RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 SPRYD3Q8NCJ5 442 aa15.95■□□□□ 0.14
LRRTM1-206ENST00000433224 ZNF330Q9Y3S2 320 aaPredicted RBP15.95■□□□□ 0.14
LRRTM1-206ENST00000433224 EIF4G3O43432 1585 aaKnown RBP15.95■□□□□ 0.14
LRRTM1-206ENST00000433224 WAPLQ7Z5K2 1190 aa15.95■□□□□ 0.14
LRRTM1-206ENST00000433224 TPRNQ4KMQ1 711 aa15.95■□□□□ 0.14
LRRTM1-206ENST00000433224 CABP1Q9NZU7 370 aa15.94■□□□□ 0.14
LRRTM1-206ENST00000433224 SLC4A10Q6U841 1118 aa15.94■□□□□ 0.14
LRRTM1-206ENST00000433224 DISP1Q96F81 1524 aa15.94■□□□□ 0.14
LRRTM1-206ENST00000433224 UGGT2Q9NYU1 1516 aa15.93■□□□□ 0.14
LRRTM1-206ENST00000433224 BECN1Q14457 450 aa15.93■□□□□ 0.14
LRRTM1-206ENST00000433224 PNISRQ8TF01 805 aaKnown RBP15.93■□□□□ 0.14
LRRTM1-206ENST00000433224 KIF14Q15058 1648 aa15.93■□□□□ 0.14
LRRTM1-206ENST00000433224 NECTIN2Q92692 538 aa15.93■□□□□ 0.14
LRRTM1-206ENST00000433224 RRP1P56182 461 aaKnown RBP15.92■□□□□ 0.14
LRRTM1-206ENST00000433224 PDE4AP27815 886 aa15.92■□□□□ 0.14
LRRTM1-206ENST00000433224 RAPGEF6Q8TEU7 1601 aa15.92■□□□□ 0.14
LRRTM1-206ENST00000433224 FANCAO15360 1455 aa15.91■□□□□ 0.14
LRRTM1-206ENST00000433224 PDE3BQ13370 1112 aa15.91■□□□□ 0.14
LRRTM1-206ENST00000433224 DIAPH1O60610 1272 aaKnown RBP15.9■□□□□ 0.14
LRRTM1-206ENST00000433224 RIPK4P57078 832 aa15.9■□□□□ 0.14
LRRTM1-206ENST00000433224 TRAPPC8Q9Y2L5 1435 aa15.9■□□□□ 0.14
LRRTM1-206ENST00000433224 CDK19Q9BWU1 502 aa15.89■□□□□ 0.13
LRRTM1-206ENST00000433224 KIAA0556O60303 1618 aa15.88■□□□□ 0.13
LRRTM1-206ENST00000433224 OS9Q13438 667 aaPredicted RBP15.88■□□□□ 0.13
LRRTM1-206ENST00000433224 TCP11L2Q8N4U5 519 aa15.88■□□□□ 0.13
LRRTM1-206ENST00000433224 SLC52A1Q9NWF4 448 aa15.88■□□□□ 0.13
LRRTM1-206ENST00000433224 TAOK2Q9UL54 1235 aa15.88■□□□□ 0.13
LRRTM1-206ENST00000433224 CTTNBP2Q8WZ74 1663 aa15.88■□□□□ 0.13
LRRTM1-206ENST00000433224 SLKQ9H2G2 1235 aaPredicted RBP15.87■□□□□ 0.13
LRRTM1-206ENST00000433224 RPRD2Q5VT52 1461 aaKnown RBP15.87■□□□□ 0.13
LRRTM1-206ENST00000433224 ASXL2Q76L83 1435 aa15.86■□□□□ 0.13
LRRTM1-206ENST00000433224 WDR62O43379 1518 aa15.86■□□□□ 0.13
LRRTM1-206ENST00000433224 FBLN1P23142 703 aa15.86■□□□□ 0.13
LRRTM1-206ENST00000433224 SYCP2Q9BX26 1530 aa15.85■□□□□ 0.13
LRRTM1-206ENST00000433224 NLRP6P59044 892 aa15.85■□□□□ 0.13
LRRTM1-206ENST00000433224 PSME1Q06323 249 aa15.85■□□□□ 0.13
LRRTM1-206ENST00000433224 STAC3Q96MF2 364 aa15.85■□□□□ 0.13
LRRTM1-206ENST00000433224 MAGI3Q5TCQ9 1506 aa15.85■□□□□ 0.13
LRRTM1-206ENST00000433224 IPO8O15397 1037 aaKnown RBP15.84■□□□□ 0.13
LRRTM1-206ENST00000433224 PANK1Q8TE04 598 aa15.84■□□□□ 0.13
LRRTM1-206ENST00000433224 E9PSI1 815 aa15.84■□□□□ 0.13
LRRTM1-206ENST00000433224 ANP32BQ92688 251 aaKnown RBP15.84■□□□□ 0.13
LRRTM1-206ENST00000433224 XPCQ01831 940 aaPredicted RBP15.84■□□□□ 0.13
LRRTM1-206ENST00000433224 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.84■□□□□ 0.13
LRRTM1-206ENST00000433224 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.13
LRRTM1-206ENST00000433224 MS4A1P11836 297 aa15.83■□□□□ 0.13
LRRTM1-206ENST00000433224 TSR2Q969E8 191 aaKnown RBP15.83■□□□□ 0.12
LRRTM1-206ENST00000433224 NUP160Q12769 1436 aa15.82■□□□□ 0.12
LRRTM1-206ENST00000433224 RRS1Q15050 365 aaKnown RBP15.82■□□□□ 0.12
LRRTM1-206ENST00000433224 BRD4O60885 1362 aaPredicted RBP15.82■□□□□ 0.12
LRRTM1-206ENST00000433224 RUNDC1Q96C34 613 aa15.81■□□□□ 0.12
LRRTM1-206ENST00000433224 PLCH2O75038 1416 aa15.81■□□□□ 0.12
LRRTM1-206ENST00000433224 ZNF428Q96B54 188 aa15.81■□□□□ 0.12
LRRTM1-206ENST00000433224 BCAR3O75815 825 aa15.8■□□□□ 0.12
LRRTM1-206ENST00000433224 PRKAR2BP31323 418 aa15.8■□□□□ 0.12
LRRTM1-206ENST00000433224 NGEFQ8N5V2 710 aa15.8■□□□□ 0.12
LRRTM1-206ENST00000433224 EIF2S2P20042 333 aaKnown RBP15.79■□□□□ 0.12
LRRTM1-206ENST00000433224 DISP3Q9P2K9 1392 aa15.79■□□□□ 0.12
LRRTM1-206ENST00000433224 CCDC9Q9Y3X0 531 aaKnown RBP15.79■□□□□ 0.12
LRRTM1-206ENST00000433224 STK31Q9BXU1 1019 aa15.79■□□□□ 0.12
LRRTM1-206ENST00000433224 TARBP1Q13395 1621 aaKnown RBP15.79■□□□□ 0.12
LRRTM1-206ENST00000433224 DHX29Q7Z478 1369 aaKnown RBP15.78■□□□□ 0.12
LRRTM1-206ENST00000433224 ESCO1Q5FWF5 840 aa15.78■□□□□ 0.12
LRRTM1-206ENST00000433224 NAP1L5Q96NT1 182 aaPredicted RBP15.78■□□□□ 0.12
LRRTM1-206ENST00000433224 GZF1Q9H116 711 aaPredicted RBP15.78■□□□□ 0.12
LRRTM1-206ENST00000433224 RWDD1Q9H446 243 aaPredicted RBP15.78■□□□□ 0.12
LRRTM1-206ENST00000433224 SKAP1Q86WV1 359 aa15.78■□□□□ 0.12
LRRTM1-206ENST00000433224 CALD1Q05682 793 aaKnown RBP15.78■□□□□ 0.12
LRRTM1-206ENST00000433224 NOS1P29475 1434 aa15.77■□□□□ 0.12
LRRTM1-206ENST00000433224 ABTB2Q8N961 1025 aa15.77■□□□□ 0.11
LRRTM1-206ENST00000433224 IL27Q8NEV9 243 aa15.77■□□□□ 0.11
LRRTM1-206ENST00000433224 CEP170Q5SW79 1584 aa15.76■□□□□ 0.11
LRRTM1-206ENST00000433224 MFAP1P55081 439 aaKnown RBP15.76■□□□□ 0.11
LRRTM1-206ENST00000433224 THUMPD2Q9BTF0 503 aaKnown RBP15.76■□□□□ 0.11
LRRTM1-206ENST00000433224 GLIPR1L2Q4G1C9 344 aa15.76■□□□□ 0.11
LRRTM1-206ENST00000433224 TRIM44Q96DX7 344 aaPredicted RBP15.75■□□□□ 0.11
LRRTM1-206ENST00000433224 PBRM1Q86U86 1689 aa15.75■□□□□ 0.11
LRRTM1-206ENST00000433224 ZKSCAN2Q63HK3 967 aa15.74■□□□□ 0.11
LRRTM1-206ENST00000433224 USP35Q9P2H5 1018 aa15.74■□□□□ 0.11
LRRTM1-206ENST00000433224 NSD3Q9BZ95 1437 aa15.73■□□□□ 0.11
LRRTM1-206ENST00000433224 DENND4BO75064 1496 aaPredicted RBP15.73■□□□□ 0.11
LRRTM1-206ENST00000433224 EXOSC9Q06265 439 aaKnown RBP15.73■□□□□ 0.11
LRRTM1-206ENST00000433224 NCLP19338 710 aaKnown RBP15.73■□□□□ 0.11
LRRTM1-206ENST00000433224 SULT6B1Q6IMI4 303 aa15.73■□□□□ 0.11
LRRTM1-206ENST00000433224 PROSER2Q86WR7 435 aaPredicted RBP15.73■□□□□ 0.11
LRRTM1-206ENST00000433224 THEMISQ8N1K5 641 aaPredicted RBP15.73■□□□□ 0.11
LRRTM1-206ENST00000433224 NPHP1O15259 732 aa15.72■□□□□ 0.11
LRRTM1-206ENST00000433224 NME9Q86XW9 330 aa15.72■□□□□ 0.11
LRRTM1-206ENST00000433224 NUDT16Q96DE0 195 aaKnown RBP15.72■□□□□ 0.11
LRRTM1-206ENST00000433224 CFAP43Q8NDM7 1665 aa15.71■□□□□ 0.11
LRRTM1-206ENST00000433224 LMOD3Q0VAK6 560 aa15.71■□□□□ 0.11
LRRTM1-206ENST00000433224 TEFQ10587 303 aa15.71■□□□□ 0.11
LRRTM1-206ENST00000433224 GSE1Q14687 1217 aa15.71■□□□□ 0.11
LRRTM1-206ENST00000433224 ANO8Q9HCE9 1232 aaPredicted RBP15.71■□□□□ 0.1
LRRTM1-206ENST00000433224 CHMP3Q9Y3E7 222 aa15.71■□□□□ 0.1
LRRTM1-206ENST00000433224 TCOF1Q13428 1488 aaKnown RBP15.7■□□□□ 0.1
LRRTM1-206ENST00000433224 KDM5BQ9UGL1 1544 aa15.7■□□□□ 0.1
LRRTM1-206ENST00000433224 ANKRD45Q5TZF3 282 aa15.7■□□□□ 0.1
LRRTM1-206ENST00000433224 CHMP4BQ9H444 224 aaKnown RBP15.7■□□□□ 0.1
LRRTM1-206ENST00000433224 RTEL1-TNFRSF6BF6WH68 1400 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms