RNA–Protein interactions for RNA: ENST00000439526.6

FMR1-207, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 3,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-207ENST00000439526 SLC52A1Q9NWF4 448 aa25.08■■□□□ 1.61
FMR1-207ENST00000439526 PRAM1Q96QH2 718 aa25.07■■□□□ 1.6
FMR1-207ENST00000439526 ADAMTS8Q9UP79 889 aa25.06■■□□□ 1.6
FMR1-207ENST00000439526 ARAP3Q8WWN8 1544 aa25.06■■□□□ 1.6
FMR1-207ENST00000439526 PER1O15534 1290 aaPredicted RBP25.06■■□□□ 1.6
FMR1-207ENST00000439526 CDCA7LQ96GN5 454 aa25.05■■□□□ 1.6
FMR1-207ENST00000439526 PRDM15P57071 1507 aaPredicted RBP25.04■■□□□ 1.6
FMR1-207ENST00000439526 SCAF11Q99590 1463 aaKnown RBP25.04■■□□□ 1.6
FMR1-207ENST00000439526 PPP2R1AP30153 589 aa25.04■■□□□ 1.6
FMR1-207ENST00000439526 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.03■■□□□ 1.6
FMR1-207ENST00000439526 NUDCQ9Y266 331 aa25.03■■□□□ 1.6
FMR1-207ENST00000439526 CCDC136Q96JN2 1154 aa25.02■■□□□ 1.6
FMR1-207ENST00000439526 C14orf93Q9H972 538 aaKnown RBP25.02■■□□□ 1.6
FMR1-207ENST00000439526 SOX12O15370 315 aa25.02■■□□□ 1.6
FMR1-207ENST00000439526 NEO1Q92859 1461 aa25.01■■□□□ 1.59
FMR1-207ENST00000439526 U2SURPO15042 1029 aaKnown RBP25.01■■□□□ 1.59
FMR1-207ENST00000439526 E9PCH4 1651 aa25.01■■□□□ 1.59
FMR1-207ENST00000439526 EVC2Q86UK5 1308 aa25.01■■□□□ 1.59
FMR1-207ENST00000439526 SLC24A1O60721 1099 aa25■■□□□ 1.59
FMR1-207ENST00000439526 WAPLQ7Z5K2 1190 aa25■■□□□ 1.59
FMR1-207ENST00000439526 MLH3Q9UHC1 1453 aa25■■□□□ 1.59
FMR1-207ENST00000439526 BRD4O60885 1362 aaPredicted RBP25■■□□□ 1.59
FMR1-207ENST00000439526 GPRASP1Q5JY77 1395 aa25■■□□□ 1.59
FMR1-207ENST00000439526 RRP7AQ9Y3A4 280 aaKnown RBP24.99■■□□□ 1.59
FMR1-207ENST00000439526 PTPRTO14522 1441 aa24.99■■□□□ 1.59
FMR1-207ENST00000439526 GGNBP2Q9H3C7 697 aa24.98■■□□□ 1.59
FMR1-207ENST00000439526 CLTCL1P53675 1640 aa24.97■■□□□ 1.59
FMR1-207ENST00000439526 TXNDC2Q86VQ3 553 aa24.97■■□□□ 1.59
FMR1-207ENST00000439526 KIDINS220Q9ULH0 1771 aa24.96■■□□□ 1.59
FMR1-207ENST00000439526 TRPM2O94759 1503 aa24.96■■□□□ 1.59
FMR1-207ENST00000439526 RIMBP3CA6NJZ7 1639 aa24.96■■□□□ 1.59
FMR1-207ENST00000439526 RIMBP3BA6NNM3 1639 aa24.96■■□□□ 1.59
FMR1-207ENST00000439526 RIMBP3Q9UFD9 1639 aa24.96■■□□□ 1.59
FMR1-207ENST00000439526 PLIN1O60240 522 aa24.95■■□□□ 1.58
FMR1-207ENST00000439526 INO80Q9ULG1 1556 aaPredicted RBP24.95■■□□□ 1.58
FMR1-207ENST00000439526 HECW2Q9P2P5 1572 aa24.95■■□□□ 1.58
FMR1-207ENST00000439526 RPGRIP1LQ68CZ1 1315 aa24.94■■□□□ 1.58
FMR1-207ENST00000439526 APAF1O14727 1248 aa24.94■■□□□ 1.58
FMR1-207ENST00000439526 MAGI2Q86UL8 1455 aa24.94■■□□□ 1.58
FMR1-207ENST00000439526 SLC26A8Q96RN1 970 aa24.93■■□□□ 1.58
FMR1-207ENST00000439526 COL17A1Q9UMD9 1497 aaPredicted RBP24.93■■□□□ 1.58
FMR1-207ENST00000439526 CARD14Q9BXL6 1004 aa24.92■■□□□ 1.58
FMR1-207ENST00000439526 CANXP27824 592 aaKnown RBP24.91■■□□□ 1.58
FMR1-207ENST00000439526 AMER1Q5JTC6 1135 aaPredicted RBP24.91■■□□□ 1.58
FMR1-207ENST00000439526 U2AF1L5P0DN76 240 aaPredicted RBP24.91■■□□□ 1.58
FMR1-207ENST00000439526 U2AF1Q01081 240 aaKnown RBP eCLIP24.91■■□□□ 1.58
FMR1-207ENST00000439526 RCAN3Q9UKA8 241 aa24.91■■□□□ 1.58
FMR1-207ENST00000439526 CFAP53Q96M91 514 aa24.9■■□□□ 1.58
FMR1-207ENST00000439526 PPP4R2Q9NY27 417 aa24.9■■□□□ 1.58
FMR1-207ENST00000439526 TET3O43151 1660 aa24.89■■□□□ 1.57
FMR1-207ENST00000439526 TRPM1Q7Z4N2 1603 aa24.87■■□□□ 1.57
FMR1-207ENST00000439526 EIF2AK4Q9P2K8 1649 aaKnown RBP24.87■■□□□ 1.57
FMR1-207ENST00000439526 CEP152O94986 1710 aa24.87■■□□□ 1.57
FMR1-207ENST00000439526 MTHFSP49914 203 aa24.87■■□□□ 1.57
FMR1-207ENST00000439526 HDGFP51858 240 aaKnown RBP24.87■■□□□ 1.57
FMR1-207ENST00000439526 HDGFL2Q7Z4V5 671 aaPredicted RBP24.87■■□□□ 1.57
FMR1-207ENST00000439526 CABP1Q9NZU7 370 aa24.87■■□□□ 1.57
FMR1-207ENST00000439526 EFCAB6Q5THR3 1501 aa24.86■■□□□ 1.57
FMR1-207ENST00000439526 CGNL1Q0VF96 1302 aa24.86■■□□□ 1.57
FMR1-207ENST00000439526 CDK19Q9BWU1 502 aa24.85■■□□□ 1.57
FMR1-207ENST00000439526 NSD3Q9BZ95 1437 aa24.85■■□□□ 1.57
FMR1-207ENST00000439526 SPHKAPQ2M3C7 1700 aa24.85■■□□□ 1.57
FMR1-207ENST00000439526 TERF2IPQ9NYB0 399 aa24.84■■□□□ 1.57
FMR1-207ENST00000439526 PARD3Q8TEW0 1356 aa24.84■■□□□ 1.57
FMR1-207ENST00000439526 C14orf37Q86TY3 774 aa24.84■■□□□ 1.57
FMR1-207ENST00000439526 FBLN1P23142 703 aa24.83■■□□□ 1.57
FMR1-207ENST00000439526 CFAP74Q9C0B2 1584 aa24.83■■□□□ 1.57
FMR1-207ENST00000439526 TSHZ2Q9NRE2 1034 aa24.83■■□□□ 1.57
FMR1-207ENST00000439526 ABCC3O15438 1527 aa24.83■■□□□ 1.56
FMR1-207ENST00000439526 ABCA6Q8N139 1617 aa24.82■■□□□ 1.56
FMR1-207ENST00000439526 PPRC1Q5VV67 1664 aaKnown RBP24.82■■□□□ 1.56
FMR1-207ENST00000439526 EID1Q9Y6B2 187 aa24.8■■□□□ 1.56
FMR1-207ENST00000439526 RNF17Q9BXT8 1623 aaKnown RBP24.79■■□□□ 1.56
FMR1-207ENST00000439526 NEFMP07197 916 aa24.78■■□□□ 1.56
FMR1-207ENST00000439526 BCL11AQ9H165 835 aa24.77■■□□□ 1.56
FMR1-207ENST00000439526 ZMYM3Q14202 1370 aa24.77■■□□□ 1.56
FMR1-207ENST00000439526 GOLGA2Q08379 1002 aa24.77■■□□□ 1.56
FMR1-207ENST00000439526 ZBTB7CA1YPR0 619 aa24.76■■□□□ 1.55
FMR1-207ENST00000439526 FRAT1Q92837 279 aaPredicted RBP24.76■■□□□ 1.55
FMR1-207ENST00000439526 EXOC6Q8TAG9 804 aa24.76■■□□□ 1.55
FMR1-207ENST00000439526 RBM33Q96EV2 1170 aaKnown RBP24.76■■□□□ 1.55
FMR1-207ENST00000439526 LAS1LQ9Y4W2 734 aaKnown RBP24.76■■□□□ 1.55
FMR1-207ENST00000439526 FRMPD1Q5SYB0 1578 aa24.75■■□□□ 1.55
FMR1-207ENST00000439526 NCKAP5LQ9HCH0 1330 aa24.75■■□□□ 1.55
FMR1-207ENST00000439526 DIP2CQ9Y2E4 1556 aa24.74■■□□□ 1.55
FMR1-207ENST00000439526 KIF1BO60333 1816 aa24.73■■□□□ 1.55
FMR1-207ENST00000439526 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.72■■□□□ 1.55
FMR1-207ENST00000439526 MADDQ8WXG6 1647 aa24.72■■□□□ 1.55
FMR1-207ENST00000439526 MROH1Q8NDA8 1641 aa24.72■■□□□ 1.55
FMR1-207ENST00000439526 BCL2L13Q9BXK5 485 aa24.71■■□□□ 1.55
FMR1-207ENST00000439526 MAPK8IP3Q9UPT6 1336 aa24.7■■□□□ 1.55
FMR1-207ENST00000439526 RRP1P56182 461 aaKnown RBP24.7■■□□□ 1.54
FMR1-207ENST00000439526 ERICH6Q7L0X2 663 aa24.7■■□□□ 1.54
FMR1-207ENST00000439526 PDE3BQ13370 1112 aa24.68■■□□□ 1.54
FMR1-207ENST00000439526 PMFBP1Q8TBY8 1022 aa24.67■■□□□ 1.54
FMR1-207ENST00000439526 ERVK-7P63135 1459 aa24.67■■□□□ 1.54
FMR1-207ENST00000439526 PIK3C2GO75747 1445 aa24.67■■□□□ 1.54
FMR1-207ENST00000439526 RIMS2Q9UQ26 1411 aa24.67■■□□□ 1.54
FMR1-207ENST00000439526 NPM2Q86SE8 214 aaKnown RBP24.66■■□□□ 1.54
FMR1-207ENST00000439526 LMOD2Q6P5Q4 547 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms