RNA–Protein interactions for RNA: ENST00000433066.1

SMPD4P1-202, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 3

Gene SMPD4P1, Length 483 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-202ENST00000433066 ERBINQ96RT1 1412 aa11.66□□□□□ -0.54
SMPD4P1-202ENST00000433066 NCOA3Q9Y6Q9 1424 aa11.66□□□□□ -0.54
SMPD4P1-202ENST00000433066 ADGRB3O60242 1522 aa11.65□□□□□ -0.54
SMPD4P1-202ENST00000433066 MEX3CQ5U5Q3 659 aaKnown RBP11.65□□□□□ -0.54
SMPD4P1-202ENST00000433066 ZFYVE9O95405 1425 aa11.65□□□□□ -0.54
SMPD4P1-202ENST00000433066 KIF15Q9NS87 1388 aa11.65□□□□□ -0.55
SMPD4P1-202ENST00000433066 STAG3Q9UJ98 1225 aa11.63□□□□□ -0.55
SMPD4P1-202ENST00000433066 PLEKHG1Q9ULL1 1385 aa11.63□□□□□ -0.55
SMPD4P1-202ENST00000433066 CHD2O14647 1828 aaKnown RBP11.62□□□□□ -0.55
SMPD4P1-202ENST00000433066 AFF2P51816 1311 aa11.61□□□□□ -0.55
SMPD4P1-202ENST00000433066 MYOM3Q5VTT5 1437 aa11.61□□□□□ -0.55
SMPD4P1-202ENST00000433066 ABCC5O15440 1437 aa11.6□□□□□ -0.55
SMPD4P1-202ENST00000433066 BRINP3Q76B58 766 aa11.6□□□□□ -0.55
SMPD4P1-202ENST00000433066 ADAMTS13Q76LX8 1427 aa11.6□□□□□ -0.55
SMPD4P1-202ENST00000433066 SETD5Q9C0A6 1442 aa11.6□□□□□ -0.55
SMPD4P1-202ENST00000433066 CADPS2Q86UW7 1296 aa11.59□□□□□ -0.55
SMPD4P1-202ENST00000433066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMPD4P1-202ENST00000433066 TBX22Q9Y458 520 aa11.59□□□□□ -0.55
SMPD4P1-202ENST00000433066 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.59□□□□□ -0.55
SMPD4P1-202ENST00000433066 C19orf44Q9H6X5 657 aa11.58□□□□□ -0.56
SMPD4P1-202ENST00000433066 RRP7BPQ9NSQ0 103 aa11.58□□□□□ -0.56
SMPD4P1-202ENST00000433066 RIMS2Q9UQ26 1411 aa11.58□□□□□ -0.56
SMPD4P1-202ENST00000433066 EP400Q96L91 3159 aa11.57□□□□□ -0.56
SMPD4P1-202ENST00000433066 KANK1Q14678 1352 aa11.57□□□□□ -0.56
SMPD4P1-202ENST00000433066 NUTM2BA6NNL0 878 aaPredicted RBP11.57□□□□□ -0.56
SMPD4P1-202ENST00000433066 NUTM2EB1AL46 878 aaPredicted RBP11.57□□□□□ -0.56
SMPD4P1-202ENST00000433066 RBM6P78332 1123 aaKnown RBP11.57□□□□□ -0.56
SMPD4P1-202ENST00000433066 NUTM2AQ8IVF1 878 aaPredicted RBP11.57□□□□□ -0.56
SMPD4P1-202ENST00000433066 SLC52A1Q9NWF4 448 aa11.57□□□□□ -0.56
SMPD4P1-202ENST00000433066 SETBP1Q9Y6X0 1596 aa11.57□□□□□ -0.56
SMPD4P1-202ENST00000433066 ASXL1Q8IXJ9 1541 aa11.56□□□□□ -0.56
SMPD4P1-202ENST00000433066 CROCC2H7BZ55 1655 aa11.56□□□□□ -0.56
SMPD4P1-202ENST00000433066 DCCP43146 1447 aa11.55□□□□□ -0.56
SMPD4P1-202ENST00000433066 KANK4Q5T7N3 995 aaPredicted RBP11.55□□□□□ -0.56
SMPD4P1-202ENST00000433066 BCANQ96GW7 911 aa11.55□□□□□ -0.56
SMPD4P1-202ENST00000433066 QTRT2Q9H974 415 aaKnown RBP11.55□□□□□ -0.56
SMPD4P1-202ENST00000433066 PIK3R4Q99570 1358 aa11.54□□□□□ -0.56
SMPD4P1-202ENST00000433066 PTPRUQ92729 1446 aa11.54□□□□□ -0.56
SMPD4P1-202ENST00000433066 TMEM131LA2VDJ0 1609 aa11.54□□□□□ -0.56
SMPD4P1-202ENST00000433066 ATF3P18847 181 aa11.54□□□□□ -0.56
SMPD4P1-202ENST00000433066 ATAD2Q6PL18 1390 aa11.54□□□□□ -0.56
SMPD4P1-202ENST00000433066 PNPLA6Q8IY17 1366 aa11.54□□□□□ -0.56
SMPD4P1-202ENST00000433066 NHSL1Q5SYE7 1610 aa11.53□□□□□ -0.56
SMPD4P1-202ENST00000433066 MST1RQ04912 1400 aa11.53□□□□□ -0.56
SMPD4P1-202ENST00000433066 RPRD2Q5VT52 1461 aaKnown RBP11.53□□□□□ -0.56
SMPD4P1-202ENST00000433066 DAPK1P53355 1430 aa11.52□□□□□ -0.56
SMPD4P1-202ENST00000433066 C14orf37Q86TY3 774 aa11.52□□□□□ -0.57
SMPD4P1-202ENST00000433066 C8orf37Q96NL8 207 aa11.52□□□□□ -0.57
SMPD4P1-202ENST00000433066 NUTM2DQ5VT03 806 aaPredicted RBP11.51□□□□□ -0.57
SMPD4P1-202ENST00000433066 MYO5BQ9ULV0 1848 aa11.51□□□□□ -0.57
SMPD4P1-202ENST00000433066 GCC2Q8IWJ2 1684 aa11.5□□□□□ -0.57
SMPD4P1-202ENST00000433066 PPP1R15AO75807 674 aaPredicted RBP11.5□□□□□ -0.57
SMPD4P1-202ENST00000433066 ZRANB1Q9UGI0 708 aa11.5□□□□□ -0.57
SMPD4P1-202ENST00000433066 VPS8Q8N3P4 1428 aa11.5□□□□□ -0.57
SMPD4P1-202ENST00000433066 DDX17Q92841 729 aaKnown RBP11.49□□□□□ -0.57
SMPD4P1-202ENST00000433066 LRRC59Q96AG4 307 aaKnown RBP11.49□□□□□ -0.57
SMPD4P1-202ENST00000433066 AMOTL2Q9Y2J4 779 aa11.49□□□□□ -0.57
SMPD4P1-202ENST00000433066 ANKRD30AQ9BXX3 1397 aa11.49□□□□□ -0.57
SMPD4P1-202ENST00000433066 TRPM2O94759 1503 aa11.49□□□□□ -0.57
SMPD4P1-202ENST00000433066 HDGFP51858 240 aaKnown RBP11.48□□□□□ -0.57
SMPD4P1-202ENST00000433066 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMPD4P1-202ENST00000433066 ATRNO75882 1429 aa11.48□□□□□ -0.57
SMPD4P1-202ENST00000433066 PTPN23Q9H3S7 1636 aa11.48□□□□□ -0.57
SMPD4P1-202ENST00000433066 XRN1Q8IZH2 1706 aaKnown RBP11.48□□□□□ -0.57
SMPD4P1-202ENST00000433066 NGLY1Q96IV0 654 aa11.47□□□□□ -0.57
SMPD4P1-202ENST00000433066 UNC13BO14795 1591 aa11.46□□□□□ -0.57
SMPD4P1-202ENST00000433066 ADGRL2O95490 1459 aa11.46□□□□□ -0.57
SMPD4P1-202ENST00000433066 FNBP4Q8N3X1 1017 aaPredicted RBP11.46□□□□□ -0.57
SMPD4P1-202ENST00000433066 LAMC1P11047 1609 aa11.46□□□□□ -0.58
SMPD4P1-202ENST00000433066 NRXN3Q9Y4C0 1643 aa11.46□□□□□ -0.58
SMPD4P1-202ENST00000433066 ADAMTS2O95450 1211 aa11.45□□□□□ -0.58
SMPD4P1-202ENST00000433066 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
SMPD4P1-202ENST00000433066 TRPC5Q9UL62 973 aaPredicted RBP11.44□□□□□ -0.58
SMPD4P1-202ENST00000433066 PTCH1Q13635 1447 aa11.43□□□□□ -0.58
SMPD4P1-202ENST00000433066 ADGRL3Q9HAR2 1447 aa11.43□□□□□ -0.58
SMPD4P1-202ENST00000433066 CCDC125Q86Z20 511 aa11.43□□□□□ -0.58
SMPD4P1-202ENST00000433066 USP21Q9UK80 565 aa11.43□□□□□ -0.58
SMPD4P1-202ENST00000433066 METP08581 1390 aa11.42□□□□□ -0.58
SMPD4P1-202ENST00000433066 SOS2Q07890 1332 aaPredicted RBP11.42□□□□□ -0.58
SMPD4P1-202ENST00000433066 C1orf167Q5SNV9 1468 aa11.42□□□□□ -0.58
SMPD4P1-202ENST00000433066 ANKRD50Q9ULJ7 1429 aa11.42□□□□□ -0.58
SMPD4P1-202ENST00000433066 MYOM2P54296 1465 aa11.41□□□□□ -0.58
SMPD4P1-202ENST00000433066 BCL9LQ86UU0 1499 aa11.41□□□□□ -0.58
SMPD4P1-202ENST00000433066 LRP5O75197 1615 aa11.41□□□□□ -0.58
SMPD4P1-202ENST00000433066 COL22A1Q8NFW1 1626 aaPredicted RBP11.4□□□□□ -0.58
SMPD4P1-202ENST00000433066 CHGAP10645 457 aaKnown RBP11.4□□□□□ -0.58
SMPD4P1-202ENST00000433066 NALCNQ8IZF0 1738 aa11.4□□□□□ -0.58
SMPD4P1-202ENST00000433066 E9PCH4 1651 aa11.39□□□□□ -0.59
SMPD4P1-202ENST00000433066 BLMP54132 1417 aaPredicted RBP11.38□□□□□ -0.59
SMPD4P1-202ENST00000433066 DEFB132Q7Z7B7 95 aa11.36□□□□□ -0.59
SMPD4P1-202ENST00000433066 ORAI2Q96SN7 254 aa11.36□□□□□ -0.59
SMPD4P1-202ENST00000433066 IQGAP3Q86VI3 1631 aa11.35□□□□□ -0.59
SMPD4P1-202ENST00000433066 GJD4Q96KN9 370 aaPredicted RBP11.35□□□□□ -0.59
SMPD4P1-202ENST00000433066 PRAG1Q86YV5 1406 aa11.35□□□□□ -0.59
SMPD4P1-202ENST00000433066 GLI3P10071 1580 aa11.34□□□□□ -0.59
SMPD4P1-202ENST00000433066 RALGAPBQ86X10 1494 aa11.33□□□□□ -0.6
SMPD4P1-202ENST00000433066 PXDNQ92626 1479 aa11.33□□□□□ -0.6
SMPD4P1-202ENST00000433066 ROBO2Q9HCK4 1378 aa11.32□□□□□ -0.6
SMPD4P1-202ENST00000433066 SLIT2O94813 1529 aa11.32□□□□□ -0.6
SMPD4P1-202ENST00000433066 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms