RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 FHOD3Q2V2M9 1422 aa14.32□□□□□ -0.12
RIMKLA-202ENST00000431473 DHX57Q6P158 1386 aaKnown RBP14.31□□□□□ -0.12
RIMKLA-202ENST00000431473 NGDNQ8NEJ9 315 aaKnown RBP14.31□□□□□ -0.12
RIMKLA-202ENST00000431473 KAT6BQ8WYB5 2073 aa14.31□□□□□ -0.12
RIMKLA-202ENST00000431473 MROH2BQ7Z745 1585 aa14.31□□□□□ -0.12
RIMKLA-202ENST00000431473 NFKBIBQ15653 356 aa14.31□□□□□ -0.12
RIMKLA-202ENST00000431473 CCDC144AA2RUR9 1427 aa14.3□□□□□ -0.12
RIMKLA-202ENST00000431473 NASPP49321 788 aaPredicted RBP14.3□□□□□ -0.12
RIMKLA-202ENST00000431473 KIF3BO15066 747 aa14.3□□□□□ -0.12
RIMKLA-202ENST00000431473 CGNL1Q0VF96 1302 aa14.3□□□□□ -0.12
RIMKLA-202ENST00000431473 CHMP5Q9NZZ3 219 aa14.29□□□□□ -0.12
RIMKLA-202ENST00000431473 RAPGEF2Q9Y4G8 1499 aa14.29□□□□□ -0.12
RIMKLA-202ENST00000431473 CARMIL2Q6F5E8 1435 aa14.29□□□□□ -0.12
RIMKLA-202ENST00000431473 NGEFQ8N5V2 710 aa14.29□□□□□ -0.12
RIMKLA-202ENST00000431473 R3HCC1Q9Y3T6 440 aaKnown RBP14.29□□□□□ -0.12
RIMKLA-202ENST00000431473 VPS37CA5D8V6 355 aaPredicted RBP14.28□□□□□ -0.12
RIMKLA-202ENST00000431473 TRHP20396 242 aaPredicted RBP14.28□□□□□ -0.12
RIMKLA-202ENST00000431473 SASS6Q6UVJ0 657 aa14.28□□□□□ -0.12
RIMKLA-202ENST00000431473 DDX19BQ9UMR2 479 aa14.27□□□□□ -0.12
RIMKLA-202ENST00000431473 TRIM29Q14134 588 aa14.27□□□□□ -0.12
RIMKLA-202ENST00000431473 APAF1O14727 1248 aa14.27□□□□□ -0.12
RIMKLA-202ENST00000431473 C9orf78Q9NZ63 289 aaPredicted RBP14.27□□□□□ -0.12
RIMKLA-202ENST00000431473 IPO7O95373 1038 aaKnown RBP14.27□□□□□ -0.13
RIMKLA-202ENST00000431473 ZKSCAN1P17029 563 aaPredicted RBP14.27□□□□□ -0.13
RIMKLA-202ENST00000431473 APPP05067 770 aa14.26□□□□□ -0.13
RIMKLA-202ENST00000431473 RAD21O60216 631 aa14.26□□□□□ -0.13
RIMKLA-202ENST00000431473 C22orf23Q9BZE7 217 aa14.26□□□□□ -0.13
RIMKLA-202ENST00000431473 SYNE3Q6ZMZ3 975 aa14.26□□□□□ -0.13
RIMKLA-202ENST00000431473 EIF2S2P20042 333 aaKnown RBP14.26□□□□□ -0.13
RIMKLA-202ENST00000431473 GTF2E1P29083 439 aaPredicted RBP14.25□□□□□ -0.13
RIMKLA-202ENST00000431473 RUFY2Q8WXA3 655 aa14.25□□□□□ -0.13
RIMKLA-202ENST00000431473 RUFY1Q96T51 708 aa14.25□□□□□ -0.13
RIMKLA-202ENST00000431473 BRPF3Q9ULD4 1205 aa14.25□□□□□ -0.13
RIMKLA-202ENST00000431473 DZIP1LQ8IYY4 767 aaKnown RBP14.25□□□□□ -0.13
RIMKLA-202ENST00000431473 HOOK1Q9UJC3 728 aaKnown RBP14.25□□□□□ -0.13
RIMKLA-202ENST00000431473 NAP1L1P55209 391 aaKnown RBP14.24□□□□□ -0.13
RIMKLA-202ENST00000431473 WASHC2CQ9Y4E1 1318 aa14.24□□□□□ -0.13
RIMKLA-202ENST00000431473 ANKRD20A12PQ8NF67 263 aa14.24□□□□□ -0.13
RIMKLA-202ENST00000431473 LNPKQ9C0E8 428 aa14.24□□□□□ -0.13
RIMKLA-202ENST00000431473 CPLX1O14810 134 aa14.24□□□□□ -0.13
RIMKLA-202ENST00000431473 SMC3Q9UQE7 1217 aa14.24□□□□□ -0.13
RIMKLA-202ENST00000431473 NOM1Q5C9Z4 860 aaKnown RBP14.24□□□□□ -0.13
RIMKLA-202ENST00000431473 RNF214Q8ND24 703 aa14.24□□□□□ -0.13
RIMKLA-202ENST00000431473 IFIT2P09913 472 aaKnown RBP14.23□□□□□ -0.13
RIMKLA-202ENST00000431473 INTS3Q68E01 1043 aaKnown RBP14.23□□□□□ -0.13
RIMKLA-202ENST00000431473 C1orf141Q5JVX7 400 aa14.23□□□□□ -0.13
RIMKLA-202ENST00000431473 PANK1Q8TE04 598 aa14.23□□□□□ -0.13
RIMKLA-202ENST00000431473 MNS1Q8NEH6 495 aa14.22□□□□□ -0.13
RIMKLA-202ENST00000431473 AK7Q96M32 723 aa14.22□□□□□ -0.13
RIMKLA-202ENST00000431473 CALRP27797 417 aaKnown RBP14.22□□□□□ -0.13
RIMKLA-202ENST00000431473 NUCB2P80303 420 aa14.22□□□□□ -0.13
RIMKLA-202ENST00000431473 CCDC39Q9UFE4 941 aa14.22□□□□□ -0.13
RIMKLA-202ENST00000431473 ARGLU1Q9NWB6 273 aaPredicted RBP14.22□□□□□ -0.13
RIMKLA-202ENST00000431473 TCEAL9Q9UHQ7 104 aa14.22□□□□□ -0.13
RIMKLA-202ENST00000431473 SMARCA2P51531 1590 aa14.22□□□□□ -0.13
RIMKLA-202ENST00000431473 COG3Q96JB2 828 aa14.21□□□□□ -0.13
RIMKLA-202ENST00000431473 CHMP4CQ96CF2 233 aa14.21□□□□□ -0.13
RIMKLA-202ENST00000431473 RIPK4P57078 832 aa14.21□□□□□ -0.13
RIMKLA-202ENST00000431473 CAVIN1Q6NZI2 390 aaKnown RBP14.21□□□□□ -0.13
RIMKLA-202ENST00000431473 NFXL1Q6ZNB6 911 aa14.21□□□□□ -0.13
RIMKLA-202ENST00000431473 IL27Q8NEV9 243 aa14.21□□□□□ -0.14
RIMKLA-202ENST00000431473 TTLL5Q6EMB2 1281 aa14.21□□□□□ -0.14
RIMKLA-202ENST00000431473 ROCK1Q13464 1354 aa14.2□□□□□ -0.14
RIMKLA-202ENST00000431473 RBM10P98175 930 aaKnown RBP14.2□□□□□ -0.14
RIMKLA-202ENST00000431473 PDILTQ8N807 584 aa14.2□□□□□ -0.14
RIMKLA-202ENST00000431473 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
RIMKLA-202ENST00000431473 CCDC27Q2M243 656 aa14.2□□□□□ -0.14
RIMKLA-202ENST00000431473 RRP12Q5JTH9 1297 aaKnown RBP14.2□□□□□ -0.14
RIMKLA-202ENST00000431473 EFCAB2Q5VUJ9 269 aa14.2□□□□□ -0.14
RIMKLA-202ENST00000431473 RNF20Q5VTR2 975 aa14.19□□□□□ -0.14
RIMKLA-202ENST00000431473 EVC2Q86UK5 1308 aa14.19□□□□□ -0.14
RIMKLA-202ENST00000431473 NEXNQ0ZGT2 675 aa14.19□□□□□ -0.14
RIMKLA-202ENST00000431473 LRRFIP1Q32MZ4 808 aaKnown RBP14.19□□□□□ -0.14
RIMKLA-202ENST00000431473 HSP90B2PQ58FF3 399 aa14.19□□□□□ -0.14
RIMKLA-202ENST00000431473 CPLX2Q6PUV4 134 aaKnown RBP14.19□□□□□ -0.14
RIMKLA-202ENST00000431473 TRAK2O60296 914 aa14.19□□□□□ -0.14
RIMKLA-202ENST00000431473 MRE11P49959 708 aa14.19□□□□□ -0.14
RIMKLA-202ENST00000431473 MAP7D2Q96T17 732 aa14.18□□□□□ -0.14
RIMKLA-202ENST00000431473 UACAQ9BZF9 1416 aa14.18□□□□□ -0.14
RIMKLA-202ENST00000431473 EID1Q9Y6B2 187 aa14.18□□□□□ -0.14
RIMKLA-202ENST00000431473 TDRD9Q8NDG6 1382 aaKnown RBP14.17□□□□□ -0.14
RIMKLA-202ENST00000431473 TRDNQ13061 729 aa14.17□□□□□ -0.14
RIMKLA-202ENST00000431473 NAT10Q9H0A0 1025 aaKnown RBP14.17□□□□□ -0.14
RIMKLA-202ENST00000431473 KDM4AO75164 1064 aa14.16□□□□□ -0.14
RIMKLA-202ENST00000431473 TEFQ10587 303 aa14.16□□□□□ -0.14
RIMKLA-202ENST00000431473 FKBP5Q13451 457 aaPredicted RBP14.16□□□□□ -0.14
RIMKLA-202ENST00000431473 CCDC73Q6ZRK6 1079 aa14.16□□□□□ -0.14
RIMKLA-202ENST00000431473 CAGE1Q8TC20 777 aa14.16□□□□□ -0.14
RIMKLA-202ENST00000431473 MINK1Q8N4C8 1332 aaPredicted RBP14.16□□□□□ -0.14
RIMKLA-202ENST00000431473 DHX16O60231 1041 aaKnown RBP14.16□□□□□ -0.14
RIMKLA-202ENST00000431473 VPS37DQ86XT2 251 aa14.16□□□□□ -0.14
RIMKLA-202ENST00000431473 SPC24Q8NBT2 197 aa14.16□□□□□ -0.14
RIMKLA-202ENST00000431473 SKIDA1Q1XH10 827 aa14.16□□□□□ -0.14
RIMKLA-202ENST00000431473 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.15□□□□□ -0.14
RIMKLA-202ENST00000431473 AMOTL1Q8IY63 956 aa14.15□□□□□ -0.14
RIMKLA-202ENST00000431473 ACBD3Q9H3P7 528 aa14.15□□□□□ -0.14
RIMKLA-202ENST00000431473 CCDC47Q96A33 483 aaKnown RBP14.14□□□□□ -0.15
RIMKLA-202ENST00000431473 TRIM5Q9C035 493 aa14.14□□□□□ -0.15
RIMKLA-202ENST00000431473 OLFM4Q6UX06 510 aa14.14□□□□□ -0.15
RIMKLA-202ENST00000431473 ERICH2A1L162 156 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms