RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 RALGAPBQ86X10 1494 aa12.79□□□□□ -0.36
CDC42SE1-202ENST00000439374 PRAG1Q86YV5 1406 aa12.79□□□□□ -0.36
CDC42SE1-202ENST00000439374 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.79□□□□□ -0.36
CDC42SE1-202ENST00000439374 COG6Q9Y2V7 657 aa12.78□□□□□ -0.36
CDC42SE1-202ENST00000439374 ABCC10Q5T3U5 1492 aa12.78□□□□□ -0.36
CDC42SE1-202ENST00000439374 MBD5Q9P267 1494 aa12.78□□□□□ -0.36
CDC42SE1-202ENST00000439374 U2AF1L5P0DN76 240 aaPredicted RBP12.78□□□□□ -0.36
CDC42SE1-202ENST00000439374 U2AF1Q01081 240 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDC42SE1-202ENST00000439374 PDE3BQ13370 1112 aa12.78□□□□□ -0.36
CDC42SE1-202ENST00000439374 SEC24BO95487 1268 aa12.77□□□□□ -0.37
CDC42SE1-202ENST00000439374 FAM161AQ3B820 660 aa12.76□□□□□ -0.37
CDC42SE1-202ENST00000439374 PANK1Q8TE04 598 aa12.76□□□□□ -0.37
CDC42SE1-202ENST00000439374 PANK2Q9BZ23 570 aa12.76□□□□□ -0.37
CDC42SE1-202ENST00000439374 ADGRL2O95490 1459 aa12.76□□□□□ -0.37
CDC42SE1-202ENST00000439374 CABP2Q9NPB3 220 aa12.76□□□□□ -0.37
CDC42SE1-202ENST00000439374 ERCC6L2Q5T890 1561 aa12.76□□□□□ -0.37
CDC42SE1-202ENST00000439374 ITSN2Q9NZM3 1697 aa12.75□□□□□ -0.37
CDC42SE1-202ENST00000439374 PLEKHG5O94827 1062 aa12.75□□□□□ -0.37
CDC42SE1-202ENST00000439374 UBE2Q2Q8WVN8 375 aa12.75□□□□□ -0.37
CDC42SE1-202ENST00000439374 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
CDC42SE1-202ENST00000439374 A2MP01023 1474 aa12.75□□□□□ -0.37
CDC42SE1-202ENST00000439374 CYB5RLQ6IPT4 315 aa12.74□□□□□ -0.37
CDC42SE1-202ENST00000439374 RRAGDQ9NQL2 400 aaPredicted RBP12.74□□□□□ -0.37
CDC42SE1-202ENST00000439374 CHD1O14646 1710 aa12.74□□□□□ -0.37
CDC42SE1-202ENST00000439374 SOX12O15370 315 aa12.74□□□□□ -0.37
CDC42SE1-202ENST00000439374 MINK1Q8N4C8 1332 aaPredicted RBP12.73□□□□□ -0.37
CDC42SE1-202ENST00000439374 PNNQ9H307 717 aaKnown RBP12.73□□□□□ -0.37
CDC42SE1-202ENST00000439374 PLA2R1Q13018 1463 aa12.73□□□□□ -0.37
CDC42SE1-202ENST00000439374 MFAP1P55081 439 aaKnown RBP12.72□□□□□ -0.37
CDC42SE1-202ENST00000439374 AMER1Q5JTC6 1135 aaPredicted RBP12.72□□□□□ -0.37
CDC42SE1-202ENST00000439374 PKNOX2Q96KN3 472 aa12.72□□□□□ -0.37
CDC42SE1-202ENST00000439374 DMRT2Q9Y5R5 561 aa12.72□□□□□ -0.37
CDC42SE1-202ENST00000439374 NUTM2FA1L443 756 aa12.72□□□□□ -0.37
CDC42SE1-202ENST00000439374 MS4A1P11836 297 aa12.72□□□□□ -0.37
CDC42SE1-202ENST00000439374 GGNBP2Q9H3C7 697 aa12.72□□□□□ -0.37
CDC42SE1-202ENST00000439374 UHRF1BP1Q6BDS2 1440 aa12.71□□□□□ -0.37
CDC42SE1-202ENST00000439374 PARD3Q8TEW0 1356 aa12.71□□□□□ -0.37
CDC42SE1-202ENST00000439374 HSP90AA1P07900 732 aaKnown RBP12.71□□□□□ -0.37
CDC42SE1-202ENST00000439374 MTHFSP49914 203 aa12.71□□□□□ -0.37
CDC42SE1-202ENST00000439374 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.71□□□□□ -0.37
CDC42SE1-202ENST00000439374 FBLN1P23142 703 aa12.71□□□□□ -0.38
CDC42SE1-202ENST00000439374 CARD14Q9BXL6 1004 aa12.71□□□□□ -0.38
CDC42SE1-202ENST00000439374 ABCA8O94911 1581 aa12.7□□□□□ -0.38
CDC42SE1-202ENST00000439374 CENPJQ9HC77 1338 aaPredicted RBP12.7□□□□□ -0.38
CDC42SE1-202ENST00000439374 KDM5CP41229 1560 aa12.7□□□□□ -0.38
CDC42SE1-202ENST00000439374 PLEKHH1Q9ULM0 1364 aa12.7□□□□□ -0.38
CDC42SE1-202ENST00000439374 UPF2Q9HAU5 1272 aaKnown RBP12.7□□□□□ -0.38
CDC42SE1-202ENST00000439374 SAMD9LQ8IVG5 1584 aa12.69□□□□□ -0.38
CDC42SE1-202ENST00000439374 C8orf34Q49A92 452 aa12.69□□□□□ -0.38
CDC42SE1-202ENST00000439374 DUSP27Q5VZP5 1158 aa12.69□□□□□ -0.38
CDC42SE1-202ENST00000439374 LRPPRCP42704 1394 aaKnown RBP12.69□□□□□ -0.38
CDC42SE1-202ENST00000439374 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
CDC42SE1-202ENST00000439374 CFAP53Q96M91 514 aa12.69□□□□□ -0.38
CDC42SE1-202ENST00000439374 TNNQ9UQP3 1299 aa12.69□□□□□ -0.38
CDC42SE1-202ENST00000439374 ARHGEF12Q9NZN5 1544 aa12.69□□□□□ -0.38
CDC42SE1-202ENST00000439374 CDC42BPAQ5VT25 1732 aa12.68□□□□□ -0.38
CDC42SE1-202ENST00000439374 ELL2O00472 640 aaPredicted RBP12.68□□□□□ -0.38
CDC42SE1-202ENST00000439374 IGHDP01880 384 aa12.68□□□□□ -0.38
CDC42SE1-202ENST00000439374 BECN1Q14457 450 aa12.68□□□□□ -0.38
CDC42SE1-202ENST00000439374 TCP11L2Q8N4U5 519 aa12.68□□□□□ -0.38
CDC42SE1-202ENST00000439374 NCLP19338 710 aaKnown RBP12.67□□□□□ -0.38
CDC42SE1-202ENST00000439374 PLCH2O75038 1416 aa12.67□□□□□ -0.38
CDC42SE1-202ENST00000439374 EIF3AQ14152 1382 aaKnown RBP12.67□□□□□ -0.38
CDC42SE1-202ENST00000439374 CENPQQ7L2Z9 268 aaPredicted RBP12.67□□□□□ -0.38
CDC42SE1-202ENST00000439374 HSP90AA2PQ14568 343 aaPredicted RBP12.67□□□□□ -0.38
CDC42SE1-202ENST00000439374 FTSJ3Q8IY81 847 aaKnown RBP12.67□□□□□ -0.38
CDC42SE1-202ENST00000439374 RSPH6AQ9H0K4 717 aa12.67□□□□□ -0.38
CDC42SE1-202ENST00000439374 RNF123Q5XPI4 1314 aa12.66□□□□□ -0.38
CDC42SE1-202ENST00000439374 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.66□□□□□ -0.384e-7■■□□□ 13.5
CDC42SE1-202ENST00000439374 TTC37Q6PGP7 1564 aa12.66□□□□□ -0.38
CDC42SE1-202ENST00000439374 TSR2Q969E8 191 aaKnown RBP12.66□□□□□ -0.38
CDC42SE1-202ENST00000439374 CFAP65Q6ZU64 1925 aaKnown RBP12.66□□□□□ -0.38
CDC42SE1-202ENST00000439374 SHANK2Q9UPX8 1470 aa12.66□□□□□ -0.38
CDC42SE1-202ENST00000439374 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
CDC42SE1-202ENST00000439374 GOLGA6L3A6NEY3 463 aa12.65□□□□□ -0.38
CDC42SE1-202ENST00000439374 SLFN5Q08AF3 891 aa12.65□□□□□ -0.38
CDC42SE1-202ENST00000439374 GLIPR1L2Q4G1C9 344 aa12.64□□□□□ -0.39
CDC42SE1-202ENST00000439374 ADGBQ8N7X0 1667 aa12.64□□□□□ -0.39
CDC42SE1-202ENST00000439374 TRIM44Q96DX7 344 aaPredicted RBP12.64□□□□□ -0.39
CDC42SE1-202ENST00000439374 ZMYND15Q9H091 742 aa12.64□□□□□ -0.39
CDC42SE1-202ENST00000439374 ESF1Q9H501 851 aaKnown RBP12.63□□□□□ -0.39
CDC42SE1-202ENST00000439374 MAPK8IP3Q9UPT6 1336 aa12.63□□□□□ -0.39
CDC42SE1-202ENST00000439374 E9PSI1 815 aa12.63□□□□□ -0.39
CDC42SE1-202ENST00000439374 FANCAO15360 1455 aa12.63□□□□□ -0.39
CDC42SE1-202ENST00000439374 RBM10P98175 930 aaKnown RBP12.63□□□□□ -0.39
CDC42SE1-202ENST00000439374 FBXO31Q5XUX0 539 aaPredicted RBP12.63□□□□□ -0.39
CDC42SE1-202ENST00000439374 MAGI2Q86UL8 1455 aa12.62□□□□□ -0.39
CDC42SE1-202ENST00000439374 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
CDC42SE1-202ENST00000439374 MPNDQ8N594 471 aa12.61□□□□□ -0.39
CDC42SE1-202ENST00000439374 ADGRL1O94910 1474 aa12.61□□□□□ -0.39
CDC42SE1-202ENST00000439374 NOS1P29475 1434 aa12.61□□□□□ -0.39
CDC42SE1-202ENST00000439374 UGGT1Q9NYU2 1555 aa12.61□□□□□ -0.39
CDC42SE1-202ENST00000439374 FAM43AQ8N2R8 423 aa12.61□□□□□ -0.39
CDC42SE1-202ENST00000439374 COL17A1Q9UMD9 1497 aaPredicted RBP12.61□□□□□ -0.39
CDC42SE1-202ENST00000439374 FOXD4L5Q5VV16 416 aaPredicted RBP12.61□□□□□ -0.39
CDC42SE1-202ENST00000439374 FOXD4L4Q8WXT5 416 aaPredicted RBP12.61□□□□□ -0.39
CDC42SE1-202ENST00000439374 SMC4Q9NTJ3 1288 aa12.61□□□□□ -0.39
CDC42SE1-202ENST00000439374 HMOX1P09601 288 aa12.6□□□□□ -0.39
CDC42SE1-202ENST00000439374 ITPRIPQ8IWB1 547 aa12.6□□□□□ -0.39
CDC42SE1-202ENST00000439374 NSD3Q9BZ95 1437 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms