RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 WRNQ14191 1432 aaPredicted RBP eCLIP8.38□□□□□ -1.07
VRK2-206ENST00000435505 CLCN1P35523 988 aa8.37□□□□□ -1.07
VRK2-206ENST00000435505 GIPC2Q8TF65 315 aa8.37□□□□□ -1.07
VRK2-206ENST00000435505 LMOD1P29536 600 aaPredicted RBP8.37□□□□□ -1.07
VRK2-206ENST00000435505 PALM3A6NDB9 673 aaPredicted RBP8.36□□□□□ -1.07
VRK2-206ENST00000435505 FAM161AQ3B820 660 aa8.36□□□□□ -1.07
VRK2-206ENST00000435505 TAGLNQ01995 201 aaKnown RBP8.35□□□□□ -1.07
VRK2-206ENST00000435505 SPDYE1Q8NFV5 336 aaPredicted RBP8.35□□□□□ -1.07
VRK2-206ENST00000435505 BCL2L13Q9BXK5 485 aa8.35□□□□□ -1.07
VRK2-206ENST00000435505 CCDC61Q9Y6R9 512 aa8.35□□□□□ -1.07
VRK2-206ENST00000435505 ANKRD62A6NC57 917 aa8.34□□□□□ -1.07
VRK2-206ENST00000435505 IRX6P78412 446 aaPredicted RBP8.34□□□□□ -1.07
VRK2-206ENST00000435505 PHLDB3Q6NSJ2 640 aa8.34□□□□□ -1.07
VRK2-206ENST00000435505 UCN2Q96RP3 112 aa8.34□□□□□ -1.07
VRK2-206ENST00000435505 FAM217BQ9NTX9 383 aaPredicted RBP8.34□□□□□ -1.07
VRK2-206ENST00000435505 ANKRD13AQ8IZ07 590 aa8.33□□□□□ -1.08
VRK2-206ENST00000435505 ZNF526Q8TF50 670 aaPredicted RBP8.33□□□□□ -1.08
VRK2-206ENST00000435505 NOP58Q9Y2X3 529 aaKnown RBP8.33□□□□□ -1.08
VRK2-206ENST00000435505 PAK3O75914 559 aaPredicted RBP8.32□□□□□ -1.08
VRK2-206ENST00000435505 TBC1D2Q9BYX2 928 aa8.32□□□□□ -1.08
VRK2-206ENST00000435505 RB1CC1Q8TDY2 1594 aa8.32□□□□□ -1.08
VRK2-206ENST00000435505 TFIP11Q9UBB9 837 aaKnown RBP8.32□□□□□ -1.08
VRK2-206ENST00000435505 GPR37L1O60883 481 aa8.31□□□□□ -1.08
VRK2-206ENST00000435505 CANXP27824 592 aaKnown RBP8.31□□□□□ -1.08
VRK2-206ENST00000435505 TMEM259Q4ZIN3 620 aa8.31□□□□□ -1.08
VRK2-206ENST00000435505 C8orf37Q96NL8 207 aa8.31□□□□□ -1.08
VRK2-206ENST00000435505 CDHR5Q9HBB8 845 aa8.31□□□□□ -1.08
VRK2-206ENST00000435505 WWC1Q8IX03 1113 aa8.31□□□□□ -1.08
VRK2-206ENST00000435505 HIRIP3Q9BW71 556 aaPredicted RBP8.31□□□□□ -1.08
VRK2-206ENST00000435505 NAALADL2Q58DX5 795 aa8.3□□□□□ -1.08
VRK2-206ENST00000435505 PPP2R2DQ66LE6 453 aa8.3□□□□□ -1.08
VRK2-206ENST00000435505 ABCC9O60706 1549 aa8.3□□□□□ -1.08
VRK2-206ENST00000435505 C1QBPQ07021 282 aaKnown RBP8.3□□□□□ -1.08
VRK2-206ENST00000435505 VAC14Q08AM6 782 aa8.3□□□□□ -1.08
VRK2-206ENST00000435505 ZC3H4Q9UPT8 1303 aaKnown RBP8.29□□□□□ -1.08
VRK2-206ENST00000435505 QPCTQ16769 361 aa8.29□□□□□ -1.08
VRK2-206ENST00000435505 CSPP1Q1MSJ5 1256 aa8.29□□□□□ -1.08
VRK2-206ENST00000435505 MAP3K13O43283 966 aa8.29□□□□□ -1.08
VRK2-206ENST00000435505 ATG7O95352 703 aa8.29□□□□□ -1.08
VRK2-206ENST00000435505 MARCH6O60337 910 aa8.28□□□□□ -1.08
VRK2-206ENST00000435505 SCNN1AP37088 669 aa8.28□□□□□ -1.08
VRK2-206ENST00000435505 RTL5Q5HYW3 569 aaPredicted RBP8.28□□□□□ -1.08
VRK2-206ENST00000435505 UBXN4Q92575 508 aa8.28□□□□□ -1.08
VRK2-206ENST00000435505 NPDC1Q9NQX5 325 aaPredicted RBP8.28□□□□□ -1.08
VRK2-206ENST00000435505 ZC3H6P61129 1189 aaKnown RBP8.28□□□□□ -1.08
VRK2-206ENST00000435505 STK32AQ8WU08 396 aa8.28□□□□□ -1.08
VRK2-206ENST00000435505 TSR1Q2NL82 804 aaKnown RBP8.27□□□□□ -1.09
VRK2-206ENST00000435505 NOL8Q76FK4 1167 aaKnown RBP8.27□□□□□ -1.09
VRK2-206ENST00000435505 CEP162Q5TB80 1403 aa8.27□□□□□ -1.09
VRK2-206ENST00000435505 RECKO95980 971 aa8.27□□□□□ -1.09
VRK2-206ENST00000435505 GJD4Q96KN9 370 aaPredicted RBP8.27□□□□□ -1.09
VRK2-206ENST00000435505 PSMD1Q99460 953 aa8.27□□□□□ -1.09
VRK2-206ENST00000435505 AP1G2O75843 785 aa8.26□□□□□ -1.09
VRK2-206ENST00000435505 UPF1Q92900 1129 aaKnown RBP eCLIP8.26□□□□□ -1.09
VRK2-206ENST00000435505 MAP3K9P80192 1104 aa8.25□□□□□ -1.09
VRK2-206ENST00000435505 CHADLQ6NUI6 762 aa8.25□□□□□ -1.09
VRK2-206ENST00000435505 SLAIN2Q9P270 581 aa8.25□□□□□ -1.09
VRK2-206ENST00000435505 ZMIZ1Q9ULJ6 1067 aa8.25□□□□□ -1.09
VRK2-206ENST00000435505 SERPINB4P48594 390 aa8.25□□□□□ -1.09
VRK2-206ENST00000435505 FOSBP53539 338 aa8.25□□□□□ -1.09
VRK2-206ENST00000435505 TMEM164Q5U3C3 297 aa8.25□□□□□ -1.09
VRK2-206ENST00000435505 DPH6Q7L8W6 267 aa8.25□□□□□ -1.09
VRK2-206ENST00000435505 NPAS4Q8IUM7 802 aa8.25□□□□□ -1.09
VRK2-206ENST00000435505 PRDM16Q9HAZ2 1276 aa8.25□□□□□ -1.09
VRK2-206ENST00000435505 NCLP19338 710 aaKnown RBP8.24□□□□□ -1.09
VRK2-206ENST00000435505 TAF7LQ5H9L4 462 aa8.24□□□□□ -1.09
VRK2-206ENST00000435505 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.24□□□□□ -1.09
VRK2-206ENST00000435505 C7P10643 843 aa8.24□□□□□ -1.09
VRK2-206ENST00000435505 ALG2Q9H553 416 aa8.24□□□□□ -1.09
VRK2-206ENST00000435505 NACADO15069 1562 aa8.24□□□□□ -1.09
VRK2-206ENST00000435505 ANKRD33BA6NCL7 494 aa8.23□□□□□ -1.09
VRK2-206ENST00000435505 FOXK1P85037 733 aa8.23□□□□□ -1.09
VRK2-206ENST00000435505 TRIM52Q96A61 297 aa8.23□□□□□ -1.09
VRK2-206ENST00000435505 HMX1Q9NP08 348 aaPredicted RBP8.23□□□□□ -1.09
VRK2-206ENST00000435505 MAFBQ9Y5Q3 323 aaPredicted RBP8.23□□□□□ -1.09
VRK2-206ENST00000435505 USP17L8P0C7I0 530 aa8.23□□□□□ -1.09
VRK2-206ENST00000435505 C9orf131Q5VYM1 1079 aa8.23□□□□□ -1.09
VRK2-206ENST00000435505 PLPP6Q8IY26 295 aa8.23□□□□□ -1.09
VRK2-206ENST00000435505 PRR7Q8TB68 274 aa8.23□□□□□ -1.09
VRK2-206ENST00000435505 CC2D2BQ6DHV5 1058 aa8.22□□□□□ -1.09
VRK2-206ENST00000435505 RIC3Q7Z5B4 369 aa8.22□□□□□ -1.09
VRK2-206ENST00000435505 ZNF710Q8N1W2 664 aa8.22□□□□□ -1.09
VRK2-206ENST00000435505 DNAJC2Q99543 621 aaKnown RBP8.22□□□□□ -1.09
VRK2-206ENST00000435505 C11orf95C9JLR9 678 aaPredicted RBP8.21□□□□□ -1.09
VRK2-206ENST00000435505 RAB11FIP3O75154 756 aa8.21□□□□□ -1.09
VRK2-206ENST00000435505 MARSP56192 900 aaKnown RBP8.21□□□□□ -1.09
VRK2-206ENST00000435505 TBC1D9Q6ZT07 1266 aa8.21□□□□□ -1.09
VRK2-206ENST00000435505 MICAL1Q8TDZ2 1067 aa8.21□□□□□ -1.09
VRK2-206ENST00000435505 WASHC2AQ641Q2 1341 aa8.21□□□□□ -1.09
VRK2-206ENST00000435505 METTL3Q86U44 580 aaKnown RBP8.21□□□□□ -1.1
VRK2-206ENST00000435505 GPATCH3Q96I76 525 aa8.21□□□□□ -1.1
VRK2-206ENST00000435505 SOWAHDA6NJG2 315 aa8.2□□□□□ -1.1
VRK2-206ENST00000435505 PCDHB15Q9Y5E8 787 aa8.2□□□□□ -1.1
VRK2-206ENST00000435505 LOC102724159A0A0B4J2E5 919 aa8.19□□□□□ -1.1
VRK2-206ENST00000435505 ERCC3P19447 782 aa8.19□□□□□ -1.1
VRK2-206ENST00000435505 PTGER2P43116 358 aa8.19□□□□□ -1.1
VRK2-206ENST00000435505 PWP2Q15269 919 aaKnown RBP8.19□□□□□ -1.1
VRK2-206ENST00000435505 TSNAXIP1Q2TAA8 658 aa8.19□□□□□ -1.1
VRK2-206ENST00000435505 SLC52A1Q9NWF4 448 aa8.19□□□□□ -1.1
VRK2-206ENST00000435505 DHX57Q6P158 1386 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms