RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 CFAP65Q6ZU64 1925 aaKnown RBP11.32□□□□□ -0.6
HDAC9-212ENST00000432645 SENP3Q9H4L4 574 aaPredicted RBP11.32□□□□□ -0.6
HDAC9-212ENST00000432645 MADDQ8WXG6 1647 aa11.32□□□□□ -0.6
HDAC9-212ENST00000432645 NUTM2DQ5VT03 806 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-212ENST00000432645 TMC1Q8TDI8 760 aa11.31□□□□□ -0.6
HDAC9-212ENST00000432645 MAP3K4Q9Y6R4 1608 aa11.31□□□□□ -0.6
HDAC9-212ENST00000432645 PANK3Q9H999 370 aa11.31□□□□□ -0.6
HDAC9-212ENST00000432645 CC2D1BQ5T0F9 858 aaKnown RBP11.3□□□□□ -0.6
HDAC9-212ENST00000432645 RNF17Q9BXT8 1623 aaKnown RBP11.3□□□□□ -0.6
HDAC9-212ENST00000432645 STAC3Q96MF2 364 aa11.3□□□□□ -0.6
HDAC9-212ENST00000432645 COL17A1Q9UMD9 1497 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-212ENST00000432645 LMTK2Q8IWU2 1503 aa11.29□□□□□ -0.6
HDAC9-212ENST00000432645 DIP2CQ9Y2E4 1556 aa11.29□□□□□ -0.6
HDAC9-212ENST00000432645 LAMC1P11047 1609 aa11.28□□□□□ -0.6
HDAC9-212ENST00000432645 PER1O15534 1290 aaPredicted RBP11.28□□□□□ -0.6
HDAC9-212ENST00000432645 TSPOAP1O95153 1857 aa11.28□□□□□ -0.6
HDAC9-212ENST00000432645 ABCC3O15438 1527 aa11.28□□□□□ -0.6
HDAC9-212ENST00000432645 NOS1P29475 1434 aa11.28□□□□□ -0.6
HDAC9-212ENST00000432645 RICTORQ6R327 1708 aa11.28□□□□□ -0.6
HDAC9-212ENST00000432645 SCAF11Q99590 1463 aaKnown RBP11.27□□□□□ -0.6
HDAC9-212ENST00000432645 NEFLP07196 543 aa11.27□□□□□ -0.61
HDAC9-212ENST00000432645 GLI2P10070 1586 aa11.26□□□□□ -0.61
HDAC9-212ENST00000432645 DIP2BQ9P265 1576 aa11.26□□□□□ -0.61
HDAC9-212ENST00000432645 MYBBP1AQ9BQG0 1328 aaKnown RBP11.26□□□□□ -0.61
HDAC9-212ENST00000432645 RALBP1Q15311 655 aa11.26□□□□□ -0.61
HDAC9-212ENST00000432645 MROH2AA6NES4 1674 aa11.26□□□□□ -0.61
HDAC9-212ENST00000432645 KTN1Q86UP2 1357 aaKnown RBP11.26□□□□□ -0.61
HDAC9-212ENST00000432645 TMEM132EQ6IEE7 984 aa11.26□□□□□ -0.61
HDAC9-212ENST00000432645 PNISRQ8TF01 805 aaKnown RBP11.26□□□□□ -0.61
HDAC9-212ENST00000432645 KIF1BO60333 1816 aa11.26□□□□□ -0.61
HDAC9-212ENST00000432645 IRX6P78412 446 aaPredicted RBP11.25□□□□□ -0.61
HDAC9-212ENST00000432645 MLECQ14165 292 aa11.25□□□□□ -0.61
HDAC9-212ENST00000432645 KLHL34Q8N239 644 aa11.25□□□□□ -0.61
HDAC9-212ENST00000432645 IDI1Q13907 227 aa11.25□□□□□ -0.61
HDAC9-212ENST00000432645 TRAK1Q9UPV9 953 aa11.25□□□□□ -0.61
HDAC9-212ENST00000432645 FBXO31Q5XUX0 539 aaPredicted RBP11.24□□□□□ -0.61
HDAC9-212ENST00000432645 ZBED9Q6R2W3 1325 aa11.24□□□□□ -0.61
HDAC9-212ENST00000432645 MYOM2P54296 1465 aa11.24□□□□□ -0.61
HDAC9-212ENST00000432645 EIF3AQ14152 1382 aaKnown RBP11.23□□□□□ -0.61
HDAC9-212ENST00000432645 SALL2Q9Y467 1007 aaPredicted RBP11.23□□□□□ -0.61
HDAC9-212ENST00000432645 IQGAP1P46940 1657 aa11.23□□□□□ -0.61
HDAC9-212ENST00000432645 ADGRB3O60242 1522 aa11.23□□□□□ -0.61
HDAC9-212ENST00000432645 CAMSAP1Q5T5Y3 1602 aa11.23□□□□□ -0.61
HDAC9-212ENST00000432645 ERICH6BQ5W0A0 696 aa11.22□□□□□ -0.61
HDAC9-212ENST00000432645 CDCA8Q53HL2 280 aa11.22□□□□□ -0.61
HDAC9-212ENST00000432645 SIGLEC1Q9BZZ2 1709 aa11.22□□□□□ -0.61
HDAC9-212ENST00000432645 NLRP13Q86W25 1043 aa11.22□□□□□ -0.61
HDAC9-212ENST00000432645 KNSTRNQ9Y448 316 aa11.22□□□□□ -0.61
HDAC9-212ENST00000432645 PARD3Q8TEW0 1356 aa11.22□□□□□ -0.61
HDAC9-212ENST00000432645 NEURL4Q96JN8 1562 aa11.21□□□□□ -0.61
HDAC9-212ENST00000432645 ADRA2BP18089 450 aa11.21□□□□□ -0.61
HDAC9-212ENST00000432645 KCNA4P22459 653 aa11.21□□□□□ -0.61
HDAC9-212ENST00000432645 BRD4O60885 1362 aaPredicted RBP11.21□□□□□ -0.61
HDAC9-212ENST00000432645 C14orf93Q9H972 538 aaKnown RBP11.2□□□□□ -0.62
HDAC9-212ENST00000432645 SYNMO15061 1565 aa11.2□□□□□ -0.62
HDAC9-212ENST00000432645 VGFO15240 615 aaPredicted RBP11.19□□□□□ -0.62
HDAC9-212ENST00000432645 NRXN1Q9ULB1 1477 aa11.19□□□□□ -0.62
HDAC9-212ENST00000432645 PIK3C2GO75747 1445 aa11.19□□□□□ -0.62
HDAC9-212ENST00000432645 RPGRIP1LQ68CZ1 1315 aa11.19□□□□□ -0.62
HDAC9-212ENST00000432645 IFT172Q9UG01 1749 aa11.19□□□□□ -0.62
HDAC9-212ENST00000432645 CENPJQ9HC77 1338 aaPredicted RBP11.18□□□□□ -0.62
HDAC9-212ENST00000432645 SLC52A1Q9NWF4 448 aa11.18□□□□□ -0.62
HDAC9-212ENST00000432645 SAFB2Q14151 953 aaKnown RBP eCLIP11.18□□□□□ -0.62
HDAC9-212ENST00000432645 STAG3Q9UJ98 1225 aa11.18□□□□□ -0.62
HDAC9-212ENST00000432645 ARHGAP31Q2M1Z3 1444 aa11.18□□□□□ -0.62
HDAC9-212ENST00000432645 KIAA1210Q9ULL0 1709 aa11.17□□□□□ -0.62
HDAC9-212ENST00000432645 ZMYM4Q5VZL5 1548 aa11.17□□□□□ -0.62
HDAC9-212ENST00000432645 STK26Q9P289 416 aa11.17□□□□□ -0.62
HDAC9-212ENST00000432645 AMER1Q5JTC6 1135 aaPredicted RBP11.17□□□□□ -0.62
HDAC9-212ENST00000432645 ERVK-7P63135 1459 aa11.16□□□□□ -0.62
HDAC9-212ENST00000432645 LRPPRCP42704 1394 aaKnown RBP11.16□□□□□ -0.62
HDAC9-212ENST00000432645 PPLO60437 1756 aa11.16□□□□□ -0.62
HDAC9-212ENST00000432645 PDIA4P13667 645 aaKnown RBP11.15□□□□□ -0.62
HDAC9-212ENST00000432645 PIK3C2BO00750 1634 aa11.15□□□□□ -0.63
HDAC9-212ENST00000432645 CARD14Q9BXL6 1004 aa11.15□□□□□ -0.63
HDAC9-212ENST00000432645 NEXMIFQ5QGS0 1516 aa11.14□□□□□ -0.63
HDAC9-212ENST00000432645 ZC3H13Q5T200 1668 aaKnown RBP11.14□□□□□ -0.63
HDAC9-212ENST00000432645 PPP2R1AP30153 589 aa11.14□□□□□ -0.63
HDAC9-212ENST00000432645 CCDC136Q96JN2 1154 aa11.14□□□□□ -0.63
HDAC9-212ENST00000432645 SLC12A5Q9H2X9 1139 aa11.14□□□□□ -0.63
HDAC9-212ENST00000432645 ADGRB1O14514 1584 aa11.13□□□□□ -0.63
HDAC9-212ENST00000432645 ESF1Q9H501 851 aaKnown RBP11.13□□□□□ -0.63
HDAC9-212ENST00000432645 PREX1Q8TCU6 1659 aa11.12□□□□□ -0.63
HDAC9-212ENST00000432645 NUDCQ9Y266 331 aa11.12□□□□□ -0.63
HDAC9-212ENST00000432645 SETBP1Q9Y6X0 1596 aa11.12□□□□□ -0.63
HDAC9-212ENST00000432645 KDM5AP29375 1690 aaKnown RBP11.12□□□□□ -0.63
HDAC9-212ENST00000432645 KIF13AQ9H1H9 1805 aa11.11□□□□□ -0.63
HDAC9-212ENST00000432645 ADAMTS8Q9UP79 889 aa11.11□□□□□ -0.63
HDAC9-212ENST00000432645 MYOM1P52179 1685 aa11.11□□□□□ -0.63
HDAC9-212ENST00000432645 TNNT2P45379 298 aaPredicted RBP11.1□□□□□ -0.63
HDAC9-212ENST00000432645 ASXL1Q8IXJ9 1541 aa11.1□□□□□ -0.63
HDAC9-212ENST00000432645 SMG6Q86US8 1419 aaKnown RBP11.1□□□□□ -0.63
HDAC9-212ENST00000432645 SBNO2Q9Y2G9 1366 aa11.1□□□□□ -0.63
HDAC9-212ENST00000432645 PDE4CQ08493 712 aa11.1□□□□□ -0.63
HDAC9-212ENST00000432645 CABP2Q9NPB3 220 aa11.1□□□□□ -0.63
HDAC9-212ENST00000432645 MYO5BQ9ULV0 1848 aa11.1□□□□□ -0.63
HDAC9-212ENST00000432645 CLTCQ00610 1675 aaKnown RBP11.09□□□□□ -0.63
HDAC9-212ENST00000432645 TMEM131LA2VDJ0 1609 aa11.09□□□□□ -0.63
HDAC9-212ENST00000432645 PPP6R1Q9UPN7 881 aa11.09□□□□□ -0.63
HDAC9-212ENST00000432645 WDR43Q15061 677 aaKnown RBP eCLIP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms