RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 ADGRF5Q8IZF2 1346 aa20.74■□□□□ 0.91
LINC00163-202ENST00000439088 TESK2Q96S53 571 aa20.74■□□□□ 0.91
LINC00163-202ENST00000439088 PRKRIP1Q9H875 184 aaPredicted RBP20.72■□□□□ 0.91
LINC00163-202ENST00000439088 SCAF11Q99590 1463 aaKnown RBP20.71■□□□□ 0.91
LINC00163-202ENST00000439088 IQGAP1P46940 1657 aa20.71■□□□□ 0.91
LINC00163-202ENST00000439088 IDI1Q13907 227 aa20.7■□□□□ 0.9
LINC00163-202ENST00000439088 CFAP70Q5T0N1 1121 aa20.69■□□□□ 0.9
LINC00163-202ENST00000439088 PREX1Q8TCU6 1659 aa20.69■□□□□ 0.9
LINC00163-202ENST00000439088 PPLO60437 1756 aa20.69■□□□□ 0.9
LINC00163-202ENST00000439088 TMF1P82094 1093 aa20.68■□□□□ 0.9
LINC00163-202ENST00000439088 DNAJC5Q9H3Z4 198 aa20.68■□□□□ 0.9
LINC00163-202ENST00000439088 EIF3AQ14152 1382 aaKnown RBP20.65■□□□□ 0.9
LINC00163-202ENST00000439088 DISP3Q9P2K9 1392 aa20.65■□□□□ 0.9
LINC00163-202ENST00000439088 FBXO31Q5XUX0 539 aaPredicted RBP20.65■□□□□ 0.9
LINC00163-202ENST00000439088 ERVK-7P63135 1459 aa20.64■□□□□ 0.89
LINC00163-202ENST00000439088 PIK3C2GO75747 1445 aa20.64■□□□□ 0.89
LINC00163-202ENST00000439088 VGFO15240 615 aaPredicted RBP20.64■□□□□ 0.89
LINC00163-202ENST00000439088 C14orf93Q9H972 538 aaKnown RBP20.64■□□□□ 0.89
LINC00163-202ENST00000439088 CLTCQ00610 1675 aaKnown RBP20.64■□□□□ 0.89
LINC00163-202ENST00000439088 MLECQ14165 292 aa20.63■□□□□ 0.89
LINC00163-202ENST00000439088 SETBP1Q9Y6X0 1596 aa20.62■□□□□ 0.89
LINC00163-202ENST00000439088 SCAF1Q9H7N4 1312 aaKnown RBP20.62■□□□□ 0.89
LINC00163-202ENST00000439088 SLC24A1O60721 1099 aa20.62■□□□□ 0.89
LINC00163-202ENST00000439088 NEXMIFQ5QGS0 1516 aa20.61■□□□□ 0.89
LINC00163-202ENST00000439088 ZFYVE9O95405 1425 aa20.6■□□□□ 0.89
LINC00163-202ENST00000439088 TMEM131LA2VDJ0 1609 aa20.6■□□□□ 0.89
LINC00163-202ENST00000439088 CDCA8Q53HL2 280 aa20.59■□□□□ 0.89
LINC00163-202ENST00000439088 ESF1Q9H501 851 aaKnown RBP20.59■□□□□ 0.89
LINC00163-202ENST00000439088 SPATA31D1Q6ZQQ2 1576 aa20.57■□□□□ 0.88
LINC00163-202ENST00000439088 TRHP20396 242 aaPredicted RBP20.56■□□□□ 0.88
LINC00163-202ENST00000439088 ZMYM3Q14202 1370 aa20.55■□□□□ 0.88
LINC00163-202ENST00000439088 KTN1Q86UP2 1357 aaKnown RBP20.55■□□□□ 0.88
LINC00163-202ENST00000439088 CCDC184Q52MB2 194 aa20.55■□□□□ 0.88
LINC00163-202ENST00000439088 PER1O15534 1290 aaPredicted RBP20.54■□□□□ 0.88
LINC00163-202ENST00000439088 ADGRB1O14514 1584 aa20.54■□□□□ 0.88
LINC00163-202ENST00000439088 MYO5BQ9ULV0 1848 aa20.54■□□□□ 0.88
LINC00163-202ENST00000439088 NUTM2DQ5VT03 806 aaPredicted RBP20.53■□□□□ 0.88
LINC00163-202ENST00000439088 MRS2Q9HD23 443 aa20.53■□□□□ 0.88
LINC00163-202ENST00000439088 GTF3C3Q9Y5Q9 886 aa20.53■□□□□ 0.88
LINC00163-202ENST00000439088 MYO3AQ8NEV4 1616 aa20.52■□□□□ 0.88
LINC00163-202ENST00000439088 RALBP1Q15311 655 aa20.52■□□□□ 0.88
LINC00163-202ENST00000439088 STAG3Q9UJ98 1225 aa20.52■□□□□ 0.88
LINC00163-202ENST00000439088 PANK3Q9H999 370 aa20.51■□□□□ 0.87
LINC00163-202ENST00000439088 SBNO2Q9Y2G9 1366 aa20.51■□□□□ 0.87
LINC00163-202ENST00000439088 TMEM132EQ6IEE7 984 aa20.5■□□□□ 0.87
LINC00163-202ENST00000439088 CENPJQ9HC77 1338 aaPredicted RBP20.49■□□□□ 0.87
LINC00163-202ENST00000439088 TRAK1Q9UPV9 953 aa20.48■□□□□ 0.87
LINC00163-202ENST00000439088 CNGB1Q14028 1251 aaPredicted RBP20.47■□□□□ 0.87
LINC00163-202ENST00000439088 A2ML1A8K2U0 1454 aa20.47■□□□□ 0.87
LINC00163-202ENST00000439088 MYBBP1AQ9BQG0 1328 aaKnown RBP20.44■□□□□ 0.86
LINC00163-202ENST00000439088 KDM5AP29375 1690 aaKnown RBP20.44■□□□□ 0.86
LINC00163-202ENST00000439088 PARD3Q8TEW0 1356 aa20.44■□□□□ 0.86
LINC00163-202ENST00000439088 FAM9BQ8IZU0 186 aa20.43■□□□□ 0.86
LINC00163-202ENST00000439088 TNRQ92752 1358 aa20.42■□□□□ 0.86
LINC00163-202ENST00000439088 HNRNPUQ00839 825 aaKnown RBP eCLIP20.42■□□□□ 0.86
LINC00163-202ENST00000439088 RIMS2Q9UQ26 1411 aa20.41■□□□□ 0.86
LINC00163-202ENST00000439088 BRD4O60885 1362 aaPredicted RBP20.41■□□□□ 0.86
LINC00163-202ENST00000439088 TMC1Q8TDI8 760 aa20.4■□□□□ 0.86
LINC00163-202ENST00000439088 QRICH2Q9H0J4 1663 aa20.4■□□□□ 0.86
LINC00163-202ENST00000439088 KNSTRNQ9Y448 316 aa20.39■□□□□ 0.86
LINC00163-202ENST00000439088 MYOM1P52179 1685 aa20.39■□□□□ 0.86
LINC00163-202ENST00000439088 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.39■□□□□ 0.85
LINC00163-202ENST00000439088 ASXL1Q8IXJ9 1541 aa20.38■□□□□ 0.85
LINC00163-202ENST00000439088 ALKQ9UM73 1620 aa20.38■□□□□ 0.85
LINC00163-202ENST00000439088 ARHGEF28Q8N1W1 1705 aaKnown RBP20.38■□□□□ 0.85
LINC00163-202ENST00000439088 HDGFP51858 240 aaKnown RBP20.37■□□□□ 0.85
LINC00163-202ENST00000439088 PUS7Q96PZ0 661 aaKnown RBP20.37■□□□□ 0.85
LINC00163-202ENST00000439088 CC2D1BQ5T0F9 858 aaKnown RBP20.36■□□□□ 0.85
LINC00163-202ENST00000439088 NLRP13Q86W25 1043 aa20.36■□□□□ 0.85
LINC00163-202ENST00000439088 PNISRQ8TF01 805 aaKnown RBP20.36■□□□□ 0.85
LINC00163-202ENST00000439088 YTHDC2Q9H6S0 1430 aaKnown RBP20.35■□□□□ 0.85
LINC00163-202ENST00000439088 AMER1Q5JTC6 1135 aaPredicted RBP20.34■□□□□ 0.85
LINC00163-202ENST00000439088 STK26Q9P289 416 aa20.34■□□□□ 0.85
LINC00163-202ENST00000439088 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
LINC00163-202ENST00000439088 EVC2Q86UK5 1308 aa20.33■□□□□ 0.84
LINC00163-202ENST00000439088 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.84
LINC00163-202ENST00000439088 NLRP1Q9C000 1473 aa20.31■□□□□ 0.84
LINC00163-202ENST00000439088 PTPRMP28827 1452 aa20.3■□□□□ 0.84
LINC00163-202ENST00000439088 CEBPAP49715 358 aaPredicted RBP20.3■□□□□ 0.84
LINC00163-202ENST00000439088 UBR1Q8IWV7 1749 aa20.3■□□□□ 0.84
LINC00163-202ENST00000439088 TMEM2Q9UHN6 1383 aa20.29■□□□□ 0.84
LINC00163-202ENST00000439088 LRPPRCP42704 1394 aaKnown RBP20.29■□□□□ 0.84
LINC00163-202ENST00000439088 C3P01024 1663 aa20.28■□□□□ 0.84
LINC00163-202ENST00000439088 ZBED9Q6R2W3 1325 aa20.28■□□□□ 0.84
LINC00163-202ENST00000439088 FER1L4A9Z1Z3 1794 aa20.28■□□□□ 0.84
LINC00163-202ENST00000439088 PRAM1Q96QH2 718 aa20.27■□□□□ 0.84
LINC00163-202ENST00000439088 CARD14Q9BXL6 1004 aa20.27■□□□□ 0.84
LINC00163-202ENST00000439088 POGKQ9P215 609 aa20.27■□□□□ 0.84
LINC00163-202ENST00000439088 TULP4Q9NRJ4 1543 aa20.27■□□□□ 0.84
LINC00163-202ENST00000439088 SETD1AO15047 1707 aaKnown RBP20.27■□□□□ 0.83
LINC00163-202ENST00000439088 NRXN3Q9Y4C0 1643 aa20.25■□□□□ 0.83
LINC00163-202ENST00000439088 DLC1Q96QB1 1528 aa20.25■□□□□ 0.83
LINC00163-202ENST00000439088 SAFB2Q14151 953 aaKnown RBP eCLIP20.25■□□□□ 0.83
LINC00163-202ENST00000439088 SLC12A5Q9H2X9 1139 aa20.25■□□□□ 0.83
LINC00163-202ENST00000439088 ABCC11Q96J66 1382 aa20.25■□□□□ 0.83
LINC00163-202ENST00000439088 PPP2R1AP30153 589 aa20.23■□□□□ 0.83
LINC00163-202ENST00000439088 CABP2Q9NPB3 220 aa20.21■□□□□ 0.83
LINC00163-202ENST00000439088 MINK1Q8N4C8 1332 aaPredicted RBP20.2■□□□□ 0.82
LINC00163-202ENST00000439088 METP08581 1390 aa20.2■□□□□ 0.82
LINC00163-202ENST00000439088 NINLQ9Y2I6 1382 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms