RNA–Protein interactions for RNA: ENST00000431020.1

LINC00309-201, long intergenic non-protein coding RNA 309, humanhuman

TSL 1 (best) BASIC

Gene LINC00309, Length 3,307 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00309-201ENST00000431020 KCNA6P17658 529 aa8.46□□□□□ -1.06
LINC00309-201ENST00000431020 SETD1BQ9UPS6 1966 aaKnown RBP8.46□□□□□ -1.06
LINC00309-201ENST00000431020 MINK1Q8N4C8 1332 aaPredicted RBP8.45□□□□□ -1.06
LINC00309-201ENST00000431020 AMOTL2Q9Y2J4 779 aa8.45□□□□□ -1.06
LINC00309-201ENST00000431020 PZPP20742 1482 aa8.45□□□□□ -1.06
LINC00309-201ENST00000431020 CROCC2H7BZ55 1655 aa8.44□□□□□ -1.06
LINC00309-201ENST00000431020 SOX12O15370 315 aa8.44□□□□□ -1.06
LINC00309-201ENST00000431020 NOS1P29475 1434 aa8.44□□□□□ -1.06
LINC00309-201ENST00000431020 ERVK-7P63135 1459 aa8.44□□□□□ -1.06
LINC00309-201ENST00000431020 DDX17Q92841 729 aaKnown RBP8.44□□□□□ -1.06
LINC00309-201ENST00000431020 CARD11Q9BXL7 1154 aa8.43□□□□□ -1.06
LINC00309-201ENST00000431020 PLXNC1O60486 1568 aa8.43□□□□□ -1.06
LINC00309-201ENST00000431020 AGLP35573 1532 aa8.43□□□□□ -1.06
LINC00309-201ENST00000431020 ZBTB7CA1YPR0 619 aa8.43□□□□□ -1.06
LINC00309-201ENST00000431020 C3P01024 1663 aa8.43□□□□□ -1.06
LINC00309-201ENST00000431020 DMRT2Q9Y5R5 561 aa8.42□□□□□ -1.06
LINC00309-201ENST00000431020 TMEM2Q9UHN6 1383 aa8.42□□□□□ -1.06
LINC00309-201ENST00000431020 RIMS2Q9UQ26 1411 aa8.42□□□□□ -1.06
LINC00309-201ENST00000431020 KLHL34Q8N239 644 aa8.42□□□□□ -1.06
LINC00309-201ENST00000431020 TMC1Q8TDI8 760 aa8.42□□□□□ -1.06
LINC00309-201ENST00000431020 NBPF8Q3BBV2 869 aa8.41□□□□□ -1.06
LINC00309-201ENST00000431020 LMTK3Q96Q04 1460 aa8.41□□□□□ -1.06
LINC00309-201ENST00000431020 MAST1Q9Y2H9 1570 aa8.41□□□□□ -1.06
LINC00309-201ENST00000431020 CAMSAP1Q5T5Y3 1602 aa8.41□□□□□ -1.06
LINC00309-201ENST00000431020 ADAMTSL3P82987 1691 aa8.41□□□□□ -1.06
LINC00309-201ENST00000431020 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.41□□□□□ -1.06
LINC00309-201ENST00000431020 PRAM1Q96QH2 718 aa8.41□□□□□ -1.06
LINC00309-201ENST00000431020 ANKRD30BQ9BXX2 1392 aa8.41□□□□□ -1.06
LINC00309-201ENST00000431020 PLA2R1Q13018 1463 aa8.41□□□□□ -1.06
LINC00309-201ENST00000431020 PMFBP1Q8TBY8 1022 aa8.41□□□□□ -1.06
LINC00309-201ENST00000431020 SRPK2P78362 688 aaKnown RBP8.4□□□□□ -1.06
LINC00309-201ENST00000431020 PAK3O75914 559 aaPredicted RBP8.4□□□□□ -1.07
LINC00309-201ENST00000431020 MROH1Q8NDA8 1641 aa8.39□□□□□ -1.07
LINC00309-201ENST00000431020 NUTM2GQ5VZR2 741 aa8.39□□□□□ -1.07
LINC00309-201ENST00000431020 ARXQ96QS3 562 aa8.39□□□□□ -1.07
LINC00309-201ENST00000431020 ATF3P18847 181 aa8.39□□□□□ -1.07
LINC00309-201ENST00000431020 ESCO1Q5FWF5 840 aa8.38□□□□□ -1.07
LINC00309-201ENST00000431020 EFCAB6Q5THR3 1501 aa8.38□□□□□ -1.07
LINC00309-201ENST00000431020 METP08581 1390 aa8.38□□□□□ -1.07
LINC00309-201ENST00000431020 E9PCH4 1651 aa8.38□□□□□ -1.07
LINC00309-201ENST00000431020 NUTM2BA6NNL0 878 aaPredicted RBP8.37□□□□□ -1.07
LINC00309-201ENST00000431020 NUTM2EB1AL46 878 aaPredicted RBP8.37□□□□□ -1.07
LINC00309-201ENST00000431020 FOXO3O43524 673 aa8.37□□□□□ -1.07
LINC00309-201ENST00000431020 NUTM2AQ8IVF1 878 aaPredicted RBP8.37□□□□□ -1.07
LINC00309-201ENST00000431020 ROCK2O75116 1388 aaKnown RBP8.37□□□□□ -1.07
LINC00309-201ENST00000431020 NPHP4O75161 1426 aaPredicted RBP8.37□□□□□ -1.07
LINC00309-201ENST00000431020 A2ML1A8K2U0 1454 aa8.37□□□□□ -1.07
LINC00309-201ENST00000431020 HAP1P54257 671 aaPredicted RBP8.36□□□□□ -1.07
LINC00309-201ENST00000431020 CERKQ8TCT0 537 aa8.36□□□□□ -1.07
LINC00309-201ENST00000431020 CABP2Q9NPB3 220 aa8.36□□□□□ -1.07
LINC00309-201ENST00000431020 CEP170BQ9Y4F5 1589 aaPredicted RBP8.36□□□□□ -1.07
LINC00309-201ENST00000431020 ST20-MTHFSA0A0A6YYL1 179 aa8.36□□□□□ -1.07
LINC00309-201ENST00000431020 ATXN8OSP0DMR3 200 aa8.36□□□□□ -1.07
LINC00309-201ENST00000431020 PIK3C2BO00750 1634 aa8.36□□□□□ -1.07
LINC00309-201ENST00000431020 SCAF11Q99590 1463 aaKnown RBP8.35□□□□□ -1.07
LINC00309-201ENST00000431020 TMEM94Q12767 1356 aa8.35□□□□□ -1.07
LINC00309-201ENST00000431020 HRCP23327 699 aa8.35□□□□□ -1.07
LINC00309-201ENST00000431020 ORAI2Q96SN7 254 aa8.35□□□□□ -1.07
LINC00309-201ENST00000431020 GCC2Q8IWJ2 1684 aa8.35□□□□□ -1.07
LINC00309-201ENST00000431020 SYNMO15061 1565 aa8.35□□□□□ -1.07
LINC00309-201ENST00000431020 NLRP1Q9C000 1473 aa8.34□□□□□ -1.07
LINC00309-201ENST00000431020 PREX1Q8TCU6 1659 aa8.34□□□□□ -1.07
LINC00309-201ENST00000431020 MSH5O43196 834 aa8.34□□□□□ -1.07
LINC00309-201ENST00000431020 TNNT2P45379 298 aaPredicted RBP8.34□□□□□ -1.07
LINC00309-201ENST00000431020 RNF17Q9BXT8 1623 aaKnown RBP8.33□□□□□ -1.08
LINC00309-201ENST00000431020 ARHGAP31Q2M1Z3 1444 aa8.33□□□□□ -1.08
LINC00309-201ENST00000431020 ILDR1Q86SU0 546 aaPredicted RBP8.33□□□□□ -1.08
LINC00309-201ENST00000431020 NGDNQ8NEJ9 315 aaKnown RBP8.33□□□□□ -1.08
LINC00309-201ENST00000431020 EIF2AK4Q9P2K8 1649 aaKnown RBP8.33□□□□□ -1.08
LINC00309-201ENST00000431020 PLEKHH1Q9ULM0 1364 aa8.33□□□□□ -1.08
LINC00309-201ENST00000431020 TET3O43151 1660 aa8.33□□□□□ -1.08
LINC00309-201ENST00000431020 MYO5BQ9ULV0 1848 aa8.33□□□□□ -1.08
LINC00309-201ENST00000431020 TOM1O60784 492 aa8.33□□□□□ -1.08
LINC00309-201ENST00000431020 REREQ9P2R6 1566 aa8.33□□□□□ -1.08
LINC00309-201ENST00000431020 CLTCL1P53675 1640 aa8.33□□□□□ -1.08
LINC00309-201ENST00000431020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.32□□□□□ -1.08
LINC00309-201ENST00000431020 TBX22Q9Y458 520 aa8.32□□□□□ -1.08
LINC00309-201ENST00000431020 IQGAP3Q86VI3 1631 aa8.32□□□□□ -1.08
LINC00309-201ENST00000431020 ADAMTS2O95450 1211 aa8.32□□□□□ -1.08
LINC00309-201ENST00000431020 UNC13BO14795 1591 aa8.32□□□□□ -1.08
LINC00309-201ENST00000431020 MYO3AQ8NEV4 1616 aa8.32□□□□□ -1.08
LINC00309-201ENST00000431020 SENP3-EIF4A1A0A087X0R7 540 aa8.31□□□□□ -1.08
LINC00309-201ENST00000431020 C14orf93Q9H972 538 aaKnown RBP8.31□□□□□ -1.08
LINC00309-201ENST00000431020 RPRD2Q5VT52 1461 aaKnown RBP8.31□□□□□ -1.08
LINC00309-201ENST00000431020 CABLES1Q8TDN4 633 aa8.31□□□□□ -1.08
LINC00309-201ENST00000431020 SLAIN2Q9P270 581 aa8.31□□□□□ -1.08
LINC00309-201ENST00000431020 PPM1GO15355 546 aaPredicted RBP8.3□□□□□ -1.08
LINC00309-201ENST00000431020 PTPRTO14522 1441 aa8.3□□□□□ -1.08
LINC00309-201ENST00000431020 A0A0G2JS52 829 aa8.3□□□□□ -1.08
LINC00309-201ENST00000431020 PSME1Q06323 249 aa8.3□□□□□ -1.08
LINC00309-201ENST00000431020 SPATA31D1Q6ZQQ2 1576 aa8.3□□□□□ -1.08
LINC00309-201ENST00000431020 ROBO2Q9HCK4 1378 aa8.3□□□□□ -1.08
LINC00309-201ENST00000431020 RPGRIP1LQ68CZ1 1315 aa8.29□□□□□ -1.08
LINC00309-201ENST00000431020 C19orf44Q9H6X5 657 aa8.29□□□□□ -1.08
LINC00309-201ENST00000431020 DEPDC5O75140 1603 aa8.29□□□□□ -1.08
LINC00309-201ENST00000431020 HSPA5P11021 654 aaKnown RBP8.29□□□□□ -1.08
LINC00309-201ENST00000431020 CDK19Q9BWU1 502 aa8.29□□□□□ -1.08
LINC00309-201ENST00000431020 MSH6P52701 1360 aa8.29□□□□□ -1.08
LINC00309-201ENST00000431020 SPHKAPQ2M3C7 1700 aa8.29□□□□□ -1.08
LINC00309-201ENST00000431020 HSPA1LP34931 641 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms