207ENST00000439673 FRAT2O75474 233 aaPredicted RBP19.9■□□□□ 0.78
TSC2-207ENST00000439673 SYNE3Q6ZMZ3 975 aa19.9■□□□□ 0.78
TSC2-207ENST00000439673 MIA2Q96PC5 1412 aa19.9■□□□□ 0.78
TSC2-207ENST00000439673 NUTM2FA1L443 756 aa19.89■□□□□ 0.78
TSC2-207ENST00000439673 C22orf23Q9BZE7 217 aa19.89■□□□□ 0.78
TSC2-207ENST00000439673 MARCH6O60337 910 aa19.89■□□□□ 0.77
TSC2-207ENST00000439673 RNF20Q5VTR2 975 aa19.89■□□□□ 0.77
TSC2-207ENST00000439673 FGD6Q6ZV73 1430 aa19.89■□□□□ 0.77
TSC2-207ENST00000439673 MCTP1Q6DN14 999 aa19.89■□□□□ 0.77
TSC2-207ENST00000439673 BRD4O60885 1362 aaPredicted RBP19.89■□□□□ 0.77
TSC2-207ENST00000439673 C9orf78Q9NZ63 289 aaPredicted RBP19.89■□□□□ 0.77
TSC2-207ENST00000439673 PES1O00541 588 aaKnown RBP19.88■□□□□ 0.77
TSC2-207ENST00000439673 VSIG10Q8N0Z9 540 aa19.88■□□□□ 0.77
TSC2-207ENST00000439673 GNAI1P63096 354 aa19.87■□□□□ 0.77
TSC2-207ENST00000439673 NFKBIBQ15653 356 aa19.87■□□□□ 0.77
TSC2-207ENST00000439673 TPM2P07951 284 aa19.87■□□□□ 0.77
TSC2-207ENST00000439673 CCDC70Q6NSX1 233 aa19.87■□□□□ 0.77
TSC2-207ENST00000439673 ANO2Q9NQ90 1003 aa19.87■□□□□ 0.77
TSC2-207ENST00000439673 IFIT2P09913 472 aaKnown RBP19.87■□□□□ 0.77
TSC2-207ENST00000439673 FAM43AQ8N2R8 423 aa19.87■□□□□ 0.77
TSC2-207ENST00000439673 MINK1Q8N4C8 1332 aaPredicted RBP19.86■□□□□ 0.77
TSC2-207ENST00000439673 GTF2E1P29083 439 aaPredicted RBP19.86■□□□□ 0.77
TSC2-207ENST00000439673 CCAR2Q8N163 923 aaKnown RBP19.86■□□□□ 0.77
TSC2-207ENST00000439673 PTPRGP23470 1445 aa19.86■□□□□ 0.77
TSC2-207ENST00000439673 HSP90AB4PQ58FF6 505 aa19.85■□□□□ 0.77
TSC2-207ENST00000439673 TRIM29Q14134 588 aa19.85■□□□□ 0.77
TSC2-207ENST00000439673 CUX1P39880 1505 aa19.84■□□□□ 0.77
TSC2-207ENST00000439673 MRE11P49959 708 aa19.84■□□□□ 0.77
TSC2-207ENST00000439673 BICD2Q8TD16 824 aa19.84■□□□□ 0.77
TSC2-207ENST00000439673 NCBP3Q53F19 620 aaKnown RBP19.84■□□□□ 0.77
TSC2-207ENST00000439673 SMC3Q9UQE7 1217 aa19.84■□□□□ 0.77
TSC2-207ENST00000439673 LNPKQ9C0E8 428 aa19.83■□□□□ 0.77
TSC2-207ENST00000439673 CPLX1O14810 134 aa19.83■□□□□ 0.76
TSC2-207ENST00000439673 IPO7O95373 1038 aaKnown RBP19.83■□□□□ 0.76
TSC2-207ENST00000439673 DDX58O95786 925 aaKnown RBP19.83■□□□□ 0.76
TSC2-207ENST00000439673 ZNF592Q92610 1267 aa19.83■□□□□ 0.76
TSC2-207ENST00000439673 ANKRD20A12PQ8NF67 263 aa19.82■□□□□ 0.76
TSC2-207ENST00000439673 HOOK1Q9UJC3 728 aaKnown RBP19.82■□□□□ 0.76
TSC2-207ENST00000439673 SMARCA4P51532 1647 aa19.82■□□□□ 0.76
TSC2-207ENST00000439673 SETQ01105 290 aaPredicted RBP19.82■□□□□ 0.76
TSC2-207ENST00000439673 FKBP5Q13451 457 aaPredicted RBP19.82■□□□□ 0.76
TSC2-207ENST00000439673 G3V3G9 751 aa19.81■□□□□ 0.76
TSC2-207ENST00000439673 DCAF8Q5TAQ9 597 aa19.81■□□□□ 0.76
TSC2-207ENST00000439673 EIF2S2P20042 333 aaKnown RBP19.81■□□□□ 0.76
TSC2-207ENST00000439673 CDC45O75419 566 aa19.81■□□□□ 0.76
TSC2-207ENST00000439673 FAM13BQ9NYF5 915 aa19.8■□□□□ 0.76
TSC2-207ENST00000439673 CCDC9Q9Y3X0 531 aaKnown RBP19.8■□□□□ 0.76
TSC2-207ENST00000439673 G3BP1Q13283 466 aaKnown RBP eCLIP19.8■□□□□ 0.76
TSC2-207ENST00000439673 TTC5Q8N0Z6 440 aa19.8■□□□□ 0.76
TSC2-207ENST00000439673 ERC2O15083 957 aa19.8■□□□□ 0.76
TSC2-207ENST00000439673 ZNF771Q7L3S4 317 aaPredicted RBP19.8■□□□□ 0.76
TSC2-207ENST00000439673 VPS37CA5D8V6 355 aaPredicted RBP19.79■□□□□ 0.76
TSC2-207ENST00000439673 SASS6Q6UVJ0 657 aa19.79■□□□□ 0.76
TSC2-207ENST00000439673 CCDC47Q96A33 483 aaKnown RBP19.79■□□□□ 0.76
TSC2-207ENST00000439673 WASHC2AQ641Q2 1341 aa19.79■□□□□ 0.76
TSC2-207ENST00000439673 IGF1RP08069 1367 aa19.79■□□□□ 0.76
TSC2-207ENST00000439673 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
TSC2-207ENST00000439673 TRDNQ13061 729 aa19.78■□□□□ 0.76
TSC2-207ENST00000439673 HOMER1Q86YM7 354 aa19.78■□□□□ 0.76
TSC2-207ENST00000439673 PANK1Q8TE04 598 aa19.78■□□□□ 0.76
TSC2-207ENST00000439673 TEX35Q5T0J7 233 aa19.78■□□□□ 0.76
TSC2-207ENST00000439673 CCDC73Q6ZRK6 1079 aa19.77■□□□□ 0.75
TSC2-207ENST00000439673 VPS53Q5VIR6 699 aa19.76■□□□□ 0.75
TSC2-207ENST00000439673 LRRC9Q6ZRR7 1453 aa19.76■□□□□ 0.75
TSC2-207ENST00000439673 ADAMTS8Q9UP79 889 aa19.75■□□□□ 0.75
TSC2-207ENST00000439673 PDE4CQ08493 712 aa19.75■□□□□ 0.75
TSC2-207ENST00000439673 NASPP49321 788 aaPredicted RBP19.75■□□□□ 0.75
TSC2-207ENST00000439673 CCDC39Q9UFE4 941 aa19.74■□□□□ 0.75
TSC2-207ENST00000439673 ANKRD50Q9ULJ7 1429 aa19.74■□□□□ 0.75
TSC2-207ENST00000439673 MTERF4Q7Z6M4 381 aaKnown RBP19.74■□□□□ 0.75
TSC2-207ENST00000439673 TSPYL4Q9UJ04 414 aa19.74■□□□□ 0.75
TSC2-207ENST00000439673 KIF21BO75037 1637 aa19.73■□□□□ 0.75
TSC2-207ENST00000439673 AMOTL1Q8IY63 956 aa19.73■□□□□ 0.75
TSC2-207ENST00000439673 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.73■□□□□ 0.75
TSC2-207ENST00000439673 MBD3O95983 291 aa19.73■□□□□ 0.75
TSC2-207ENST00000439673 MAP7D2Q96T17 732 aa19.73■□□□□ 0.75
TSC2-207ENST00000439673 ARGLU1Q9NWB6 273 aaPredicted RBP19.72■□□□□ 0.75
TSC2-207ENST00000439673 APPP05067 770 aa19.72■□□□□ 0.75
TSC2-207ENST00000439673 PDE3AQ14432 1141 aa19.72■□□□□ 0.75
TSC2-207ENST00000439673 TRAK2O60296 914 aa19.72■□□□□ 0.75
TSC2-207ENST00000439673 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.71■□□□□ 0.75
TSC2-207ENST00000439673 IFT57Q9NWB7 429 aa19.71■□□□□ 0.75
TSC2-207ENST00000439673 NECTIN2Q92692 538 aa19.71■□□□□ 0.75
TSC2-207ENST00000439673 PCMTD1Q96MG8 357 aaPredicted RBP19.7■□□□□ 0.74
TSC2-207ENST00000439673 MCM2P49736 904 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms