RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 KNSTRNQ9Y448 316 aa25.52■■□□□ 1.68
FAM239A-202ENST00000438107 MYOM1P52179 1685 aa25.51■■□□□ 1.68
FAM239A-202ENST00000438107 ZBTB47Q9UFB7 747 aaPredicted RBP25.51■■□□□ 1.67
FAM239A-202ENST00000438107 ASXL1Q8IXJ9 1541 aa25.51■■□□□ 1.67
FAM239A-202ENST00000438107 NPC1L1Q9UHC9 1359 aa25.5■■□□□ 1.67
FAM239A-202ENST00000438107 INO80Q9ULG1 1556 aaPredicted RBP25.49■■□□□ 1.67
FAM239A-202ENST00000438107 PPP2R1AP30153 589 aa25.49■■□□□ 1.67
FAM239A-202ENST00000438107 PIK3C2GO75747 1445 aa25.48■■□□□ 1.67
FAM239A-202ENST00000438107 AMER1Q5JTC6 1135 aaPredicted RBP25.48■■□□□ 1.67
FAM239A-202ENST00000438107 ADAMTS8Q9UP79 889 aa25.48■■□□□ 1.67
FAM239A-202ENST00000438107 KDM5AP29375 1690 aaKnown RBP25.47■■□□□ 1.67
FAM239A-202ENST00000438107 EIF3AQ14152 1382 aaKnown RBP25.47■■□□□ 1.67
FAM239A-202ENST00000438107 ABCA9Q8IUA7 1624 aa25.46■■□□□ 1.67
FAM239A-202ENST00000438107 AFAP1Q8N556 730 aa25.46■■□□□ 1.67
FAM239A-202ENST00000438107 ATP7AQ04656 1500 aa25.46■■□□□ 1.67
FAM239A-202ENST00000438107 PDE4AP27815 886 aa25.45■■□□□ 1.67
FAM239A-202ENST00000438107 KANK1Q14678 1352 aa25.44■■□□□ 1.66
FAM239A-202ENST00000438107 WDR43Q15061 677 aaKnown RBP eCLIP25.44■■□□□ 1.66
FAM239A-202ENST00000438107 BACH2Q9BYV9 841 aa25.44■■□□□ 1.66
FAM239A-202ENST00000438107 SLC24A1O60721 1099 aa25.43■■□□□ 1.66
FAM239A-202ENST00000438107 OSCARQ8IYS5 282 aa25.42■■□□□ 1.66
FAM239A-202ENST00000438107 CRBNQ96SW2 442 aa25.42■■□□□ 1.66
FAM239A-202ENST00000438107 PLIN1O60240 522 aa25.41■■□□□ 1.66
FAM239A-202ENST00000438107 MYOM2P54296 1465 aa25.41■■□□□ 1.66
FAM239A-202ENST00000438107 ZNF521Q96K83 1311 aa25.41■■□□□ 1.66
FAM239A-202ENST00000438107 MAP3K4Q9Y6R4 1608 aa25.41■■□□□ 1.66
FAM239A-202ENST00000438107 FANCAO15360 1455 aa25.4■■□□□ 1.66
FAM239A-202ENST00000438107 PLEKHH1Q9ULM0 1364 aa25.4■■□□□ 1.66
FAM239A-202ENST00000438107 DEKP35659 375 aaKnown RBP25.39■■□□□ 1.66
FAM239A-202ENST00000438107 KIF1BO60333 1816 aa25.39■■□□□ 1.65
FAM239A-202ENST00000438107 IFT172Q9UG01 1749 aa25.38■■□□□ 1.65
FAM239A-202ENST00000438107 DUSP27Q5VZP5 1158 aa25.38■■□□□ 1.65
FAM239A-202ENST00000438107 MROH1Q8NDA8 1641 aa25.37■■□□□ 1.65
FAM239A-202ENST00000438107 NBR1Q14596 966 aa25.36■■□□□ 1.65
FAM239A-202ENST00000438107 ABCA6Q8N139 1617 aa25.36■■□□□ 1.65
FAM239A-202ENST00000438107 GOLGA2Q08379 1002 aa25.35■■□□□ 1.65
FAM239A-202ENST00000438107 MYO3AQ8NEV4 1616 aa25.34■■□□□ 1.65
FAM239A-202ENST00000438107 ASXL2Q76L83 1435 aa25.32■■□□□ 1.64
FAM239A-202ENST00000438107 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.32■■□□□ 1.64
FAM239A-202ENST00000438107 KDM2BQ8NHM5 1336 aa25.32■■□□□ 1.64
FAM239A-202ENST00000438107 ADGRL1O94910 1474 aa25.32■■□□□ 1.64
FAM239A-202ENST00000438107 ERVK-7P63135 1459 aa25.31■■□□□ 1.64
FAM239A-202ENST00000438107 EFCAB6Q5THR3 1501 aa25.3■■□□□ 1.64
FAM239A-202ENST00000438107 SLFN5Q08AF3 891 aa25.29■■□□□ 1.64
FAM239A-202ENST00000438107 RTL5Q5HYW3 569 aaPredicted RBP25.29■■□□□ 1.64
FAM239A-202ENST00000438107 NPM2Q86SE8 214 aaKnown RBP25.29■■□□□ 1.64
FAM239A-202ENST00000438107 TRMT2AQ8IZ69 625 aaKnown RBP25.29■■□□□ 1.64
FAM239A-202ENST00000438107 C20orf194Q5TEA3 1177 aa25.28■■□□□ 1.64
FAM239A-202ENST00000438107 CENPQQ7L2Z9 268 aaPredicted RBP25.28■■□□□ 1.64
FAM239A-202ENST00000438107 NGEFQ8N5V2 710 aa25.28■■□□□ 1.64
FAM239A-202ENST00000438107 NRXN1Q9ULB1 1477 aa25.28■■□□□ 1.64
FAM239A-202ENST00000438107 KIF3BO15066 747 aa25.27■■□□□ 1.64
FAM239A-202ENST00000438107 SBNO2Q9Y2G9 1366 aa25.27■■□□□ 1.64
FAM239A-202ENST00000438107 LMTK2Q8IWU2 1503 aa25.27■■□□□ 1.64
FAM239A-202ENST00000438107 MROH2AA6NES4 1674 aa25.26■■□□□ 1.63
FAM239A-202ENST00000438107 SETBP1Q9Y6X0 1596 aa25.25■■□□□ 1.63
FAM239A-202ENST00000438107 UGGT1Q9NYU2 1555 aa25.24■■□□□ 1.63
FAM239A-202ENST00000438107 PPRC1Q5VV67 1664 aaKnown RBP25.23■■□□□ 1.63
FAM239A-202ENST00000438107 KIDINS220Q9ULH0 1771 aa25.23■■□□□ 1.63
FAM239A-202ENST00000438107 DDRGK1Q96HY6 314 aa25.23■■□□□ 1.63
FAM239A-202ENST00000438107 NKTRP30414 1462 aaKnown RBP25.23■■□□□ 1.63
FAM239A-202ENST00000438107 CFAP70Q5T0N1 1121 aa25.22■■□□□ 1.63
FAM239A-202ENST00000438107 NPM1P06748 294 aaKnown RBP eCLIP25.21■■□□□ 1.63
FAM239A-202ENST00000438107 ADGRF5Q8IZF2 1346 aa25.2■■□□□ 1.62
FAM239A-202ENST00000438107 ADGRB3O60242 1522 aa25.19■■□□□ 1.62
FAM239A-202ENST00000438107 USP35Q9P2H5 1018 aa25.19■■□□□ 1.62
FAM239A-202ENST00000438107 ZC3H13Q5T200 1668 aaKnown RBP25.18■■□□□ 1.62
FAM239A-202ENST00000438107 E9PSI1 815 aa25.17■■□□□ 1.62
FAM239A-202ENST00000438107 POLR3AO14802 1390 aaPredicted RBP25.17■■□□□ 1.62
FAM239A-202ENST00000438107 APAF1O14727 1248 aa25.15■■□□□ 1.62
FAM239A-202ENST00000438107 PPM1GO15355 546 aaPredicted RBP25.15■■□□□ 1.62
FAM239A-202ENST00000438107 CCDC146Q8IYE0 955 aa25.15■■□□□ 1.62
FAM239A-202ENST00000438107 CARD14Q9BXL6 1004 aa25.15■■□□□ 1.62
FAM239A-202ENST00000438107 PPLO60437 1756 aa25.15■■□□□ 1.62
FAM239A-202ENST00000438107 ZNF518AQ6AHZ1 1483 aa25.15■■□□□ 1.62
FAM239A-202ENST00000438107 SKAP1Q86WV1 359 aa25.12■■□□□ 1.61
FAM239A-202ENST00000438107 USP32Q8NFA0 1604 aa25.11■■□□□ 1.61
FAM239A-202ENST00000438107 QRICH2Q9H0J4 1663 aa25.11■■□□□ 1.61
FAM239A-202ENST00000438107 NINLQ9Y2I6 1382 aa25.11■■□□□ 1.61
FAM239A-202ENST00000438107 SHPRHQ149N8 1683 aa25.11■■□□□ 1.61
FAM239A-202ENST00000438107 FAM161AQ3B820 660 aa25.11■■□□□ 1.61
FAM239A-202ENST00000438107 CENPJQ9HC77 1338 aaPredicted RBP25.1■■□□□ 1.61
FAM239A-202ENST00000438107 SPINK5Q9NQ38 1064 aaPredicted RBP25.1■■□□□ 1.61
FAM239A-202ENST00000438107 NOS1P29475 1434 aa25.09■■□□□ 1.61
FAM239A-202ENST00000438107 CFAP74Q9C0B2 1584 aa25.09■■□□□ 1.61
FAM239A-202ENST00000438107 VIRMAQ69YN4 1812 aaKnown RBP25.07■■□□□ 1.6
FAM239A-202ENST00000438107 ADGRB1O14514 1584 aa25.06■■□□□ 1.6
FAM239A-202ENST00000438107 CD109Q6YHK3 1445 aa25.06■■□□□ 1.6
FAM239A-202ENST00000438107 C8orf34Q49A92 452 aa25.05■■□□□ 1.6
FAM239A-202ENST00000438107 PDE3AQ14432 1141 aa25.05■■□□□ 1.6
FAM239A-202ENST00000438107 LAS1LQ9Y4W2 734 aaKnown RBP25.05■■□□□ 1.6
FAM239A-202ENST00000438107 NEFMP07197 916 aa25.04■■□□□ 1.6
FAM239A-202ENST00000438107 POGZQ7Z3K3 1410 aa25.03■■□□□ 1.6
FAM239A-202ENST00000438107 NSD3Q9BZ95 1437 aa25.03■■□□□ 1.6
FAM239A-202ENST00000438107 CGNL1Q0VF96 1302 aa25.03■■□□□ 1.6
FAM239A-202ENST00000438107 C14orf93Q9H972 538 aaKnown RBP25.03■■□□□ 1.6
FAM239A-202ENST00000438107 BCAR3O75815 825 aa25.03■■□□□ 1.6
FAM239A-202ENST00000438107 RPGRIP1LQ68CZ1 1315 aa25.02■■□□□ 1.6
FAM239A-202ENST00000438107 MLH3Q9UHC1 1453 aa25.02■■□□□ 1.6
FAM239A-202ENST00000438107 NPATQ14207 1427 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms