RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 NUDT18Q6ZVK8 323 aa13.37□□□□□ -0.27
PTPRK-212ENST00000434424 IL27Q8NEV9 243 aa13.37□□□□□ -0.27
PTPRK-212ENST00000434424 NPDC1Q9NQX5 325 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-212ENST00000434424 TTC13Q8NBP0 860 aa13.36□□□□□ -0.27
PTPRK-212ENST00000434424 KDM4CQ9H3R0 1056 aa13.35□□□□□ -0.27
PTPRK-212ENST00000434424 RBM27Q9P2N5 1060 aaKnown RBP13.35□□□□□ -0.27
PTPRK-212ENST00000434424 ZMYND15Q9H091 742 aa13.34□□□□□ -0.27
PTPRK-212ENST00000434424 PADI6Q6TGC4 694 aa13.31□□□□□ -0.28
PTPRK-212ENST00000434424 MTRQ99707 1265 aa13.31□□□□□ -0.28
PTPRK-212ENST00000434424 TRIM66O15016 1216 aa13.3□□□□□ -0.28
PTPRK-212ENST00000434424 PDE4DQ08499 809 aa13.3□□□□□ -0.28
PTPRK-212ENST00000434424 APLP1P51693 650 aa13.29□□□□□ -0.28
PTPRK-212ENST00000434424 RSPH6AQ9H0K4 717 aa13.28□□□□□ -0.28
PTPRK-212ENST00000434424 ZNF516Q92618 1163 aa13.27□□□□□ -0.29
PTPRK-212ENST00000434424 IL21Q9HBE4 155 aa13.26□□□□□ -0.29
PTPRK-212ENST00000434424 RNF40O75150 1001 aa13.25□□□□□ -0.29
PTPRK-212ENST00000434424 SWT1Q5T5J6 900 aaKnown RBP13.25□□□□□ -0.29
PTPRK-212ENST00000434424 EYA1Q99502 592 aa13.23□□□□□ -0.29
PTPRK-212ENST00000434424 PPP1R18Q6NYC8 613 aa13.22□□□□□ -0.29
PTPRK-212ENST00000434424 Q6ZNB5 142 aa13.22□□□□□ -0.29
PTPRK-212ENST00000434424 HDGFP51858 240 aaKnown RBP13.2□□□□□ -0.3
PTPRK-212ENST00000434424 LCE2BO14633 110 aa13.19□□□□□ -0.3
PTPRK-212ENST00000434424 UBTFP17480 764 aaKnown RBP13.19□□□□□ -0.3
PTPRK-212ENST00000434424 NKX2-3Q8TAU0 364 aa13.19□□□□□ -0.3
PTPRK-212ENST00000434424 PRKD2Q9BZL6 878 aa13.18□□□□□ -0.3
PTPRK-212ENST00000434424 PODXL2Q9NZ53 605 aa13.17□□□□□ -0.3
PTPRK-212ENST00000434424 SLF2Q8IX21 1173 aa13.16□□□□□ -0.3
PTPRK-212ENST00000434424 PTGDRQ13258 359 aa13.15□□□□□ -0.3
PTPRK-212ENST00000434424 MINK1Q8N4C8 1332 aaPredicted RBP13.14□□□□□ -0.31
PTPRK-212ENST00000434424 COPS2P61201 443 aa13.14□□□□□ -0.31
PTPRK-212ENST00000434424 FAM117AQ9C073 453 aa13.14□□□□□ -0.31
PTPRK-212ENST00000434424 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.14□□□□□ -0.31
PTPRK-212ENST00000434424 GPR37O15354 613 aa13.13□□□□□ -0.31
PTPRK-212ENST00000434424 GFRA3O60609 400 aa13.13□□□□□ -0.31
PTPRK-212ENST00000434424 LAPTM4AQ15012 233 aa13.12□□□□□ -0.31
PTPRK-212ENST00000434424 DDRGK1Q96HY6 314 aa13.12□□□□□ -0.31
PTPRK-212ENST00000434424 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
PTPRK-212ENST00000434424 V9GY48 417 aaPredicted RBP13.1□□□□□ -0.31
PTPRK-212ENST00000434424 MAP2K5Q13163 448 aa13.09□□□□□ -0.31
PTPRK-212ENST00000434424 ADGRG1Q9Y653 693 aa13.08□□□□□ -0.32
PTPRK-212ENST00000434424 NUTM2FA1L443 756 aa13.07□□□□□ -0.32
PTPRK-212ENST00000434424 FAM161AQ3B820 660 aa13.07□□□□□ -0.32
PTPRK-212ENST00000434424 ZPR1O75312 459 aa13.06□□□□□ -0.32
PTPRK-212ENST00000434424 CCDC102AQ96A19 550 aa13.06□□□□□ -0.32
PTPRK-212ENST00000434424 ARID3AQ99856 593 aa13.06□□□□□ -0.32
PTPRK-212ENST00000434424 PLEKHG3A1L390 1219 aa13.05□□□□□ -0.32
PTPRK-212ENST00000434424 DNAJB2P25686 324 aa13.05□□□□□ -0.32
PTPRK-212ENST00000434424 TMEM134Q9H6X4 195 aa13.05□□□□□ -0.32
PTPRK-212ENST00000434424 NRG2O14511 850 aaPredicted RBP13.04□□□□□ -0.32
PTPRK-212ENST00000434424 IRF6O14896 467 aa13.04□□□□□ -0.32
PTPRK-212ENST00000434424 FLIIQ13045 1269 aa13.04□□□□□ -0.32
PTPRK-212ENST00000434424 AMHR2Q16671 573 aa13.04□□□□□ -0.32
PTPRK-212ENST00000434424 BLOC1S3Q6QNY0 202 aa13.04□□□□□ -0.32
PTPRK-212ENST00000434424 NISCHQ9Y2I1 1504 aa13.03□□□□□ -0.32
PTPRK-212ENST00000434424 TRAF7Q6Q0C0 670 aa13.03□□□□□ -0.32
PTPRK-212ENST00000434424 PCDHB3Q9Y5E6 796 aa13.03□□□□□ -0.32
PTPRK-212ENST00000434424 SLC4A3P48751 1232 aa13.02□□□□□ -0.33
PTPRK-212ENST00000434424 RBM46Q8TBY0 533 aaKnown RBP13.02□□□□□ -0.33
PTPRK-212ENST00000434424 RCCD1A6NED2 376 aa13.01□□□□□ -0.33
PTPRK-212ENST00000434424 GNPATO15228 680 aa13.01□□□□□ -0.33
PTPRK-212ENST00000434424 PARP9Q8IXQ6 854 aa13.01□□□□□ -0.33
PTPRK-212ENST00000434424 TMUB1Q9BVT8 246 aa13□□□□□ -0.33
PTPRK-212ENST00000434424 PRR14Q9BWN1 585 aa13□□□□□ -0.33
PTPRK-212ENST00000434424 GGCXP38435 758 aa12.99□□□□□ -0.33
PTPRK-212ENST00000434424 EMID1Q96A84 441 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-212ENST00000434424 TLL1O43897 1013 aa12.98□□□□□ -0.33
PTPRK-212ENST00000434424 TRIM26Q12899 539 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-212ENST00000434424 HIC1Q14526 733 aa12.98□□□□□ -0.33
PTPRK-212ENST00000434424 C1orf115Q9H7X2 142 aa12.98□□□□□ -0.33
PTPRK-212ENST00000434424 RNF223E7ERA6 249 aa12.96□□□□□ -0.33
PTPRK-212ENST00000434424 FCHSD2O94868 740 aa12.96□□□□□ -0.33
PTPRK-212ENST00000434424 SLC10A3P09131 477 aa12.96□□□□□ -0.33
PTPRK-212ENST00000434424 GOPCQ9HD26 462 aa12.96□□□□□ -0.33
PTPRK-212ENST00000434424 PDZRN3Q9UPQ7 1066 aa12.96□□□□□ -0.33
PTPRK-212ENST00000434424 APBB1O00213 710 aa12.95□□□□□ -0.34
PTPRK-212ENST00000434424 ACTN4O43707 911 aaKnown RBP12.95□□□□□ -0.34
PTPRK-212ENST00000434424 CFHP08603 1231 aa12.94□□□□□ -0.34
PTPRK-212ENST00000434424 TTLL12Q14166 644 aaPredicted RBP12.94□□□□□ -0.34
PTPRK-212ENST00000434424 ARID3CA6NKF2 412 aa12.93□□□□□ -0.34
PTPRK-212ENST00000434424 TRIM67Q6ZTA4 783 aa12.93□□□□□ -0.34
PTPRK-212ENST00000434424 RANGAP1P46060 587 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-212ENST00000434424 PXYLP1Q8TE99 480 aa12.91□□□□□ -0.34
PTPRK-212ENST00000434424 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.9□□□□□ -0.34
PTPRK-212ENST00000434424 FECHP22830 423 aa12.9□□□□□ -0.34
PTPRK-212ENST00000434424 KMT5BQ4FZB7 885 aa12.9□□□□□ -0.34
PTPRK-212ENST00000434424 PPEF1O14829 653 aaPredicted RBP12.89□□□□□ -0.35
PTPRK-212ENST00000434424 PCMTD1Q96MG8 357 aaPredicted RBP12.89□□□□□ -0.35
PTPRK-212ENST00000434424 S1PR4O95977 384 aa12.88□□□□□ -0.35
PTPRK-212ENST00000434424 SLC19A1P41440 591 aa12.88□□□□□ -0.35
PTPRK-212ENST00000434424 HRCP23327 699 aa12.86□□□□□ -0.35
PTPRK-212ENST00000434424 A6NJR5 290 aa12.85□□□□□ -0.35
PTPRK-212ENST00000434424 OATP04181 439 aa12.85□□□□□ -0.35
PTPRK-212ENST00000434424 GIGYF2Q6Y7W6 1299 aaKnown RBP12.85□□□□□ -0.35
PTPRK-212ENST00000434424 METTL3Q86U44 580 aaKnown RBP12.85□□□□□ -0.35
PTPRK-212ENST00000434424 ANKLE1Q8NAG6 615 aa12.85□□□□□ -0.35
PTPRK-212ENST00000434424 SPRYD7Q5W111 196 aa12.84□□□□□ -0.35
PTPRK-212ENST00000434424 LIAT1Q6ZQX7 453 aa12.84□□□□□ -0.35
PTPRK-212ENST00000434424 ADH1BP00325 375 aa12.83□□□□□ -0.36
PTPRK-212ENST00000434424 MS4A1P11836 297 aa12.82□□□□□ -0.36
PTPRK-212ENST00000434424 TRAK2O60296 914 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms