RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 ABCA6Q8N139 1617 aa17.07■□□□□ 0.32
HCG18-236ENST00000438412 SCAF11Q99590 1463 aaKnown RBP17.07■□□□□ 0.32
HCG18-236ENST00000438412 NOS1P29475 1434 aa17.05■□□□□ 0.32
HCG18-236ENST00000438412 NPATQ14207 1427 aa17.05■□□□□ 0.32
HCG18-236ENST00000438412 TMEM132EQ6IEE7 984 aa17.05■□□□□ 0.32
HCG18-236ENST00000438412 CYB5RLQ6IPT4 315 aa17.05■□□□□ 0.32
HCG18-236ENST00000438412 KIF1BO60333 1816 aa17.04■□□□□ 0.32
HCG18-236ENST00000438412 KNSTRNQ9Y448 316 aa17.04■□□□□ 0.32
HCG18-236ENST00000438412 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
HCG18-236ENST00000438412 MAP3K4Q9Y6R4 1608 aa17.03■□□□□ 0.32
HCG18-236ENST00000438412 WASHC2CQ9Y4E1 1318 aa17.02■□□□□ 0.32
HCG18-236ENST00000438412 MYOM1P52179 1685 aa17.02■□□□□ 0.32
HCG18-236ENST00000438412 ADAMTS8Q9UP79 889 aa17.02■□□□□ 0.32
HCG18-236ENST00000438412 TRAK1Q9UPV9 953 aa17.02■□□□□ 0.32
HCG18-236ENST00000438412 PPP2R1AP30153 589 aa17.01■□□□□ 0.31
HCG18-236ENST00000438412 HECW2Q9P2P5 1572 aa17■□□□□ 0.31
HCG18-236ENST00000438412 RNF123Q5XPI4 1314 aa16.99■□□□□ 0.31
HCG18-236ENST00000438412 IFT172Q9UG01 1749 aa16.99■□□□□ 0.31
HCG18-236ENST00000438412 ERVK-7P63135 1459 aa16.98■□□□□ 0.31
HCG18-236ENST00000438412 PLIN1O60240 522 aa16.98■□□□□ 0.31
HCG18-236ENST00000438412 SIGLEC1Q9BZZ2 1709 aa16.98■□□□□ 0.31
HCG18-236ENST00000438412 CARD14Q9BXL6 1004 aa16.98■□□□□ 0.31
HCG18-236ENST00000438412 YEATS2Q9ULM3 1422 aa16.97■□□□□ 0.31
HCG18-236ENST00000438412 MLH3Q9UHC1 1453 aa16.97■□□□□ 0.31
HCG18-236ENST00000438412 CCDC146Q8IYE0 955 aa16.96■□□□□ 0.31
HCG18-236ENST00000438412 ERICH6BQ5W0A0 696 aa16.96■□□□□ 0.3
HCG18-236ENST00000438412 ADGRB3O60242 1522 aa16.95■□□□□ 0.3
HCG18-236ENST00000438412 SYNMO15061 1565 aa16.95■□□□□ 0.3
HCG18-236ENST00000438412 MYOM2P54296 1465 aa16.95■□□□□ 0.3
HCG18-236ENST00000438412 EXOC6Q8TAG9 804 aa16.95■□□□□ 0.3
HCG18-236ENST00000438412 ABCC3O15438 1527 aa16.95■□□□□ 0.3
HCG18-236ENST00000438412 EIF3AQ14152 1382 aaKnown RBP16.95■□□□□ 0.3
HCG18-236ENST00000438412 MSH5O43196 834 aa16.95■□□□□ 0.3
HCG18-236ENST00000438412 SAFB2Q14151 953 aaKnown RBP eCLIP16.95■□□□□ 0.31e-6■■■□□ 15.2
HCG18-236ENST00000438412 CCDC136Q96JN2 1154 aa16.95■□□□□ 0.3
HCG18-236ENST00000438412 RCAN3Q9UKA8 241 aa16.95■□□□□ 0.3
HCG18-236ENST00000438412 LMTK2Q8IWU2 1503 aa16.94■□□□□ 0.3
HCG18-236ENST00000438412 TNNT2P45379 298 aaPredicted RBP16.94■□□□□ 0.3
HCG18-236ENST00000438412 BLMP54132 1417 aaPredicted RBP16.94■□□□□ 0.3
HCG18-236ENST00000438412 KDM5AP29375 1690 aaKnown RBP16.94■□□□□ 0.3
HCG18-236ENST00000438412 RRP1P56182 461 aaKnown RBP16.94■□□□□ 0.3
HCG18-236ENST00000438412 KIAA1210Q9ULL0 1709 aa16.92■□□□□ 0.3
HCG18-236ENST00000438412 ASXL1Q8IXJ9 1541 aa16.92■□□□□ 0.3
HCG18-236ENST00000438412 PLEKHH1Q9ULM0 1364 aa16.92■□□□□ 0.3
HCG18-236ENST00000438412 CFAP74Q9C0B2 1584 aa16.92■□□□□ 0.3
HCG18-236ENST00000438412 DIP2CQ9Y2E4 1556 aa16.92■□□□□ 0.3
HCG18-236ENST00000438412 SLC12A5Q9H2X9 1139 aa16.91■□□□□ 0.3
HCG18-236ENST00000438412 NRXN1Q9ULB1 1477 aa16.91■□□□□ 0.3
HCG18-236ENST00000438412 PPLO60437 1756 aa16.9■□□□□ 0.3
HCG18-236ENST00000438412 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
HCG18-236ENST00000438412 PIK3C2GO75747 1445 aa16.9■□□□□ 0.3
HCG18-236ENST00000438412 CAMSAP1Q5T5Y3 1602 aa16.9■□□□□ 0.3
HCG18-236ENST00000438412 CENPJQ9HC77 1338 aaPredicted RBP16.9■□□□□ 0.3
HCG18-236ENST00000438412 WDR43Q15061 677 aaKnown RBP eCLIP16.89■□□□□ 0.29
HCG18-236ENST00000438412 SKAP1Q86WV1 359 aa16.89■□□□□ 0.29
HCG18-236ENST00000438412 IDI1Q13907 227 aa16.89■□□□□ 0.29
HCG18-236ENST00000438412 STAC3Q96MF2 364 aa16.89■□□□□ 0.29
HCG18-236ENST00000438412 FBXO31Q5XUX0 539 aaPredicted RBP16.88■□□□□ 0.29
HCG18-236ENST00000438412 TSPOAP1O95153 1857 aa16.88■□□□□ 0.29
HCG18-236ENST00000438412 RICTORQ6R327 1708 aa16.88■□□□□ 0.29
HCG18-236ENST00000438412 C14orf93Q9H972 538 aaKnown RBP16.88■□□□□ 0.29
HCG18-236ENST00000438412 STK26Q9P289 416 aa16.87■□□□□ 0.29
HCG18-236ENST00000438412 NEURL4Q96JN8 1562 aa16.87■□□□□ 0.29
HCG18-236ENST00000438412 ADGRB1O14514 1584 aa16.87■□□□□ 0.29
HCG18-236ENST00000438412 FAM69CQ0P6D2 419 aa16.87■□□□□ 0.29
HCG18-236ENST00000438412 C20orf194Q5TEA3 1177 aa16.87■□□□□ 0.29
HCG18-236ENST00000438412 NEO1Q92859 1461 aa16.86■□□□□ 0.29
HCG18-236ENST00000438412 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
HCG18-236ENST00000438412 MYO5BQ9ULV0 1848 aa16.85■□□□□ 0.29
HCG18-236ENST00000438412 QRICH2Q9H0J4 1663 aa16.85■□□□□ 0.29
HCG18-236ENST00000438412 DMRT2Q9Y5R5 561 aa16.85■□□□□ 0.29
HCG18-236ENST00000438412 ZMYM4Q5VZL5 1548 aa16.84■□□□□ 0.29
HCG18-236ENST00000438412 NSD3Q9BZ95 1437 aa16.84■□□□□ 0.29
HCG18-236ENST00000438412 APAF1O14727 1248 aa16.83■□□□□ 0.28
HCG18-236ENST00000438412 CABP2Q9NPB3 220 aa16.82■□□□□ 0.28
HCG18-236ENST00000438412 PDE3BQ13370 1112 aa16.82■□□□□ 0.28
HCG18-236ENST00000438412 MLECQ14165 292 aa16.82■□□□□ 0.28
HCG18-236ENST00000438412 MYO3AQ8NEV4 1616 aa16.81■□□□□ 0.28
HCG18-236ENST00000438412 NEXMIFQ5QGS0 1516 aa16.81■□□□□ 0.28
HCG18-236ENST00000438412 GLI2P10070 1586 aa16.8■□□□□ 0.28
HCG18-236ENST00000438412 CRBNQ96SW2 442 aa16.8■□□□□ 0.28
HCG18-236ENST00000438412 ANP32EQ9BTT0 268 aa16.8■□□□□ 0.28
HCG18-236ENST00000438412 ZC3H13Q5T200 1668 aaKnown RBP16.8■□□□□ 0.28
HCG18-236ENST00000438412 DUSP27Q5VZP5 1158 aa16.8■□□□□ 0.28
HCG18-236ENST00000438412 PIK3C2BO00750 1634 aa16.79■□□□□ 0.28
HCG18-236ENST00000438412 SETBP1Q9Y6X0 1596 aa16.79■□□□□ 0.28
HCG18-236ENST00000438412 RIMBP3CA6NJZ7 1639 aa16.79■□□□□ 0.28
HCG18-236ENST00000438412 RIMBP3BA6NNM3 1639 aa16.79■□□□□ 0.28
HCG18-236ENST00000438412 RIMBP3Q9UFD9 1639 aa16.79■□□□□ 0.28
HCG18-236ENST00000438412 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
HCG18-236ENST00000438412 RRP7AQ9Y3A4 280 aaKnown RBP16.78■□□□□ 0.28
HCG18-236ENST00000438412 ZNF521Q96K83 1311 aa16.78■□□□□ 0.28
HCG18-236ENST00000438412 TULP4Q9NRJ4 1543 aa16.77■□□□□ 0.27
HCG18-236ENST00000438412 MORC1Q86VD1 984 aa16.76■□□□□ 0.27
HCG18-236ENST00000438412 ARHGEF28Q8N1W1 1705 aaKnown RBP16.76■□□□□ 0.27
HCG18-236ENST00000438412 NPC1L1Q9UHC9 1359 aa16.76■□□□□ 0.27
HCG18-236ENST00000438412 SBNO2Q9Y2G9 1366 aa16.76■□□□□ 0.27
HCG18-236ENST00000438412 MINK1Q8N4C8 1332 aaPredicted RBP16.75■□□□□ 0.27
HCG18-236ENST00000438412 VGFO15240 615 aaPredicted RBP16.75■□□□□ 0.27
HCG18-236ENST00000438412 GOLGA2Q08379 1002 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms