RNA–Protein interactions for RNA: ENST00000436792.6

VPS8-207, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene VPS8, Length 5,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-207ENST00000436792 CABP4P57796 275 aa11.3□□□□□ -0.6
VPS8-207ENST00000436792 SLC3A2P08195 630 aaKnown RBP11.3□□□□□ -0.6
VPS8-207ENST00000436792 CD109Q6YHK3 1445 aa11.3□□□□□ -0.6
VPS8-207ENST00000436792 DDX54Q8TDD1 881 aaKnown RBP11.3□□□□□ -0.6
VPS8-207ENST00000436792 MYOM3Q5VTT5 1437 aa11.29□□□□□ -0.6
VPS8-207ENST00000436792 HIRIP3Q9BW71 556 aaPredicted RBP11.29□□□□□ -0.6
VPS8-207ENST00000436792 FGD5Q6ZNL6 1462 aa11.29□□□□□ -0.6
VPS8-207ENST00000436792 CENPJQ9HC77 1338 aaPredicted RBP11.29□□□□□ -0.6
VPS8-207ENST00000436792 ERICH2A1L162 156 aa11.29□□□□□ -0.6
VPS8-207ENST00000436792 EIF2S2P20042 333 aaKnown RBP11.29□□□□□ -0.6
VPS8-207ENST00000436792 GAS2L2Q8NHY3 880 aa11.29□□□□□ -0.6
VPS8-207ENST00000436792 CCDC47Q96A33 483 aaKnown RBP11.29□□□□□ -0.6
VPS8-207ENST00000436792 SAMD1Q6SPF0 538 aaPredicted RBP11.29□□□□□ -0.6
VPS8-207ENST00000436792 C11orf95C9JLR9 678 aaPredicted RBP11.28□□□□□ -0.6
VPS8-207ENST00000436792 TRDNQ13061 729 aa11.28□□□□□ -0.6
VPS8-207ENST00000436792 RIC3Q7Z5B4 369 aa11.28□□□□□ -0.6
VPS8-207ENST00000436792 LMTK3Q96Q04 1460 aa11.28□□□□□ -0.6
VPS8-207ENST00000436792 BAG6P46379 1132 aa11.28□□□□□ -0.6
VPS8-207ENST00000436792 DIAPH1O60610 1272 aaKnown RBP11.27□□□□□ -0.6
VPS8-207ENST00000436792 NF2P35240 595 aa11.27□□□□□ -0.6
VPS8-207ENST00000436792 RBM5P52756 815 aaKnown RBP eCLIP11.27□□□□□ -0.6
VPS8-207ENST00000436792 HSP90AB4PQ58FF6 505 aa11.27□□□□□ -0.6
VPS8-207ENST00000436792 PNISRQ8TF01 805 aaKnown RBP11.27□□□□□ -0.6
VPS8-207ENST00000436792 PHLDB1Q86UU1 1377 aa11.27□□□□□ -0.6
VPS8-207ENST00000436792 RAPGEF3O95398 923 aa11.27□□□□□ -0.61
VPS8-207ENST00000436792 AFAP1Q8N556 730 aa11.27□□□□□ -0.61
VPS8-207ENST00000436792 EXOC5O00471 708 aa11.27□□□□□ -0.61
VPS8-207ENST00000436792 AK7Q96M32 723 aa11.27□□□□□ -0.61
VPS8-207ENST00000436792 STARD3NLO95772 234 aa11.27□□□□□ -0.61
VPS8-207ENST00000436792 CLEC11AQ9Y240 323 aa11.26□□□□□ -0.61
VPS8-207ENST00000436792 APBB1O00213 710 aa11.26□□□□□ -0.61
VPS8-207ENST00000436792 CC2D2AQ9P2K1 1620 aa11.26□□□□□ -0.61
VPS8-207ENST00000436792 MAP3K9P80192 1104 aa11.26□□□□□ -0.61
VPS8-207ENST00000436792 G3BP1Q13283 466 aaKnown RBP eCLIP11.26□□□□□ -0.61
VPS8-207ENST00000436792 RPGRIP1LQ68CZ1 1315 aa11.25□□□□□ -0.61
VPS8-207ENST00000436792 PTMAP06454 111 aaKnown RBP11.25□□□□□ -0.61
VPS8-207ENST00000436792 TPM4P67936 248 aa11.25□□□□□ -0.61
VPS8-207ENST00000436792 SLC26A8Q96RN1 970 aa11.25□□□□□ -0.61
VPS8-207ENST00000436792 TBC1D2BQ9UPU7 963 aa11.25□□□□□ -0.61
VPS8-207ENST00000436792 KIF15Q9NS87 1388 aa11.25□□□□□ -0.61
VPS8-207ENST00000436792 APPP05067 770 aa11.25□□□□□ -0.61
VPS8-207ENST00000436792 ITPRIPQ8IWB1 547 aa11.25□□□□□ -0.61
VPS8-207ENST00000436792 VPS8Q8N3P4 1428 aa11.25□□□□□ -0.61
VPS8-207ENST00000436792 TMEM132AQ24JP5 1023 aa11.25□□□□□ -0.61
VPS8-207ENST00000436792 RWDD1Q9H446 243 aaPredicted RBP11.25□□□□□ -0.61
VPS8-207ENST00000436792 SCAPERQ9BY12 1400 aa11.24□□□□□ -0.61
VPS8-207ENST00000436792 SMARCA4P51532 1647 aa11.24□□□□□ -0.61
VPS8-207ENST00000436792 PAF1Q8N7H5 531 aa11.24□□□□□ -0.61
VPS8-207ENST00000436792 STK32BQ9NY57 414 aa11.24□□□□□ -0.61
VPS8-207ENST00000436792 NUTM2GQ5VZR2 741 aa11.24□□□□□ -0.61
VPS8-207ENST00000436792 TRIM6-TRIM34B2RNG4 842 aa11.24□□□□□ -0.61
VPS8-207ENST00000436792 CCDC27Q2M243 656 aa11.24□□□□□ -0.61
VPS8-207ENST00000436792 RRBP1Q9P2E9 1410 aaKnown RBP11.23□□□□□ -0.61
VPS8-207ENST00000436792 PLB1Q6P1J6 1458 aa11.23□□□□□ -0.61
VPS8-207ENST00000436792 FYCO1Q9BQS8 1478 aa11.23□□□□□ -0.61
VPS8-207ENST00000436792 SPDYE4A6NLX3 237 aa11.23□□□□□ -0.61
VPS8-207ENST00000436792 RUFY2Q8WXA3 655 aa11.23□□□□□ -0.61
VPS8-207ENST00000436792 MPHOSPH10O00566 681 aaKnown RBP11.22□□□□□ -0.61
VPS8-207ENST00000436792 TPM2P07951 284 aa11.22□□□□□ -0.61
VPS8-207ENST00000436792 A0A087WZG4 1122 aa11.21□□□□□ -0.61
VPS8-207ENST00000436792 TRIM29Q14134 588 aa11.21□□□□□ -0.61
VPS8-207ENST00000436792 DNAI2Q9GZS0 605 aa11.21□□□□□ -0.61
VPS8-207ENST00000436792 DNAJC5BQ9UF47 199 aa11.21□□□□□ -0.61
VPS8-207ENST00000436792 SYNJ1O43426 1573 aa11.21□□□□□ -0.62
VPS8-207ENST00000436792 RAD54L2Q9Y4B4 1467 aa11.21□□□□□ -0.62
VPS8-207ENST00000436792 FAM177BA6PVY3 158 aa11.2□□□□□ -0.62
VPS8-207ENST00000436792 LMOD1P29536 600 aaPredicted RBP11.2□□□□□ -0.62
VPS8-207ENST00000436792 LRRC59Q96AG4 307 aaKnown RBP11.2□□□□□ -0.62
VPS8-207ENST00000436792 TRIM21P19474 475 aaKnown RBP11.2□□□□□ -0.62
VPS8-207ENST00000436792 PMFBP1Q8TBY8 1022 aa11.2□□□□□ -0.62
VPS8-207ENST00000436792 TMOD3Q9NYL9 352 aa11.2□□□□□ -0.62
VPS8-207ENST00000436792 IFIT2P09913 472 aaKnown RBP11.2□□□□□ -0.62
VPS8-207ENST00000436792 MFAP1P55081 439 aaKnown RBP11.2□□□□□ -0.62
VPS8-207ENST00000436792 C8orf37Q96NL8 207 aa11.2□□□□□ -0.62
VPS8-207ENST00000436792 MPHOSPH8Q99549 860 aa11.2□□□□□ -0.62
VPS8-207ENST00000436792 TSPYL4Q9UJ04 414 aa11.2□□□□□ -0.62
VPS8-207ENST00000436792 ZSCAN29Q8IWY8 852 aaPredicted RBP11.19□□□□□ -0.62
VPS8-207ENST00000436792 SNAPC4Q5SXM2 1469 aa11.19□□□□□ -0.62
VPS8-207ENST00000436792 CSPP1Q1MSJ5 1256 aa11.19□□□□□ -0.62
VPS8-207ENST00000436792 SMARCC1Q92922 1105 aaPredicted RBP11.19□□□□□ -0.62
VPS8-207ENST00000436792 RRP7AQ9Y3A4 280 aaKnown RBP11.19□□□□□ -0.62
VPS8-207ENST00000436792 MYO1BO43795 1136 aa11.19□□□□□ -0.62
VPS8-207ENST00000436792 RPGRQ92834 1020 aaKnown RBP11.19□□□□□ -0.62
VPS8-207ENST00000436792 MPHOSPH6Q99547 160 aaKnown RBP11.19□□□□□ -0.62
VPS8-207ENST00000436792 NPHP3Q7Z494 1330 aa11.18□□□□□ -0.62
VPS8-207ENST00000436792 SIN3AQ96ST3 1273 aa11.18□□□□□ -0.62
VPS8-207ENST00000436792 ARHGEF6Q15052 776 aa11.18□□□□□ -0.62
VPS8-207ENST00000436792 API5Q9BZZ5 524 aaKnown RBP11.18□□□□□ -0.62
VPS8-207ENST00000436792 DENND4BO75064 1496 aaPredicted RBP11.18□□□□□ -0.62
VPS8-207ENST00000436792 HSCBQ8IWL3 235 aa11.18□□□□□ -0.62
VPS8-207ENST00000436792 NOC3LQ8WTT2 800 aaKnown RBP11.18□□□□□ -0.62
VPS8-207ENST00000436792 SLF2Q8IX21 1173 aa11.17□□□□□ -0.62
VPS8-207ENST00000436792 CNNM1Q9NRU3 951 aa11.17□□□□□ -0.62
VPS8-207ENST00000436792 SART3Q15020 963 aaKnown RBP11.17□□□□□ -0.62
VPS8-207ENST00000436792 BCL2L13Q9BXK5 485 aa11.17□□□□□ -0.62
VPS8-207ENST00000436792 RAB3GAP2Q9H2M9 1393 aa11.17□□□□□ -0.62
VPS8-207ENST00000436792 FKBP5Q13451 457 aaPredicted RBP11.17□□□□□ -0.62
VPS8-207ENST00000436792 TPRNQ4KMQ1 711 aa11.17□□□□□ -0.62
VPS8-207ENST00000436792 IGHMBP2P38935 993 aaKnown RBP11.16□□□□□ -0.62
VPS8-207ENST00000436792 GNAI1P63096 354 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms