RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 NUTM2AQ8IVF1 878 aaPredicted RBP19.99■□□□□ 0.79
SMAD9-IT1-201ENST00000437983 NKTRP30414 1462 aaKnown RBP19.99■□□□□ 0.79
SMAD9-IT1-201ENST00000437983 EHBP1L1Q8N3D4 1523 aa19.98■□□□□ 0.79
SMAD9-IT1-201ENST00000437983 STAG3Q9UJ98 1225 aa19.98■□□□□ 0.79
SMAD9-IT1-201ENST00000437983 NWD1Q149M9 1564 aa19.98■□□□□ 0.79
SMAD9-IT1-201ENST00000437983 RGS12O14924 1447 aa19.97■□□□□ 0.79
SMAD9-IT1-201ENST00000437983 AFF2P51816 1311 aa19.97■□□□□ 0.79
SMAD9-IT1-201ENST00000437983 ARHGEF5Q12774 1597 aa19.95■□□□□ 0.78
SMAD9-IT1-201ENST00000437983 SHPRHQ149N8 1683 aa19.95■□□□□ 0.78
SMAD9-IT1-201ENST00000437983 EIF2AK4Q9P2K8 1649 aaKnown RBP19.94■□□□□ 0.78
SMAD9-IT1-201ENST00000437983 IDI1Q13907 227 aa19.93■□□□□ 0.78
SMAD9-IT1-201ENST00000437983 NUTM2DQ5VT03 806 aaPredicted RBP19.93■□□□□ 0.78
SMAD9-IT1-201ENST00000437983 ARHGAP31Q2M1Z3 1444 aa19.93■□□□□ 0.78
SMAD9-IT1-201ENST00000437983 EFCAB6Q5THR3 1501 aa19.92■□□□□ 0.78
SMAD9-IT1-201ENST00000437983 SETBP1Q9Y6X0 1596 aa19.92■□□□□ 0.78
SMAD9-IT1-201ENST00000437983 KDM5AP29375 1690 aaKnown RBP19.92■□□□□ 0.78
SMAD9-IT1-201ENST00000437983 BCANQ96GW7 911 aa19.92■□□□□ 0.78
SMAD9-IT1-201ENST00000437983 AHDC1Q5TGY3 1603 aaPredicted RBP19.91■□□□□ 0.78
SMAD9-IT1-201ENST00000437983 QTRT2Q9H974 415 aaKnown RBP19.89■□□□□ 0.77
SMAD9-IT1-201ENST00000437983 ZRANB1Q9UGI0 708 aa19.89■□□□□ 0.77
SMAD9-IT1-201ENST00000437983 DIP2AQ14689 1571 aa19.88■□□□□ 0.77
SMAD9-IT1-201ENST00000437983 RBM6P78332 1123 aaKnown RBP19.88■□□□□ 0.77
SMAD9-IT1-201ENST00000437983 MAST1Q9Y2H9 1570 aa19.87■□□□□ 0.77
SMAD9-IT1-201ENST00000437983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.86■□□□□ 0.77
SMAD9-IT1-201ENST00000437983 C14orf37Q86TY3 774 aa19.85■□□□□ 0.77
SMAD9-IT1-201ENST00000437983 C8orf37Q96NL8 207 aa19.85■□□□□ 0.77
SMAD9-IT1-201ENST00000437983 CHD2O14647 1828 aaKnown RBP19.84■□□□□ 0.77
SMAD9-IT1-201ENST00000437983 BRINP3Q76B58 766 aa19.84■□□□□ 0.77
SMAD9-IT1-201ENST00000437983 CADPS2Q86UW7 1296 aa19.82■□□□□ 0.76
SMAD9-IT1-201ENST00000437983 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.82■□□□□ 0.76
SMAD9-IT1-201ENST00000437983 DUOX2Q9NRD8 1548 aa19.81■□□□□ 0.76
SMAD9-IT1-201ENST00000437983 ATAD2Q6PL18 1390 aa19.81■□□□□ 0.76
SMAD9-IT1-201ENST00000437983 ATF3P18847 181 aa19.8■□□□□ 0.76
SMAD9-IT1-201ENST00000437983 C19orf44Q9H6X5 657 aa19.8■□□□□ 0.76
SMAD9-IT1-201ENST00000437983 NCOA3Q9Y6Q9 1424 aa19.79■□□□□ 0.76
SMAD9-IT1-201ENST00000437983 HOXD11P31277 338 aaPredicted RBP19.79■□□□□ 0.76
SMAD9-IT1-201ENST00000437983 ADGRB3O60242 1522 aa19.78■□□□□ 0.76
SMAD9-IT1-201ENST00000437983 PLEKHG1Q9ULL1 1385 aa19.77■□□□□ 0.76
SMAD9-IT1-201ENST00000437983 SETD5Q9C0A6 1442 aa19.76■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 RRP7BPQ9NSQ0 103 aa19.75■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 ZFYVE9O95405 1425 aa19.75■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 KIF15Q9NS87 1388 aa19.74■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 DDX17Q92841 729 aaKnown RBP19.74■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 NGLY1Q96IV0 654 aa19.74■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 TBX22Q9Y458 520 aa19.74■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 NOS1P29475 1434 aa19.74■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 ASXL1Q8IXJ9 1541 aa19.72■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 PPP1R15AO75807 674 aaPredicted RBP19.72■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 ADAMTS2O95450 1211 aa19.72■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 EP400Q96L91 3159 aa19.71■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 ERBINQ96RT1 1412 aa19.71■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 RIMS2Q9UQ26 1411 aa19.71■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 LRRC59Q96AG4 307 aaKnown RBP19.71■□□□□ 0.75
SMAD9-IT1-201ENST00000437983 KANK1Q14678 1352 aa19.7■□□□□ 0.74
SMAD9-IT1-201ENST00000437983 PNPLA6Q8IY17 1366 aa19.7■□□□□ 0.74
SMAD9-IT1-201ENST00000437983 SLC52A1Q9NWF4 448 aa19.69■□□□□ 0.74
SMAD9-IT1-201ENST00000437983 LMTK2Q8IWU2 1503 aa19.69■□□□□ 0.74
SMAD9-IT1-201ENST00000437983 ADAMTS13Q76LX8 1427 aa19.68■□□□□ 0.74
SMAD9-IT1-201ENST00000437983 MYO5BQ9ULV0 1848 aa19.68■□□□□ 0.74
SMAD9-IT1-201ENST00000437983 NHSL1Q5SYE7 1610 aa19.67■□□□□ 0.74
SMAD9-IT1-201ENST00000437983 USP21Q9UK80 565 aa19.66■□□□□ 0.74
SMAD9-IT1-201ENST00000437983 AMOTL2Q9Y2J4 779 aa19.65■□□□□ 0.74
SMAD9-IT1-201ENST00000437983 MST1RQ04912 1400 aa19.65■□□□□ 0.74
SMAD9-IT1-201ENST00000437983 TRPC5Q9UL62 973 aaPredicted RBP19.64■□□□□ 0.73
SMAD9-IT1-201ENST00000437983 MYOM3Q5VTT5 1437 aa19.64■□□□□ 0.73
SMAD9-IT1-201ENST00000437983 PTPRUQ92729 1446 aa19.64■□□□□ 0.73
SMAD9-IT1-201ENST00000437983 CCDC125Q86Z20 511 aa19.63■□□□□ 0.73
SMAD9-IT1-201ENST00000437983 ABCC5O15440 1437 aa19.62■□□□□ 0.73
SMAD9-IT1-201ENST00000437983 HDGFP51858 240 aaKnown RBP19.62■□□□□ 0.73
SMAD9-IT1-201ENST00000437983 GCC2Q8IWJ2 1684 aa19.61■□□□□ 0.73
SMAD9-IT1-201ENST00000437983 TMEM131LA2VDJ0 1609 aa19.6■□□□□ 0.73
SMAD9-IT1-201ENST00000437983 ATRNO75882 1429 aa19.59■□□□□ 0.73
SMAD9-IT1-201ENST00000437983 DCCP43146 1447 aa19.59■□□□□ 0.73
SMAD9-IT1-201ENST00000437983 PIK3R4Q99570 1358 aa19.59■□□□□ 0.73
SMAD9-IT1-201ENST00000437983 CHGAP10645 457 aaKnown RBP19.58■□□□□ 0.72
SMAD9-IT1-201ENST00000437983 DEFB132Q7Z7B7 95 aa19.58■□□□□ 0.72
SMAD9-IT1-201ENST00000437983 FNBP4Q8N3X1 1017 aaPredicted RBP19.58■□□□□ 0.72
SMAD9-IT1-201ENST00000437983 SLC4A2P04920 1241 aa19.57■□□□□ 0.72
SMAD9-IT1-201ENST00000437983 KANK4Q5T7N3 995 aaPredicted RBP19.57■□□□□ 0.72
SMAD9-IT1-201ENST00000437983 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.57■□□□□ 0.72
SMAD9-IT1-201ENST00000437983 CROCC2H7BZ55 1655 aa19.56■□□□□ 0.72
SMAD9-IT1-201ENST00000437983 LRP5O75197 1615 aa19.55■□□□□ 0.72
SMAD9-IT1-201ENST00000437983 CHIC2Q9UKJ5 165 aa19.55■□□□□ 0.72
SMAD9-IT1-201ENST00000437983 TRPM2O94759 1503 aa19.54■□□□□ 0.72
SMAD9-IT1-201ENST00000437983 DAPK1P53355 1430 aa19.51■□□□□ 0.71
SMAD9-IT1-201ENST00000437983 BLMP54132 1417 aaPredicted RBP19.51■□□□□ 0.71
SMAD9-IT1-201ENST00000437983 PTCH1Q13635 1447 aa19.5■□□□□ 0.71
SMAD9-IT1-201ENST00000437983 RPRD2Q5VT52 1461 aaKnown RBP19.49■□□□□ 0.71
SMAD9-IT1-201ENST00000437983 BCL9LQ86UU0 1499 aa19.49■□□□□ 0.71
SMAD9-IT1-201ENST00000437983 PSDA5PKW4 1024 aaPredicted RBP19.49■□□□□ 0.71
SMAD9-IT1-201ENST00000437983 XRN1Q8IZH2 1706 aaKnown RBP19.48■□□□□ 0.71
SMAD9-IT1-201ENST00000437983 GJD4Q96KN9 370 aaPredicted RBP19.48■□□□□ 0.71
SMAD9-IT1-201ENST00000437983 SOS2Q07890 1332 aaPredicted RBP19.48■□□□□ 0.71
SMAD9-IT1-201ENST00000437983 UNC13BO14795 1591 aa19.47■□□□□ 0.71
SMAD9-IT1-201ENST00000437983 ANKRD30AQ9BXX3 1397 aa19.46■□□□□ 0.71
SMAD9-IT1-201ENST00000437983 ORAI2Q96SN7 254 aa19.46■□□□□ 0.71
SMAD9-IT1-201ENST00000437983 C1orf167Q5SNV9 1468 aa19.46■□□□□ 0.71
SMAD9-IT1-201ENST00000437983 ADGRL3Q9HAR2 1447 aa19.45■□□□□ 0.7
SMAD9-IT1-201ENST00000437983 HRCP23327 699 aa19.45■□□□□ 0.7
SMAD9-IT1-201ENST00000437983 METP08581 1390 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms