RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 C19orf44Q9H6X5 657 aa25.15■■□□□ 1.62
NUP50-209ENST00000432340 SLC52A1Q9NWF4 448 aa25.15■■□□□ 1.62
NUP50-209ENST00000432340 KDM5AP29375 1690 aaKnown RBP25.15■■□□□ 1.62
NUP50-209ENST00000432340 PIK3C2BO00750 1634 aa25.15■■□□□ 1.62
NUP50-209ENST00000432340 AFF2P51816 1311 aa25.14■■□□□ 1.62
NUP50-209ENST00000432340 NUTM2BA6NNL0 878 aaPredicted RBP25.14■■□□□ 1.62
NUP50-209ENST00000432340 NUTM2EB1AL46 878 aaPredicted RBP25.14■■□□□ 1.62
NUP50-209ENST00000432340 NUTM2AQ8IVF1 878 aaPredicted RBP25.14■■□□□ 1.62
NUP50-209ENST00000432340 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.14■■□□□ 1.62
NUP50-209ENST00000432340 NUTM2DQ5VT03 806 aaPredicted RBP25.13■■□□□ 1.61
NUP50-209ENST00000432340 ERBINQ96RT1 1412 aa25.12■■□□□ 1.61
NUP50-209ENST00000432340 PPP1R15AO75807 674 aaPredicted RBP25.12■■□□□ 1.61
NUP50-209ENST00000432340 NGLY1Q96IV0 654 aa25.12■■□□□ 1.61
NUP50-209ENST00000432340 AHDC1Q5TGY3 1603 aaPredicted RBP25.11■■□□□ 1.61
NUP50-209ENST00000432340 CEP152O94986 1710 aa25.1■■□□□ 1.61
NUP50-209ENST00000432340 KIF15Q9NS87 1388 aa25.09■■□□□ 1.61
NUP50-209ENST00000432340 ATAD2Q6PL18 1390 aa25.08■■□□□ 1.61
NUP50-209ENST00000432340 PLEKHG1Q9ULL1 1385 aa25.08■■□□□ 1.61
NUP50-209ENST00000432340 QTRT2Q9H974 415 aaKnown RBP25.08■■□□□ 1.61
NUP50-209ENST00000432340 TBX22Q9Y458 520 aa25.08■■□□□ 1.61
NUP50-209ENST00000432340 MYOM3Q5VTT5 1437 aa25.08■■□□□ 1.61
NUP50-209ENST00000432340 SHPRHQ149N8 1683 aa25.06■■□□□ 1.6
NUP50-209ENST00000432340 RGS12O14924 1447 aa25.03■■□□□ 1.6
NUP50-209ENST00000432340 ADGRB3O60242 1522 aa25.03■■□□□ 1.6
NUP50-209ENST00000432340 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.03■■□□□ 1.6
NUP50-209ENST00000432340 LRRC59Q96AG4 307 aaKnown RBP25.03■■□□□ 1.6
NUP50-209ENST00000432340 CFAP65Q6ZU64 1925 aaKnown RBP25.02■■□□□ 1.6
NUP50-209ENST00000432340 C8orf37Q96NL8 207 aa25.02■■□□□ 1.6
NUP50-209ENST00000432340 BRINP3Q76B58 766 aa25.01■■□□□ 1.59
NUP50-209ENST00000432340 RRP7BPQ9NSQ0 103 aa25.01■■□□□ 1.59
NUP50-209ENST00000432340 PIK3R4Q99570 1358 aa25.01■■□□□ 1.59
NUP50-209ENST00000432340 SRCAPQ6ZRS2 3230 aa25■■□□□ 1.59
NUP50-209ENST00000432340 NOS1P29475 1434 aa25■■□□□ 1.59
NUP50-209ENST00000432340 CCDC125Q86Z20 511 aa24.99■■□□□ 1.59
NUP50-209ENST00000432340 LMTK2Q8IWU2 1503 aa24.99■■□□□ 1.59
NUP50-209ENST00000432340 SETD5Q9C0A6 1442 aa24.99■■□□□ 1.59
NUP50-209ENST00000432340 ZFYVE9O95405 1425 aa24.95■■□□□ 1.58
NUP50-209ENST00000432340 DCCP43146 1447 aa24.95■■□□□ 1.58
NUP50-209ENST00000432340 RIMS2Q9UQ26 1411 aa24.95■■□□□ 1.58
NUP50-209ENST00000432340 DIP2AQ14689 1571 aa24.91■■□□□ 1.58
NUP50-209ENST00000432340 RPRD2Q5VT52 1461 aaKnown RBP24.89■■□□□ 1.58
NUP50-209ENST00000432340 TRPC5Q9UL62 973 aaPredicted RBP24.89■■□□□ 1.58
NUP50-209ENST00000432340 CHD2O14647 1828 aaKnown RBP24.89■■□□□ 1.57
NUP50-209ENST00000432340 ANKRD30AQ9BXX3 1397 aa24.88■■□□□ 1.57
NUP50-209ENST00000432340 AMOTL2Q9Y2J4 779 aa24.86■■□□□ 1.57
NUP50-209ENST00000432340 ASXL1Q8IXJ9 1541 aa24.86■■□□□ 1.57
NUP50-209ENST00000432340 ABCC5O15440 1437 aa24.86■■□□□ 1.57
NUP50-209ENST00000432340 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.85■■□□□ 1.57
NUP50-209ENST00000432340 PNPLA6Q8IY17 1366 aa24.84■■□□□ 1.57
NUP50-209ENST00000432340 USP21Q9UK80 565 aa24.84■■□□□ 1.57
NUP50-209ENST00000432340 ADAMTS2O95450 1211 aa24.83■■□□□ 1.57
NUP50-209ENST00000432340 CHGAP10645 457 aaKnown RBP24.82■■□□□ 1.56
NUP50-209ENST00000432340 ADAMTS13Q76LX8 1427 aa24.82■■□□□ 1.56
NUP50-209ENST00000432340 SETBP1Q9Y6X0 1596 aa24.78■■□□□ 1.56
NUP50-209ENST00000432340 MST1RQ04912 1400 aa24.78■■□□□ 1.56
NUP50-209ENST00000432340 TRPM2O94759 1503 aa24.77■■□□□ 1.56
NUP50-209ENST00000432340 DAPK1P53355 1430 aa24.77■■□□□ 1.56
NUP50-209ENST00000432340 FNBP4Q8N3X1 1017 aaPredicted RBP24.76■■□□□ 1.55
NUP50-209ENST00000432340 PTCH1Q13635 1447 aa24.74■■□□□ 1.55
NUP50-209ENST00000432340 KANK4Q5T7N3 995 aaPredicted RBP24.71■■□□□ 1.55
NUP50-209ENST00000432340 CHIC2Q9UKJ5 165 aa24.71■■□□□ 1.55
NUP50-209ENST00000432340 SF3B2Q13435 895 aaKnown RBP24.7■■□□□ 1.54
NUP50-209ENST00000432340 NHSL1Q5SYE7 1610 aa24.7■■□□□ 1.54
NUP50-209ENST00000432340 VPS8Q8N3P4 1428 aa24.69■■□□□ 1.54
NUP50-209ENST00000432340 TMEM131LA2VDJ0 1609 aa24.69■■□□□ 1.54
NUP50-209ENST00000432340 ATRNO75882 1429 aa24.69■■□□□ 1.54
NUP50-209ENST00000432340 BLMP54132 1417 aaPredicted RBP24.67■■□□□ 1.54
NUP50-209ENST00000432340 CROCC2H7BZ55 1655 aa24.66■■□□□ 1.54
NUP50-209ENST00000432340 DDX17Q92841 729 aaKnown RBP24.66■■□□□ 1.54
NUP50-209ENST00000432340 PTPRUQ92729 1446 aa24.66■■□□□ 1.54
NUP50-209ENST00000432340 ADGRL3Q9HAR2 1447 aa24.66■■□□□ 1.54
NUP50-209ENST00000432340 SOS2Q07890 1332 aaPredicted RBP24.63■■□□□ 1.53
NUP50-209ENST00000432340 ANKRD50Q9ULJ7 1429 aa24.62■■□□□ 1.53
NUP50-209ENST00000432340 GCC2Q8IWJ2 1684 aa24.62■■□□□ 1.53
NUP50-209ENST00000432340 PTPN23Q9H3S7 1636 aa24.61■■□□□ 1.53
NUP50-209ENST00000432340 APLP2Q06481 763 aa24.61■■□□□ 1.53
NUP50-209ENST00000432340 GJD4Q96KN9 370 aaPredicted RBP24.61■■□□□ 1.53
NUP50-209ENST00000432340 C1orf167Q5SNV9 1468 aa24.58■■□□□ 1.52
NUP50-209ENST00000432340 ADGRL2O95490 1459 aa24.56■■□□□ 1.52
NUP50-209ENST00000432340 LRP5O75197 1615 aa24.53■■□□□ 1.52
NUP50-209ENST00000432340 XRN1Q8IZH2 1706 aaKnown RBP24.52■■□□□ 1.52
NUP50-209ENST00000432340 BCL9LQ86UU0 1499 aa24.52■■□□□ 1.52
NUP50-209ENST00000432340 UNC13BO14795 1591 aa24.52■■□□□ 1.52
NUP50-209ENST00000432340 DEFB132Q7Z7B7 95 aa24.51■■□□□ 1.51
NUP50-209ENST00000432340 NPHP3Q7Z494 1330 aa24.51■■□□□ 1.51
NUP50-209ENST00000432340 METP08581 1390 aa24.51■■□□□ 1.51
NUP50-209ENST00000432340 MYO5BQ9ULV0 1848 aa24.5■■□□□ 1.51
NUP50-209ENST00000432340 ZNF326Q5BKZ1 582 aaKnown RBP24.49■■□□□ 1.51
NUP50-209ENST00000432340 ORAI2Q96SN7 254 aa24.49■■□□□ 1.51
NUP50-209ENST00000432340 UNC5CLQ8IV45 518 aa24.48■■□□□ 1.51
NUP50-209ENST00000432340 LAMC1P11047 1609 aa24.47■■□□□ 1.51
NUP50-209ENST00000432340 MYOM2P54296 1465 aa24.47■■□□□ 1.51
NUP50-209ENST00000432340 BAG6P46379 1132 aa24.46■■□□□ 1.51
NUP50-209ENST00000432340 LRPPRCP42704 1394 aaKnown RBP24.44■■□□□ 1.5
NUP50-209ENST00000432340 HRCP23327 699 aa24.44■■□□□ 1.5
NUP50-209ENST00000432340 EP400Q96L91 3159 aa24.42■■□□□ 1.5
NUP50-209ENST00000432340 RALGAPBQ86X10 1494 aa24.41■■□□□ 1.5
NUP50-209ENST00000432340 COL22A1Q8NFW1 1626 aaPredicted RBP24.41■■□□□ 1.5
NUP50-209ENST00000432340 FAM50AQ14320 339 aaKnown RBP24.4■■□□□ 1.5
NUP50-209ENST00000432340 SEPT12Q8IYM1 358 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 188.1 ms