RNA–Protein interactions for RNA: ENST00000433061.1

LINC01278-201, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 3 BASIC

Gene LINC01278, Length 529 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-201ENST00000433061 NWD1Q149M9 1564 aa20.26■□□□□ 0.83
LINC01278-201ENST00000433061 C8orf37Q96NL8 207 aa20.26■□□□□ 0.83
LINC01278-201ENST00000433061 ATAD2Q6PL18 1390 aa20.25■□□□□ 0.83
LINC01278-201ENST00000433061 MROH1Q8NDA8 1641 aa20.24■□□□□ 0.83
LINC01278-201ENST00000433061 EFCAB6Q5THR3 1501 aa20.23■□□□□ 0.83
LINC01278-201ENST00000433061 EHBP1L1Q8N3D4 1523 aa20.23■□□□□ 0.83
LINC01278-201ENST00000433061 KDM5AP29375 1690 aaKnown RBP20.23■□□□□ 0.83
LINC01278-201ENST00000433061 CEP162Q5TB80 1403 aa20.23■□□□□ 0.83
LINC01278-201ENST00000433061 AHDC1Q5TGY3 1603 aaPredicted RBP20.23■□□□□ 0.83
LINC01278-201ENST00000433061 ATF3P18847 181 aa20.22■□□□□ 0.83
LINC01278-201ENST00000433061 IDI1Q13907 227 aa20.21■□□□□ 0.83
LINC01278-201ENST00000433061 CADPS2Q86UW7 1296 aa20.2■□□□□ 0.82
LINC01278-201ENST00000433061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.2■□□□□ 0.82
LINC01278-201ENST00000433061 EIF2AK4Q9P2K8 1649 aaKnown RBP20.2■□□□□ 0.82
LINC01278-201ENST00000433061 ARHGAP31Q2M1Z3 1444 aa20.19■□□□□ 0.82
LINC01278-201ENST00000433061 NGLY1Q96IV0 654 aa20.19■□□□□ 0.82
LINC01278-201ENST00000433061 ARHGEF5Q12774 1597 aa20.19■□□□□ 0.82
LINC01278-201ENST00000433061 BRINP3Q76B58 766 aa20.16■□□□□ 0.82
LINC01278-201ENST00000433061 DIP2AQ14689 1571 aa20.16■□□□□ 0.82
LINC01278-201ENST00000433061 C19orf44Q9H6X5 657 aa20.15■□□□□ 0.82
LINC01278-201ENST00000433061 PPP1R15AO75807 674 aaPredicted RBP20.13■□□□□ 0.81
LINC01278-201ENST00000433061 NCOA3Q9Y6Q9 1424 aa20.12■□□□□ 0.81
LINC01278-201ENST00000433061 ADAMTS2O95450 1211 aa20.12■□□□□ 0.81
LINC01278-201ENST00000433061 MAST1Q9Y2H9 1570 aa20.11■□□□□ 0.81
LINC01278-201ENST00000433061 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.1■□□□□ 0.81
LINC01278-201ENST00000433061 EP400Q96L91 3159 aa20.1■□□□□ 0.81
LINC01278-201ENST00000433061 LRRC59Q96AG4 307 aaKnown RBP20.1■□□□□ 0.81
LINC01278-201ENST00000433061 CHD2O14647 1828 aaKnown RBP20.1■□□□□ 0.81
LINC01278-201ENST00000433061 SETD5Q9C0A6 1442 aa20.08■□□□□ 0.8
LINC01278-201ENST00000433061 PLEKHG1Q9ULL1 1385 aa20.08■□□□□ 0.8
LINC01278-201ENST00000433061 ADGRB3O60242 1522 aa20.07■□□□□ 0.8
LINC01278-201ENST00000433061 DUOX2Q9NRD8 1548 aa20.07■□□□□ 0.8
LINC01278-201ENST00000433061 CCDC125Q86Z20 511 aa20.07■□□□□ 0.8
LINC01278-201ENST00000433061 USP21Q9UK80 565 aa20.07■□□□□ 0.8
LINC01278-201ENST00000433061 KANK1Q14678 1352 aa20.07■□□□□ 0.8
LINC01278-201ENST00000433061 DDX17Q92841 729 aaKnown RBP20.05■□□□□ 0.8
LINC01278-201ENST00000433061 TRPC5Q9UL62 973 aaPredicted RBP20.05■□□□□ 0.8
LINC01278-201ENST00000433061 TBX22Q9Y458 520 aa20.05■□□□□ 0.8
LINC01278-201ENST00000433061 ASXL1Q8IXJ9 1541 aa20.04■□□□□ 0.8
LINC01278-201ENST00000433061 RRP7BPQ9NSQ0 103 aa20.04■□□□□ 0.8
LINC01278-201ENST00000433061 PNPLA6Q8IY17 1366 aa20.04■□□□□ 0.8
LINC01278-201ENST00000433061 HDGFP51858 240 aaKnown RBP20.03■□□□□ 0.8
LINC01278-201ENST00000433061 KIF15Q9NS87 1388 aa20.02■□□□□ 0.8
LINC01278-201ENST00000433061 SLC52A1Q9NWF4 448 aa20.01■□□□□ 0.79
LINC01278-201ENST00000433061 RIMS2Q9UQ26 1411 aa20.01■□□□□ 0.79
LINC01278-201ENST00000433061 ZFYVE9O95405 1425 aa20■□□□□ 0.79
LINC01278-201ENST00000433061 ERBINQ96RT1 1412 aa19.98■□□□□ 0.79
LINC01278-201ENST00000433061 NOS1P29475 1434 aa19.97■□□□□ 0.79
LINC01278-201ENST00000433061 AMOTL2Q9Y2J4 779 aa19.97■□□□□ 0.79
LINC01278-201ENST00000433061 CHGAP10645 457 aaKnown RBP19.96■□□□□ 0.79
LINC01278-201ENST00000433061 DEFB132Q7Z7B7 95 aa19.96■□□□□ 0.79
LINC01278-201ENST00000433061 NHSL1Q5SYE7 1610 aa19.95■□□□□ 0.78
LINC01278-201ENST00000433061 MST1RQ04912 1400 aa19.94■□□□□ 0.78
LINC01278-201ENST00000433061 LRP5O75197 1615 aa19.94■□□□□ 0.78
LINC01278-201ENST00000433061 ATRNO75882 1429 aa19.93■□□□□ 0.78
LINC01278-201ENST00000433061 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.93■□□□□ 0.78
LINC01278-201ENST00000433061 DCCP43146 1447 aa19.93■□□□□ 0.78
LINC01278-201ENST00000433061 ADAMTS13Q76LX8 1427 aa19.93■□□□□ 0.78
LINC01278-201ENST00000433061 FNBP4Q8N3X1 1017 aaPredicted RBP19.92■□□□□ 0.78
LINC01278-201ENST00000433061 PIK3R4Q99570 1358 aa19.92■□□□□ 0.78
LINC01278-201ENST00000433061 LMTK2Q8IWU2 1503 aa19.92■□□□□ 0.78
LINC01278-201ENST00000433061 PSDA5PKW4 1024 aaPredicted RBP19.91■□□□□ 0.78
LINC01278-201ENST00000433061 SF3B2Q13435 895 aaKnown RBP19.91■□□□□ 0.78
LINC01278-201ENST00000433061 BLMP54132 1417 aaPredicted RBP19.91■□□□□ 0.78
LINC01278-201ENST00000433061 MYOM3Q5VTT5 1437 aa19.91■□□□□ 0.78
LINC01278-201ENST00000433061 MYO5BQ9ULV0 1848 aa19.89■□□□□ 0.77
LINC01278-201ENST00000433061 PTPRUQ92729 1446 aa19.88■□□□□ 0.77
LINC01278-201ENST00000433061 GCC2Q8IWJ2 1684 aa19.86■□□□□ 0.77
LINC01278-201ENST00000433061 PTCH1Q13635 1447 aa19.85■□□□□ 0.77
LINC01278-201ENST00000433061 HRCP23327 699 aa19.85■□□□□ 0.77
LINC01278-201ENST00000433061 YY1P25490 414 aa19.85■□□□□ 0.77
LINC01278-201ENST00000433061 GJD4Q96KN9 370 aaPredicted RBP19.85■□□□□ 0.77
LINC01278-201ENST00000433061 TRPM2O94759 1503 aa19.85■□□□□ 0.77
LINC01278-201ENST00000433061 ABCC5O15440 1437 aa19.83■□□□□ 0.76
LINC01278-201ENST00000433061 TMEM131LA2VDJ0 1609 aa19.83■□□□□ 0.76
LINC01278-201ENST00000433061 CHIC2Q9UKJ5 165 aa19.82■□□□□ 0.76
LINC01278-201ENST00000433061 BCL9LQ86UU0 1499 aa19.8■□□□□ 0.76
LINC01278-201ENST00000433061 SOS2Q07890 1332 aaPredicted RBP19.77■□□□□ 0.76
LINC01278-201ENST00000433061 RPRD2Q5VT52 1461 aaKnown RBP19.77■□□□□ 0.76
LINC01278-201ENST00000433061 CROCC2H7BZ55 1655 aa19.76■□□□□ 0.75
LINC01278-201ENST00000433061 C1orf167Q5SNV9 1468 aa19.76■□□□□ 0.75
LINC01278-201ENST00000433061 ORAI2Q96SN7 254 aa19.76■□□□□ 0.75
LINC01278-201ENST00000433061 ADGRL3Q9HAR2 1447 aa19.76■□□□□ 0.75
LINC01278-201ENST00000433061 ANKRD30AQ9BXX3 1397 aa19.75■□□□□ 0.75
LINC01278-201ENST00000433061 KANK4Q5T7N3 995 aaPredicted RBP19.74■□□□□ 0.75
LINC01278-201ENST00000433061 DAPK1P53355 1430 aa19.73■□□□□ 0.75
LINC01278-201ENST00000433061 BAG6P46379 1132 aa19.72■□□□□ 0.75
LINC01278-201ENST00000433061 XRN1Q8IZH2 1706 aaKnown RBP19.72■□□□□ 0.75
LINC01278-201ENST00000433061 RALGAPBQ86X10 1494 aa19.72■□□□□ 0.75
LINC01278-201ENST00000433061 UNC13BO14795 1591 aa19.71■□□□□ 0.75
LINC01278-201ENST00000433061 R3HDM1Q15032 1099 aaKnown RBP19.71■□□□□ 0.75
LINC01278-201ENST00000433061 SEPT12Q8IYM1 358 aa19.71■□□□□ 0.75
LINC01278-201ENST00000433061 UNC5CLQ8IV45 518 aa19.7■□□□□ 0.74
LINC01278-201ENST00000433061 METP08581 1390 aa19.7■□□□□ 0.74
LINC01278-201ENST00000433061 MYOM2P54296 1465 aa19.69■□□□□ 0.74
LINC01278-201ENST00000433061 GLI3P10071 1580 aa19.68■□□□□ 0.74
LINC01278-201ENST00000433061 NALCNQ8IZF0 1738 aa19.68■□□□□ 0.74
LINC01278-201ENST00000433061 COL22A1Q8NFW1 1626 aaPredicted RBP19.67■□□□□ 0.74
LINC01278-201ENST00000433061 BRWD3Q6RI45 1802 aa19.67■□□□□ 0.74
LINC01278-201ENST00000433061 LAMC1P11047 1609 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms