RNA–Protein interactions for RNA: ENST00000439649.7

GFRA1-204, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GFRA1, Length 9,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-204ENST00000439649 TRDNQ13061 729 aa14.86□□□□□ -0.03
GFRA1-204ENST00000439649 SAFBQ15424 915 aaKnown RBP eCLIP14.86□□□□□ -0.03
GFRA1-204ENST00000439649 TOMM22Q9NS69 142 aa14.86□□□□□ -0.03
GFRA1-204ENST00000439649 PDCP20941 246 aa14.86□□□□□ -0.03
GFRA1-204ENST00000439649 ZKSCAN2Q63HK3 967 aa14.86□□□□□ -0.03
GFRA1-204ENST00000439649 CCDC73Q6ZRK6 1079 aa14.86□□□□□ -0.03
GFRA1-204ENST00000439649 SENP3-EIF4A1A0A087X0R7 540 aa14.85□□□□□ -0.03
GFRA1-204ENST00000439649 CAVIN1Q6NZI2 390 aaKnown RBP14.85□□□□□ -0.03
GFRA1-204ENST00000439649 CCDC43Q96MW1 224 aaKnown RBP14.85□□□□□ -0.03
GFRA1-204ENST00000439649 ZNF592Q92610 1267 aa14.85□□□□□ -0.03
GFRA1-204ENST00000439649 NINLQ9Y2I6 1382 aa14.85□□□□□ -0.03
GFRA1-204ENST00000439649 SCAPERQ9BY12 1400 aa14.85□□□□□ -0.03
GFRA1-204ENST00000439649 SASS6Q6UVJ0 657 aa14.85□□□□□ -0.03
GFRA1-204ENST00000439649 PIP4K2AP48426 406 aaPredicted RBP14.84□□□□□ -0.03
GFRA1-204ENST00000439649 BRMS1Q9HCU9 246 aa14.84□□□□□ -0.03
GFRA1-204ENST00000439649 PCMTD1Q96MG8 357 aaPredicted RBP14.84□□□□□ -0.03
GFRA1-204ENST00000439649 LUC7LQ9NQ29 371 aaKnown RBP14.84□□□□□ -0.03
GFRA1-204ENST00000439649 EPS15P42566 896 aa14.84□□□□□ -0.03
GFRA1-204ENST00000439649 PDE4CQ08493 712 aa14.84□□□□□ -0.03
GFRA1-204ENST00000439649 PAK3O75914 559 aaPredicted RBP14.83□□□□□ -0.03
GFRA1-204ENST00000439649 TRIM34Q9BYJ4 488 aa14.83□□□□□ -0.03
GFRA1-204ENST00000439649 IFT57Q9NWB7 429 aa14.83□□□□□ -0.04
GFRA1-204ENST00000439649 ZNF330Q9Y3S2 320 aaPredicted RBP14.83□□□□□ -0.04
GFRA1-204ENST00000439649 MBD3O95983 291 aa14.83□□□□□ -0.04
GFRA1-204ENST00000439649 FAM13BQ9NYF5 915 aa14.83□□□□□ -0.04
GFRA1-204ENST00000439649 TOP2AP11388 1531 aaKnown RBP14.82□□□□□ -0.04
GFRA1-204ENST00000439649 GOLGA6L10A6NI86 522 aa14.82□□□□□ -0.04
GFRA1-204ENST00000439649 USP8P40818 1118 aa14.82□□□□□ -0.04
GFRA1-204ENST00000439649 SOX12O15370 315 aa14.82□□□□□ -0.04
GFRA1-204ENST00000439649 SLC4A10Q6U841 1118 aa14.82□□□□□ -0.04
GFRA1-204ENST00000439649 PATL2C9JE40 543 aaKnown RBP14.82□□□□□ -0.04
GFRA1-204ENST00000439649 IQCEQ6IPM2 695 aa14.82□□□□□ -0.04
GFRA1-204ENST00000439649 CHMP5Q9NZZ3 219 aa14.82□□□□□ -0.04
GFRA1-204ENST00000439649 NASPP49321 788 aaPredicted RBP14.82□□□□□ -0.04
GFRA1-204ENST00000439649 LEKR1Q6ZMV7 388 aa14.82□□□□□ -0.04
GFRA1-204ENST00000439649 EID1Q9Y6B2 187 aa14.82□□□□□ -0.04
GFRA1-204ENST00000439649 OLFM4Q6UX06 510 aa14.81□□□□□ -0.04
GFRA1-204ENST00000439649 BICD2Q8TD16 824 aa14.81□□□□□ -0.04
GFRA1-204ENST00000439649 ERC2O15083 957 aa14.81□□□□□ -0.04
GFRA1-204ENST00000439649 GTF2E1P29083 439 aaPredicted RBP14.81□□□□□ -0.04
GFRA1-204ENST00000439649 HSP90AB4PQ58FF6 505 aa14.81□□□□□ -0.04
GFRA1-204ENST00000439649 XBP1P17861 261 aa14.81□□□□□ -0.04
GFRA1-204ENST00000439649 TSHZ2Q9NRE2 1034 aa14.81□□□□□ -0.04
GFRA1-204ENST00000439649 INTS3Q68E01 1043 aaKnown RBP14.81□□□□□ -0.04
GFRA1-204ENST00000439649 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
GFRA1-204ENST00000439649 ERICH2A1L162 156 aa14.81□□□□□ -0.04
GFRA1-204ENST00000439649 ERLIN2O94905 339 aa14.8□□□□□ -0.04
GFRA1-204ENST00000439649 PDE4AP27815 886 aa14.8□□□□□ -0.04
GFRA1-204ENST00000439649 GON4LQ3T8J9 2241 aa14.8□□□□□ -0.04
GFRA1-204ENST00000439649 MIA2Q96PC5 1412 aa14.8□□□□□ -0.04
GFRA1-204ENST00000439649 ANKRD18AQ8IVF6 992 aa14.8□□□□□ -0.04
GFRA1-204ENST00000439649 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.8□□□□□ -0.04
GFRA1-204ENST00000439649 PDIA4P13667 645 aaKnown RBP14.8□□□□□ -0.04
GFRA1-204ENST00000439649 MRE11P49959 708 aa14.79□□□□□ -0.04
GFRA1-204ENST00000439649 APPP05067 770 aa14.79□□□□□ -0.04
GFRA1-204ENST00000439649 MCM2P49736 904 aa14.79□□□□□ -0.04
GFRA1-204ENST00000439649 MPHOSPH9Q99550 1183 aa14.79□□□□□ -0.04
GFRA1-204ENST00000439649 NOL8Q76FK4 1167 aaKnown RBP14.79□□□□□ -0.04
GFRA1-204ENST00000439649 RRP1P56182 461 aaKnown RBP14.78□□□□□ -0.04
GFRA1-204ENST00000439649 KRI1Q8N9T8 703 aaKnown RBP14.78□□□□□ -0.04
GFRA1-204ENST00000439649 AMPHP49418 695 aa14.78□□□□□ -0.04
GFRA1-204ENST00000439649 SMARCE1Q969G3 411 aa14.78□□□□□ -0.04
GFRA1-204ENST00000439649 C9orf78Q9NZ63 289 aaPredicted RBP14.78□□□□□ -0.04
GFRA1-204ENST00000439649 WASHC2AQ641Q2 1341 aa14.78□□□□□ -0.04
GFRA1-204ENST00000439649 EVC2Q86UK5 1308 aa14.77□□□□□ -0.04
GFRA1-204ENST00000439649 RILPL2Q969X0 211 aa14.77□□□□□ -0.04
GFRA1-204ENST00000439649 OFD1O75665 1012 aa14.77□□□□□ -0.05
GFRA1-204ENST00000439649 SAFB2Q14151 953 aaKnown RBP eCLIP14.77□□□□□ -0.05
GFRA1-204ENST00000439649 ANKRD45Q5TZF3 282 aa14.77□□□□□ -0.05
GFRA1-204ENST00000439649 PDS5BQ9NTI5 1447 aa14.77□□□□□ -0.05
GFRA1-204ENST00000439649 DHX16O60231 1041 aaKnown RBP14.77□□□□□ -0.05
GFRA1-204ENST00000439649 NAP1L1P55209 391 aaKnown RBP14.77□□□□□ -0.05
GFRA1-204ENST00000439649 USP47Q96K76 1375 aa14.76□□□□□ -0.05
GFRA1-204ENST00000439649 DDX58O95786 925 aaKnown RBP14.76□□□□□ -0.05
GFRA1-204ENST00000439649 PSMA5P28066 241 aa14.76□□□□□ -0.05
GFRA1-204ENST00000439649 EFCAB2Q5VUJ9 269 aa14.76□□□□□ -0.05
GFRA1-204ENST00000439649 RABEP1Q15276 862 aa14.76□□□□□ -0.05
GFRA1-204ENST00000439649 KINO60870 393 aaKnown RBP14.76□□□□□ -0.05
GFRA1-204ENST00000439649 KIAA0754O94854 1291 aa14.76□□□□□ -0.05
GFRA1-204ENST00000439649 C1orf141Q5JVX7 400 aa14.76□□□□□ -0.05
GFRA1-204ENST00000439649 CTDP1Q9Y5B0 961 aaPredicted RBP14.75□□□□□ -0.05
GFRA1-204ENST00000439649 EZRP15311 586 aaKnown RBP14.75□□□□□ -0.05
GFRA1-204ENST00000439649 SMC3Q9UQE7 1217 aa14.74□□□□□ -0.05
GFRA1-204ENST00000439649 VPS37DQ86XT2 251 aa14.74□□□□□ -0.05
GFRA1-204ENST00000439649 R3HCC1Q9Y3T6 440 aaKnown RBP14.74□□□□□ -0.05
GFRA1-204ENST00000439649 EIF3JO75822 258 aaKnown RBP14.74□□□□□ -0.05
GFRA1-204ENST00000439649 IFIT2P09913 472 aaKnown RBP14.74□□□□□ -0.05
GFRA1-204ENST00000439649 API5Q9BZZ5 524 aaKnown RBP14.74□□□□□ -0.05
GFRA1-204ENST00000439649 JMYQ8N9B5 988 aa14.74□□□□□ -0.05
GFRA1-204ENST00000439649 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.74□□□□□ -0.05
GFRA1-204ENST00000439649 STK26Q9P289 416 aa14.74□□□□□ -0.05
GFRA1-204ENST00000439649 WIZO95785 1651 aa14.74□□□□□ -0.05
GFRA1-204ENST00000439649 RALYLQ86SE5 291 aaKnown RBP14.73□□□□□ -0.05
GFRA1-204ENST00000439649 TXLNAP40222 546 aa14.73□□□□□ -0.05
GFRA1-204ENST00000439649 TTC5Q8N0Z6 440 aa14.73□□□□□ -0.05
GFRA1-204ENST00000439649 SART3Q15020 963 aaKnown RBP14.73□□□□□ -0.05
GFRA1-204ENST00000439649 ANO2Q9NQ90 1003 aa14.73□□□□□ -0.05
GFRA1-204ENST00000439649 CNKSR2Q8WXI2 1034 aa14.73□□□□□ -0.05
GFRA1-204ENST00000439649 ERLIN1O75477 346 aa14.72□□□□□ -0.05
GFRA1-204ENST00000439649 HIP1O00291 1037 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms