RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 MAST1Q9Y2H9 1570 aa14.6□□□□□ -0.07
PTCH1-208ENST00000430669 WDR7Q9Y4E6 1490 aa14.6□□□□□ -0.07
PTCH1-208ENST00000430669 MAPKBP1O60336 1514 aa14.6□□□□□ -0.07
PTCH1-208ENST00000430669 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
PTCH1-208ENST00000430669 SHROOM2Q13796 1616 aa14.59□□□□□ -0.07
PTCH1-208ENST00000430669 ARHGEF5Q12774 1597 aa14.59□□□□□ -0.07
PTCH1-208ENST00000430669 PTMSP20962 102 aa14.59□□□□□ -0.07
PTCH1-208ENST00000430669 HSCBQ8IWL3 235 aa14.59□□□□□ -0.07
PTCH1-208ENST00000430669 STK31Q9BXU1 1019 aa14.59□□□□□ -0.07
PTCH1-208ENST00000430669 SENP3-EIF4A1A0A087X0R7 540 aa14.59□□□□□ -0.07
PTCH1-208ENST00000430669 AMPHP49418 695 aa14.59□□□□□ -0.07
PTCH1-208ENST00000430669 NUP160Q12769 1436 aa14.58□□□□□ -0.07
PTCH1-208ENST00000430669 ARHGEF12Q9NZN5 1544 aa14.58□□□□□ -0.07
PTCH1-208ENST00000430669 ITPRIPQ8IWB1 547 aa14.58□□□□□ -0.08
PTCH1-208ENST00000430669 NUTM2DQ5VT03 806 aaPredicted RBP14.58□□□□□ -0.08
PTCH1-208ENST00000430669 PREX2Q70Z35 1606 aa14.58□□□□□ -0.08
PTCH1-208ENST00000430669 ZNF518AQ6AHZ1 1483 aa14.57□□□□□ -0.08
PTCH1-208ENST00000430669 ADCY10Q96PN6 1610 aa14.57□□□□□ -0.08
PTCH1-208ENST00000430669 HSP90AB1P08238 724 aaKnown RBP14.57□□□□□ -0.08
PTCH1-208ENST00000430669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.57□□□□□ -0.08
PTCH1-208ENST00000430669 HMMRO75330 724 aa14.57□□□□□ -0.08
PTCH1-208ENST00000430669 TEX14Q8IWB6 1497 aa14.57□□□□□ -0.08
PTCH1-208ENST00000430669 CENPQQ7L2Z9 268 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-208ENST00000430669 CROCC2H7BZ55 1655 aa14.56□□□□□ -0.08
PTCH1-208ENST00000430669 SOX12O15370 315 aa14.56□□□□□ -0.08
PTCH1-208ENST00000430669 DISP1Q96F81 1524 aa14.55□□□□□ -0.08
PTCH1-208ENST00000430669 GPATCH3Q96I76 525 aa14.55□□□□□ -0.08
PTCH1-208ENST00000430669 RUNDC1Q96C34 613 aa14.55□□□□□ -0.08
PTCH1-208ENST00000430669 RRP1P56182 461 aaKnown RBP14.55□□□□□ -0.08
PTCH1-208ENST00000430669 PLCH2O75038 1416 aa14.55□□□□□ -0.08
PTCH1-208ENST00000430669 CCDC146Q8IYE0 955 aa14.55□□□□□ -0.08
PTCH1-208ENST00000430669 KDM5BQ9UGL1 1544 aa14.55□□□□□ -0.08
PTCH1-208ENST00000430669 RALGAPBQ86X10 1494 aa14.54□□□□□ -0.08
PTCH1-208ENST00000430669 MINK1Q8N4C8 1332 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-208ENST00000430669 TSPOAP1O95153 1857 aa14.53□□□□□ -0.08
PTCH1-208ENST00000430669 DENND4BO75064 1496 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-208ENST00000430669 KDM5AP29375 1690 aaKnown RBP14.53□□□□□ -0.08
PTCH1-208ENST00000430669 POLR1AO95602 1720 aaPredicted RBP14.52□□□□□ -0.09
PTCH1-208ENST00000430669 RBM19Q9Y4C8 960 aaKnown RBP14.52□□□□□ -0.09
PTCH1-208ENST00000430669 DIAPH1O60610 1272 aaKnown RBP14.51□□□□□ -0.09
PTCH1-208ENST00000430669 PPP6R1Q9UPN7 881 aa14.51□□□□□ -0.09
PTCH1-208ENST00000430669 ADGRL2O95490 1459 aa14.51□□□□□ -0.09
PTCH1-208ENST00000430669 NINLQ9Y2I6 1382 aa14.51□□□□□ -0.09
PTCH1-208ENST00000430669 TRIM44Q96DX7 344 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-208ENST00000430669 ARXQ96QS3 562 aa14.5□□□□□ -0.09
PTCH1-208ENST00000430669 ZCCHC11Q5TAX3 1644 aaKnown RBP14.49□□□□□ -0.09
PTCH1-208ENST00000430669 KCNJ4P48050 445 aa14.49□□□□□ -0.09
PTCH1-208ENST00000430669 ATAD2Q6PL18 1390 aa14.49□□□□□ -0.09
PTCH1-208ENST00000430669 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
PTCH1-208ENST00000430669 KIF16BQ96L93 1317 aa14.48□□□□□ -0.09
PTCH1-208ENST00000430669 CSB-PGBD3P0DP91 1061 aa14.48□□□□□ -0.09
PTCH1-208ENST00000430669 SCAF11Q99590 1463 aaKnown RBP14.48□□□□□ -0.09
PTCH1-208ENST00000430669 ZRSR1Q15695 479 aaKnown RBP14.48□□□□□ -0.09
PTCH1-208ENST00000430669 KIAA1211Q6ZU35 1233 aa14.48□□□□□ -0.09
PTCH1-208ENST00000430669 ABCC10Q5T3U5 1492 aa14.48□□□□□ -0.09
PTCH1-208ENST00000430669 ASXL2Q76L83 1435 aa14.48□□□□□ -0.09
PTCH1-208ENST00000430669 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
PTCH1-208ENST00000430669 RTEL1-TNFRSF6BF6WH68 1400 aa14.47□□□□□ -0.09
PTCH1-208ENST00000430669 ABCA8O94911 1581 aa14.47□□□□□ -0.09
PTCH1-208ENST00000430669 SMG6Q86US8 1419 aaKnown RBP14.46□□□□□ -0.1
PTCH1-208ENST00000430669 NPHP1O15259 732 aa14.45□□□□□ -0.1
PTCH1-208ENST00000430669 ATP7AQ04656 1500 aa14.45□□□□□ -0.1
PTCH1-208ENST00000430669 C1orf141Q5JVX7 400 aa14.45□□□□□ -0.1
PTCH1-208ENST00000430669 DDX19BQ9UMR2 479 aa14.45□□□□□ -0.1
PTCH1-208ENST00000430669 LRRIQ1Q96JM4 1722 aa14.44□□□□□ -0.1
PTCH1-208ENST00000430669 A2MP01023 1474 aa14.44□□□□□ -0.1
PTCH1-208ENST00000430669 NBPF8Q3BBV2 869 aa14.44□□□□□ -0.1
PTCH1-208ENST00000430669 FGD1P98174 961 aa14.44□□□□□ -0.1
PTCH1-208ENST00000430669 THEMISQ8N1K5 641 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-208ENST00000430669 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-208ENST00000430669 PSME1Q06323 249 aa14.42□□□□□ -0.1
PTCH1-208ENST00000430669 DHX29Q7Z478 1369 aaKnown RBP14.42□□□□□ -0.1
PTCH1-208ENST00000430669 CFAP70Q5T0N1 1121 aa14.42□□□□□ -0.1
PTCH1-208ENST00000430669 CT47B1P0C2W7 299 aaPredicted RBP14.42□□□□□ -0.1
PTCH1-208ENST00000430669 GNAI1P63096 354 aa14.41□□□□□ -0.1
PTCH1-208ENST00000430669 SPHKAPQ2M3C7 1700 aa14.41□□□□□ -0.1
PTCH1-208ENST00000430669 GBP4Q96PP9 640 aa14.41□□□□□ -0.1
PTCH1-208ENST00000430669 APAF1O14727 1248 aa14.41□□□□□ -0.1
PTCH1-208ENST00000430669 PPP2R1AP30153 589 aa14.4□□□□□ -0.1
PTCH1-208ENST00000430669 IPO9Q96P70 1041 aaKnown RBP14.4□□□□□ -0.1
PTCH1-208ENST00000430669 NSD2O96028 1365 aa14.4□□□□□ -0.1
PTCH1-208ENST00000430669 RIPK4P57078 832 aa14.4□□□□□ -0.1
PTCH1-208ENST00000430669 L1TD1Q5T7N2 865 aaKnown RBP14.4□□□□□ -0.1
PTCH1-208ENST00000430669 GPRASP1Q5JY77 1395 aa14.4□□□□□ -0.1
PTCH1-208ENST00000430669 ASXL1Q8IXJ9 1541 aa14.39□□□□□ -0.11
PTCH1-208ENST00000430669 FAM161AQ3B820 660 aa14.39□□□□□ -0.11
PTCH1-208ENST00000430669 NBPF1Q3BBV0 1214 aa14.39□□□□□ -0.11
PTCH1-208ENST00000430669 RRP7AQ9Y3A4 280 aaKnown RBP14.38□□□□□ -0.11
PTCH1-208ENST00000430669 CABP2Q9NPB3 220 aa14.38□□□□□ -0.11
PTCH1-208ENST00000430669 CDC42BPBQ9Y5S2 1711 aa14.38□□□□□ -0.11
PTCH1-208ENST00000430669 PTPRKQ15262 1439 aa14.38□□□□□ -0.11
PTCH1-208ENST00000430669 PRAM1Q96QH2 718 aa14.38□□□□□ -0.11
PTCH1-208ENST00000430669 API5Q9BZZ5 524 aaKnown RBP14.38□□□□□ -0.11
PTCH1-208ENST00000430669 RAPGEF3O95398 923 aa14.37□□□□□ -0.11
PTCH1-208ENST00000430669 GOLGA6L6A8MZA4 724 aa14.37□□□□□ -0.11
PTCH1-208ENST00000430669 TMEM132EQ6IEE7 984 aa14.37□□□□□ -0.11
PTCH1-208ENST00000430669 KDM5DQ9BY66 1539 aa14.37□□□□□ -0.11
PTCH1-208ENST00000430669 UHRF1BP1LA0JNW5 1464 aa14.37□□□□□ -0.11
PTCH1-208ENST00000430669 PRAG1Q86YV5 1406 aa14.36□□□□□ -0.11
PTCH1-208ENST00000430669 ATF3P18847 181 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms